Contig 001052:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF009O16-                                                    GAAGAAAATGGGAAGCACA
                      ____________________________________________________________
consensus                                                      GAAGAAAATGGGAAGCACA
 
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JMFF009O16-           ACCCCAATTTCATATCTAACTCACCAGGAAGCTACGGAGATTGATCACCTGCTGATGGGT
                      ____________________________________________________________
consensus             ACCCCAATTTCATATCTAACTCACCAGGAAGCTACGGAGATTGATCACCTGCTGATGGGT
 
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JMFF009O16-           CCTTTGGGGTTTAGCATAGATCAACTAATGGAATTGGCTGGCTTGAGTATTGCGACTGCA
                      ____________________________________________________________
consensus             CCTTTGGGGTTTAGCATAGATCAACTAATGGAATTGGCTGGCTTGAGTATTGCGACTGCA
 
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JMFF009O16-           ATAGCTGAGGTCTACAATCCAAAGGAATACCGTCGAATTCTTGTGATTTGTGGCCCAGGA
                      ____________________________________________________________
consensus             ATAGCTGAGGTCTACAATCCAAAGGAATACCGTCGAATTCTTGTGATTTGTGGCCCAGGA
 
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JMFF009O16-           AGCAATGGTGGTGATGGTCTTGTAGCTGCTCGACACTTACATTACTTTGGATATGAACTG
                      ____________________________________________________________
consensus             AGCAATGGTGGTGATGGTCTTGTAGCTGCTCGACACTTACATTACTTTGGATATGAACTG
 
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JMFF009O16-           TTTCTATGCTATCCAATGCAAACTCCTAAGCACCCTTATACTGGTCTGGTAACTCAGGGA
rJMFF023B15+                                             TTATACTGGTCTGGTAACTCAGGGA
                      ____________________________________________________________
consensus             TTTCTATGCTATCCAATGCAAACTCCTAAGCACCCTTATACTGGTCTGGTAACTCAGGGA
 
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JMFF009O16-           CCCCTAAG-CCACCTTTTGATGAACTTATTCAGAGATTGGTGTCCCTAAAGAATCCCCGT
rJMFF023B15+          CCCNTAAGCCCACCTTTTGATGAACTTATTCAGAGATTGGTGTCCCTAAAGAATCCCCGT
rJMFF009O16+                           TGATGAACTTATTCAGAGATTGGTGTCCCTAAAGAATCCCCGT
                      ____________________________________________________________
consensus             CCCCTAAGCCCACCTTTTGATGAACTTATTCAGAGATTGGTGTCCCTAAAGAATCCCCGT
 
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JMFF009O16-           GATTCGCATAGGAAGTCACCTGTGATTGTCTCTGTGGACATACCATCCGGATGGCATGTT
rJMFF023B15+          GATTCGCATAGGAAGTCACCTGTGATTGTCTCTGTGGACATACCATCCGGATGGCATGTT
rJMFF009O16+          GATTCGCATAGGAAGTCACCTGTGATTGTCTCTGTGGACATACCATCCGGATGGCATGTT
                      ____________________________________________________________
consensus             GATTCGCATAGGAAGTCACCTGTGATTGTCTCTGTGGACATACCATCCGGATGGCATGTT
 
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JMFF009O16-           GATGGAGGAGATATAAATGGTGAAGGCATTAGGCCTAGCATGCTGGTTTCTTTAACTGCT
rJMFF023B15+          GATGGAGGAGATATAAATGGTGAAGGCATTAGGCCTAGCATGCTGGTTTCTTTAACTGCT
rJMFF009O16+          GATGGAGGAGATATAAATGGTGAAGGCATTAGGCCTAGCATGCTGGTTTCTTTAACTGCT
                      ____________________________________________________________
consensus             GATGGAGGAGATATAAATGGTGAAGGCATTAGGCCTAGCATGCTGGTTTCTTTAACTGCT
 
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JMFF009O16-           CCTAAATTGTGTGCCAAAAGGTTTTATGGTCCACATCACTTTTTA               
rJMFF023B15+          CCTAAATTGTGTGCCAAAAGGTTTTATGGTCCACATCACTTTTTAGGTGGAAGATTCATC
rJMFF009O16+          CCTAAATTGTGTGCCAAAAGGTTTTATGGTCCACATCACTTTTTAGGTGGAAGATTCATC
                      ____________________________________________________________
consensus             CCTAAATTGTGTGCCAAAAGGTTTTATGGTCCACATCACTTTTTAGGTGGAAGATTCATC
 
