Contig 001054:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF010M15-                                   ATCTTTTCCGGACTTGGCAACAAAAACAATCAACG
                      ____________________________________________________________
consensus                                      ATCTTTTCCGGACTTGGCAACAAAAACAATCAACG
 
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JMFN013O13+                                 AGCAACATACTTAAGCATTAAGCATTAAGCATGGTAAT
JMFF010M15+                    AGGCATCACAATTAGCAACATACTTAAGCATTAAGCATTAAGCATGGTAAT
rJMFF010M15-          CCACCAAGTAGGCATCACAATTAGCAACATACTTAAGCATTAAGCATTAAGCATGGTAAT
                      ____________________________________________________________
consensus             CCACCAAGTAGGCATCACAATTAGCAACATACTTAAGCATTAAGCATTAAGCATGGTAAT
 
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JMFN013O13+           TAGCAACATCATTAAGCATTACATAGCAGCACAAACAATTCAGCAGAATTGAAATTAAAA
JMFF010M15+           TAGCAACATCATTAAGCATTACATAGCAGCACAAACAATTCAGCAGAATTGAAATTAAAA
rJMFF010M15-          TAGCAACATCATTAAGCATTACATAGCAGCACAAACAATTCAGCAGAATTGAAATTAAAA
                      ____________________________________________________________
consensus             TAGCAACATCATTAAGCATTACATAGCAGCACAAACAATTCAGCAGAATTGAAATTAAAA
 
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JMFN013O13+           GGACAGTGGGTTACAAACCCACACTAAATTGATTGTTGTTAACAATTACGAAGAAGCCAA
JMFF010M15+           GGACAGTGGGTTACAAACCCACACTAAATTGATTGTTGTTAACAATTACGAAGAAGCCAA
rJMFF010M15-          GGACAGTGGGTTACAAACCCACACTAAATTGATTGTTGTTAACAATTACGAAGAAGCCAA
                      ____________________________________________________________
consensus             GGACAGTGGGTTACAAACCCACACTAAATTGATTGTTGTTAACAATTACGAAGAAGCCAA
 
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JMFN013O13+           CAGGCCCAAATTAAGGAAAAATTAAAGAAAGAACCAGAAATTGCCAAGCCACTGCAGACG
JMFF010M15+           CAGGCCCAAATTAAGGAAAAATTAAAGAAAGAACCAGAAATTGCCAAGCCACTGCAGACG
rJMFF010M15-          CAGGCCCAAATTAAGGAAAAATTAAAGAAAGAACCAGAAATTGCCAAGCCACTGCAGACG
                      ____________________________________________________________
consensus             CAGGCCCAAATTAAGGAAAAATTAAAGAAAGAACCAGAAATTGCCAAGCCACTGCAGACG
 
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JMFN013O13+           AATTGTTGCTGCCTATT-GGAAGTCGAAGTCGCCGCTGCTAGAAATTAAATCCCAGAACT
JMFF010M15+           AATTGTTGCTGCCTATT-GGAAGTCGAAGTCGCCGCTGCTAGAAATTAAATCCCAGAACT
rJMFF010M15-          AATTGTTGCTGCCTATTGGGAAGTCGAAGTCGCCGCTGCTAGAAATTAAATCCCAGAACT
                      ____________________________________________________________
consensus             AATTGTTGCTGCCTATT-GGAAGTCGAAGTCGCCGCTGCTAGAAATTAAATCCCAGAACT
 
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JMFN013O13+           GCCGAGAAGGATTTTTTGCCAAATTAATCCAACCACCGCCAATAACAGATTTTCCGTCGA
JMFF010M15+           GCCGAGAAGGATTTTTTGCCAAATTAATCCAACCACCGCCAATAACAGATTTTCCGTCGA
rJMFF010M15-          GCCGAGAAGGATTTTTTGCCAAATTAATCCAACCACCGCCAATAACAGATTTTCCGTCGA
                      ____________________________________________________________
consensus             GCCGAGAAGGATTTTTTGCCAAATTAATCCAACCACCGCCAATAACAGATTTTCCGTCGA
 
