Contig 001063:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF011P16+                                                           GAGTTGGGATG
                      ____________________________________________________________
consensus                                                              GAGTTGGGATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF011P16+          GGATCGGGCTCCATCTGTACCACTCAAGAAGTTTGTGCTGTTGGACGGGGTCAGGCTACA
                      ____________________________________________________________
consensus             GGATCGGGCTCCATCTGTACCACTCAAGAAGTTTGTGCTGTTGGACGGGGTCAGGCTACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF011P16+          GCTGTATACAAGGTGTCATCTTTTGCTGAGGGAAGTGGTATTCCCATCATTGCTGATGGT
                      ____________________________________________________________
consensus             GCTGTATACAAGGTGTCATCTTTTGCTGAGGGAAGTGGTATTCCCATCATTGCTGATGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF011P16+          GGAATTAAGAATTCTGGCCACTTTGTTAAAGCTTTAGCCCTAGGGGCATCGACTGTGATG
                      ____________________________________________________________
consensus             GGAATTAAGAATTCTGGCCACTTTGTTAAAGCTTTAGCCCTAGGGGCATCGACTGTGATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF011P16+          ATGGGAAGCTTCTTAGCTGGAAGCAGTGAAGCTCCTGGTACTTATGAATATACTAAGGAT
                      ____________________________________________________________
consensus             ATGGGAAGCTTCTTAGCTGGAAGCAGTGAAGCTCCTGGTACTTATGAATATACTAAGGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF011P16+          GGTCTGCGAGTGAAACGATATCGAGGGATGGGATCATTAGATGCAATGACTAAGGGAAGT
                      ____________________________________________________________
consensus             GGTCTGCGAGTGAAACGATATCGAGGGATGGGATCATTAGATGCAATGACTAAGGGAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001M04+                           TGATAAAGCAAAGTTAAAAATTGCTCAGGGGGTTGNTGGAACA
rJMFF011P16+          GATGCAAGATATTTGGGTGATAAAGCAAAGTTAAAAATTGCTCAGGGGGTTGCTGGAACA
                      ____________________________________________________________
consensus             GATGCAAGATATTTGGGTGATAAAGCAAAGTTAAAAATTGCTCAGGGGGTTGCTGGAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001M04+          GTTAAAGACAAGGGTTCTGTTTTGAAGTTTATACCATATANTATGCAAGCCCTAAAGCAA
rJMFF011P16+          GTTAAAGACAAGGGTTCTGTTCTGAAGTTTATACCATATACTATGCAAGCCCTAAAGCAA
                      ____________________________________________________________
consensus             GTTAAAGACAAGGGTTCTGTTTTGAAGTTTATACCATATACTATGCAAGCCCTAAAGCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001M04+          GGATTCCAGGACATCGGTGTTTCGTCCATCCAATCAGCCCATCAGCATTTGAGATCAGGG
rJMFF011P16+          GGATTCCAGGACATCGGTGTTTCGTCCATCCAATCAGCCCATCAGCATTTGAGATCAGGG
                      ____________________________________________________________
consensus             GGATTCCAGGACATCGGTGTTTCGTCCATCCAATCAGCCCATCAGCATTTGAGATCAGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001M04+          GCAACAAGACTAGAGGTTCGGACTGGAGCAGCACAAACTGAAGGTGGAATTCAAGAGGGC
rJMFF011P16+          GCAACAAGACTAGAGGTTCGGACTGGAGCAGCACAAACTGAAGGTGGAATTCAAGAGGGC
                      ____________________________________________________________
consensus             GCAACAAGACTAGAGGTTCGGACTGGAGCAGCACAAACTGAAGGTGGAATTCAAGAGGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001M04+          GGAGCTCATGGACTGGTTTCTTATGAAAAGGGGAAATACTTCTGAAACTGCTCGTGTAGT
rJMFF011P16+          GGAGCTCATGGACTGGTTTCTTATGAAAAGGGGAAATACTTCTGAAACTGCTCGTGTAGT
                      ____________________________________________________________
consensus             GGAGCTCATGGACTGGTTTCTTATGAAAAGGGGAAATACTTCTGAAACTGCTCGTGTAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001M04+          CCATGAACTGCTTGTGTTTGATAGATTTAACAATGGTGTAG                   
rJMFF011P16+          CCATGAACTGCTTGTGTTTGATAGATTTAACAATGGTGTAGACCTTCACATTTCACTAAT
                      ____________________________________________________________
consensus             CCATGAACTGCTTGTGTTTGATAGATTTAACAATGGTGTAGACCTTCACATTTCACTAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF011P16+          AAGTTATTTAGTGTTGTTTGAACAATGTAGTGGTTAAATTATTTGGTTTAAACAGTGAGA
                      ____________________________________________________________
consensus             AAGTTATTTAGTGTTGTTTGAACAATGTAGTGGTTAAATTATTTGGTTTAAACAGTGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF011P16+          ATTAAGCAGACTTTGTTCTTGAACTCTTTCAGTATTTTTTATTTACTGAAAGAAATCAAA
                      ____________________________________________________________
consensus             ATTAAGCAGACTTTGTTCTTGAACTCTTTCAGTATTTTTTATTTACTGAAAGAAATCAAA