| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011D20 | Sequence | 440 | 008776 (3) | ref|XP_004252665.1| | 6e-27 | PREDICTED: serine/threonine-protein kinase HT1-like [Solanum lycopersicum] | 752 | 001057 (3) | ref|XP_007036183.1| | 1e-158 | Kinase superfamily protein isoform 1 [Theobroma cacao] gb|EOY20684.1| Kinase sup |
| JMFF019G24 | Sequence | 524 | 008776 (3) | ref|XP_004252665.1| | 1e-28 | PREDICTED: serine/threonine-protein kinase HT1-like [Solanum lycopersicum] | 658 | 001057 (3) | ref|XP_003527023.1| | 1e-138 | PREDICTED: serine/threonine-protein kinase HT1-like [Glycine max] |
| JMFF035I21 | Sequence | 554 | 008776 (3) | ref|XP_004252665.1| | 1e-33 | PREDICTED: serine/threonine-protein kinase HT1-like [Solanum lycopersicum] | 564 | 001057 (3) | ref|XP_010251291.1| | 5e-120 | PREDICTED: serine/threonine-protein kinase HT1-like [Nelumbo nucifera] |
This contig is upended
. : . : . : . : . : . :
rJMFF011D20+ CAATGGGCACAACAGGGCTCANCATACAGACT
____________________________________________________________
consensus CAATGGGCACAACAGGGCTCANCATACAGACT
. : . : . : . : . : . :
rJMFF011D20+ GACAATGGTCAGATTGGCATGCCGCGTAATGTTTGCTGTGTTGTTGTNGAATATCTTCCT
____________________________________________________________
consensus GACAATGGTCAGATTGGCATGCCGCGTAATGTTTGCTGTGTTGTTGTNGAATATCTTCCT
. : . : . : . : . : . :
rJMFF019G24+ GGGGTACTCTCAAATCTTTCCTTATAAAGAACCGGAGAAGGAAATTGCCTTTTAAAGTT
rJMFF011D20+ GGGGGTACTCTCAAATCTTTCCTTATAAAGAACCGGAGAAGGAAATTGCCTTTTAAAGTT
____________________________________________________________
consensus GGGGGTACTCTCAAATCTTTCCTTATAAAGAACCGGAGAAGGAAATTGCCTTTTAAAGTT
. : . : . : . : . : . :
rJMFF019G24+ GTTGTCCAGCTGGCGCTGGATCTTGCGCGAGGGTTAAGCTATCTTCATTCCAAAAAGATT
rJMFF035I21+ GCGAGGGTTAAGCTATCTTCATTCCAAAAAGATT
rJMFF011D20+ GTTGTCCAGCTGGCGCTGGATCTTGCGCGAGGGTTAAGCTATCTTCATTCCAAAAAGATT
____________________________________________________________
consensus GTTGTCCAGCTGGCGCTGGATCTTGCGCGAGGGTTAAGCTATCTTCATTCCAAAAAGATT
. : . : . : . : . : . :
rJMFF019G24+ GTCCACAGAGATGTGAAAACAGAAAACATGCTTCTTGATAGGCATCGTACTGTAAAAATA
rJMFF035I21+ GTCCACAGAGATGTGAAAACAGAAAACATGCTTCTTGATAGGCATCGTACTGTAAAAATA
rJMFF011D20+ GTCCACAGAGATGTGAAAACAGAAAACATGCTTCTTGATAGGCATCGTACTGTAAAAATA
____________________________________________________________
consensus GTCCACAGAGATGTGAAAACAGAAAACATGCTTCTTGATAGGCATCGTACTGTAAAAATA
. : . : . : . : . : . :
rJMFF019G24+ GCTGATTTTGGTGTTGCTCGCGTTGAAGCTTCAAATCCAAATGACATGACTGGAGAGACA
rJMFF035I21+ GCTGATTTTGGTGTTGCTCGCGTTGAAGCTTCAAATCCAAATGACATGACTGGAGAGACA
rJMFF011D20+ GCTGATTTTGGTGTTGCTCGCGTTGAAGCTTCAAATCCAAATGACATGACTGGAGAGACA
____________________________________________________________
consensus GCTGATTTTGGTGTTGCTCGCGTTGAAGCTTCAAATCCAAATGACATGACTGGAGAGACA