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JMFN013O13+           AGACTCGCAGCTGCGCCGGGGAAAAATTGCACGCACAGAACAGACTTGCGACGGAAATCG
JMFF010M15+           AGACTCGCAGCTGCGCCGGGGAAAAATTGCACGCACAGAACAGACTTGCGACGGAAATCG
rJMFF010M16-                       CGCCGGGGAAAAATTGCACGCACAGAACAGACTTGCGACGGAAATCG
rJMFF010M15-          AGACTCGCAGCTGCGCCGGGGAAAAATTGCACGCACAGAACAGACTTGCGACGGAAATCG
                      ____________________________________________________________
consensus             AGACTCGCAGCTGCGCCGGGGAAAAATTGCACGCACAGAACAGACTTGCGACGGAAATCG
 
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JMFN013O13+           CACAGCCACTCCCGCTCTTTTGTAATTTTCCGGTGAGAACGATGATGCATCCCCCTTCAA
JMFF010M15+           CACAGCCACTCCCGCTCTTTTGTAATTTTCCGGTGAGAACGATGATGCATCCCCCTTCAA
rJMFF010M16-          CACAGCCACTCCCGCTCTTTTGTAATTTTCCGGNGAGAACGATGATGCATCCCCCTTCAA
rJMFF010M15-          CACAGCCACTCCCGCTCTTTTGTAATTTTCCGGTGAGAACGATGATGCATCCCCCTTCAA
                      ____________________________________________________________
consensus             CACAGCCACTCCCGCTCTTTTGTAATTTTCCGGTGAGAACGATGATGCATCCCCCTTCAA
 
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JMFN013O13+           ACGCACCTCTTTTATACTACTCAGGCTCAACAACTTTTCCGAGCTTCCTCACTAAAACTG
JMFF010M15+           ACGCACCTCTTTTATACTACTCAGGCTCAACAACTTTTCCGAGCTTCCTCACTAAAACTG
rJMFF010M16-          ACGCACCTCTTTTATACTACTCAGGCTCAACAACTTTTCCGAGCTTCCTCACTAAAACTG
rJMFF010M15-          ACGCACCTCTTTTATACTACTCAGGCTCAACAACTTTTCCGAGCTTCCTCACTAAAACTG
                      ____________________________________________________________
consensus             ACGCACCTCTTTTATACTACTCAGGCTCAACAACTTTTCCGAGCTTCCTCACTAAAACTG
 
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JMFN013O13+           CTTCGATCACCAGAGATTCTATCGCTCACGCCTCAATCAGATCTCCCTGAGTTTGTTGAA
JMFF010M15+           CTTCGATCACCAGAGATTCTATCGCTCACGCCTCAATCAGATCTCCCTGAGTTTGTTGAA
rJMFF010M16-          CTTCG                                                       
rJMFF010M15-          CTTCGATCACCAGAGATTCTATCGCTCACGCCTCAATCAGATCTCCCTGAGTTTGTTGAA
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consensus             CTTCGATCACCAGAGATTCTATCGCTCACGCCTCAATCAGATCTCCCTGAGTTTGTTGAA
 
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JMFN013O13+           ACGCGTTTCTGGTGCCTCGGGTTAATCGCCGTTCTG                        
JMFF010M15+           ACGCGTTTCTGGTGCCTCGGGTTAATCGCCGTTCTGCGCCTCTTCCCCTGGTAGTCAGGA
rJMFF010M15-          ACGCGTTTCTGGTGCCTCGGGTTAATCGCCGTTCTGCGCCTCTTCCCCTGGTAGTCAGGA
                      ____________________________________________________________
consensus             ACGCGTTTCTGGTGCCTCGGGTTAATCGCCGTTCTGCGCCTCTTCCCCTGGTAGTCAGGA