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rJMFF023B15+          CCACCGTCTATTGTAGACAAATTCAAGCTTGGACTTCCATTGTATCCCGGCACTTCTATG
rJMFF009O16+          CCACCGTCTATTGTAGACAAATTCAAGCTTAGACTTCCATTGTATCCCGGCACTTCTATG
                      ____________________________________________________________
consensus             CCACCGTCTATTGTAGACAAATTCAAGCTTGGACTTCCATTGTATCCCGGCACTTCTATG
 
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rJMFF023B15+          TGTGTGCGAATTGGAAGGCCTCCCGAGATTTATCCACTAGCACTGCTAGGAATGCACGTT
rJMFF009O16+          TGTGTGCGAATTGGAAGGCCTCCCGAGATTTATCCACTAGCACTGCTAGGAATGCACGTT
                      ____________________________________________________________
consensus             TGTGTGCGAATTGGAAGGCCTCCCGAGATTTATCCACTAGCACTGCTAGGAATGCACGTT
 
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rJMFF023B15+          GAGGCAGACCCATTCGATCAGTTCAAGAAATGGTTTGATCATGCATTAGTTGCCGGTGTG
rJMFF009O16+          GAGGCAGACCCATTCGATCAGTTCAAGAAATGGTTTGATCATGCATTAGTTGCCGGTGTG
                      ____________________________________________________________
consensus             GAGGCAGACCCATTCGATCAGTTCAAGAAATGGTTTGATCATGCATTAGTTGCCGGTGTG
 
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rJMFF023B15+          AAGGAACCAAATTATATGGCACTATCAACTGGAACCAAAGATGGAAAACCCTCATCTCGG
rJMFF009O16+          AAGGAACCAAATTATATGGCACTATCAACTGGAACCAAAGATGGAAAACCCTCATCTCGG
                      ____________________________________________________________
consensus             AAGGAACCAAATTATATGGCACTATCAACTGGAACCAAAGATGGAAAACCCTCATCTCGG
 
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rJMFF023B15+          GTGGTTTCTCTAGAAGGAGTTAACAAAGATGGCTTTGTCTGGTACACCAGTTATGAAAGC
rJMFF009O16+          GTGGTTTCTCTAGAAGGAGTTAACAAAGATGGCTTTGTCTGGTACACCAGTTATGAAAGC
                      ____________________________________________________________
consensus             GTGGTTTCTCTAGAAGGAGTTAACAAAGATGGCTTTGTCTGGTACACCAGTTATGAAAGC
 
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rJMFF023B15+          AGGAAGGCTCGTGAAATATCTGAAAATCCACATGCATCACTTCTTTTCTATTGGAGTTGT
rJMFF009O16+          AGGAAGGCTCGTGAAATATCTGAAAATCCACATGCATCACTTCTTTTCTATTGGAGTTGT
                      ____________________________________________________________
consensus             AGGAAGGCTCGTGAAATATCTGAAAATCCACATGCATCACTTCTTTTCTATTGGAGTTGT
 
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rJMFF023B15+          TTAAATTGCCAGGTGCCTGCAGTGTCTTTGCACTCCAATAGGACTATATGATTGCAAAAT
rJMFF009O16+          TTAAATTGCCAGGTGCCTGCAGTGTCTTTGCACTCCAATAGGACTATATGATTGCAAAAT
                      ____________________________________________________________
consensus             TTAAATTGCCAGGTGCCTGCAGTGTCTTTGCACTCCAATAGGACTATATGATTGCAAAAT
 
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rJMFF023B15+          TCTACACAGTACAATTGATGCTGAATGCATATATGAATTGGTGTTGGTTAAGAAAAT   
rJMFF009O16+          TCTACACAGTACAATTGATGCTGAATGCATATATGAATTGGTGTTGGTTAAGAAAATAAT
                      ____________________________________________________________
consensus             TCTACACAGTACAATTGATGCTGAATGCATATATGAATTGGTGTTGGTTAAGAAAATAAT