. : . : . : . : . : . :
rJMFF019G24+ GGAACTCTTGGATACATGGCACCCGAGGTTCTTAATGGGAATCCATATAACCGGAAATGC
rJMFF035I21+ GGAACTCTTGGATACATGGCACCCGAGGTTCTTAATGGGAATCCATATAACCGGAAATGC
rJMFF011D20+ GGAACTCTTGGATACATGGCACCCGAGGTTCTTAATGGGAATCCATATAACCGGAAATGC
____________________________________________________________
consensus GGAACTCTTGGATACATGGCACCCGAGGTTCTTAATGGGAATCCATATAACCGGAAATGC
. : . : . : . : . : . :
rJMFF019G24+ GATGTGTATAGCTTTGGCATTTGCCTGTGGGAGATATATTGCTGTGACATGCCATATCCA
rJMFF035I21+ GATGTGTATAGCTTTGGCATTTGCCTGTGGGAGATATATTGCTGTGACATGCCATATCCA
rJMFF011D20+ GATGTGTATAGCTTTGGCATTTGCCTGTGGGAGATATATTGCTGTGACATGCCATATCCA
____________________________________________________________
consensus GATGTGTATAGCTTTGGCATTTGCCTGTGGGAGATATATTGCTGTGACATGCCATATCCA
. : . : . : . : . : . :
rJMFF019G24+ GACCTCAGCTTTTCTGAAGTGACATCAGCTGTTGTTCGCCAGAATCTGAGGCCAGATATA
rJMFF035I21+ GACCTCAGCTTTTCTGAAGTGACATCAGCTGTTGTTCGCCAGAATCTGAGGCCAGATATA
rJMFF011D20+ GACCTCAGCTTTTCTGAAGTGACATCAGCTGTTGTTCGCCAGAATCTGAGGCCAGATATA
____________________________________________________________
consensus GACCTCAGCTTTTCTGAAGTGACATCAGCTGTTGTTCGCCAGAATCTGAGGCCAGATATA
. : . : . : . : . : . :
rJMFF019G24+ CCCCGTTGCTGCCCAAGCTCGTTTGGAAATGTAATGAAACGATGTTGGGATGCCAATCCT
rJMFF035I21+ CCCCGTTGCTGCCCAAGCTCGTTTGGAAATGTAATGAAACGATGTTGGGATGCCAATCCT
rJMFF011D20+ CCCCGTTGCTGCCCAAGCTCGTTTGGAAATGTAATGAAACGATGTTGGGATGCCAATCCT
____________________________________________________________
consensus CCCCGTTGCTGCCCAAGCTCGTTTGGAAATGTAATGAAACGATGTTGGGATGCCAATCCT
. : . : . : . : . : . :
rJMFF019G24+ GACAAGCGGCCTGAGATGGATGAAGTGGTGTCCATGTTGGAAGCAATTGACACCTCGAAG
rJMFF035I21+ GACAAGCGGCCTGAGATGGATGAAGTGGTGTCCATGTTGGAAGCAATTGACACCTCGAAG
rJMFF011D20+ GACAAGCGGCCTGAGATGGATGAAGTGGTGTCCATGTTGGAAGCAATTGACACCTCGAAG
____________________________________________________________
consensus GACAAGCGGCCTGAGATGGATGAAGTGGTGTCCATGTTGGAAGCAATTGACACCTCGAAG
. : . : . : . : . : . :
rJMFF019G24+ GGTGGTGGTATGATCCCTCTTGATCAGCCTCAGGGTTGCTTCTGCTTTCGGAGGTACCGT
rJMFF035I21+ GGTGGTGGTATGATCCCTCTTGATCAGCCTCAGGGTTGCTTCTGCTTTCGGAGGTACCGT
rJMFF011D20+ GGTGGTGGTATGATCCCTCTTGATCAGCCTCAGGGTTGCTTCTGCTTTCGGAGGTACCGT
____________________________________________________________
consensus GGTGGTGGTATGATCCCTCTTGATCAGCCTCAGGGTTGCTTCTGCTTTCGGAGGTACCGT
. : . : . : . : . : . :
rJMFF019G24+ GGTCCTTGAGAAAACTAGCTTGGCCTGACTATGCTTTAGTTGTTAATTGGTGTTTCTAA
rJMFF035I21+ GGTCCTTGAGAAAACTAGCTTGGCCTGACTATGCTTTAGTTGTTAATTGG
rJMFF011D20+ GGTCCTTGAGAAAACTAGCTTGGCCTGACTATGCTTTAGTTGTTAATTGGTGTTTCTAAG
____________________________________________________________
consensus GGTCCTTGAGAAAACTAGCTTGGCCTGACTATGCTTTAGTTGTTAATTGGTGTTTCTAAG