Contig 001046:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003C02Sequence519005883 (2)ref|XP_009379437.1|3e-70PREDICTED: serine/threonine-protein kinase OXI1-like isoform X2 [Pyrus x bretsc709001046 (3)ref|XP_009618747.1|1e-117PREDICTED: serine/threonine-protein kinase OXI1-like [Nicotiana tomentosiformis
JMFF008E05Sequence788001046 (3)ref|XP_009618747.1|2e-115PREDICTED: serine/threonine-protein kinase OXI1-like [Nicotiana tomentosiformis
JMFF015F21Sequence607005883 (2)ref|XP_008219388.1|6e-81PREDICTED: serine/threonine-protein kinase OXI1-like [Prunus mume]654001046 (3)ref|XP_009758129.1|1e-105PREDICTED: serine/threonine-protein kinase OXI1-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF003C02+ ATGTCGCCTGC
                      ____________________________________________________________
consensus ATGTCGCCTGC
 
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rJMFF003C02+ TCGGAGCCTGAAACGGATTCCGATCTTTCTAGAACCTTCACCCGCTTCGTTTGTCCTAGA
rJMFF008E05+ TGTCCTAGA
                      ____________________________________________________________
consensus TCGGAGCCTGAAACGGATTCCGATCTTTCTAGAACCTTCACCCGCTTCGTTTGTCCTAGA
 
. : . : . : . : . : . :
rJMFF003C02+ AAGAAGAAGAACGTTAATAACCAGAAAGGATTAAGGAAAGCAAAGAGCGCACGCGTTTCT
rJMFF008E05+ AAGAAGAAGAACGTTAATANCCAGAAAGGATTAAGGAAAGCAAAGAGCGCACGCGTTTCT
                      ____________________________________________________________
consensus AAGAAGAAGAACGTTAATAACCAGAAAGGATTAAGGAAAGCAAAGAGCGCACGCGTTTCT
 
. : . : . : . : . : . :
rJMFF003C02+ CCGGTGAGCAGAAGGAACCCGGGATCATTCTACGAGAGCTCCAATTCCTTTGTCGGAACA
rJMFF015F21+ CCGGTGAGCAGAAGGAACCCGGGATCATTNTACGAGCGCTCCAATTCCTTTGTCGGAACA
rJMFF008E05+ CCGGTGAGCAGAAGGAACCCGGGATCATTCTACGAGCGCTCCAATTCCTTTGTCGGAACA
                      ____________________________________________________________
consensus CCGGTGAGCAGAAGGAACCCGGGATCATTCTACGAGCGCTCCAATTCCTTTGTCGGAACA
 
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rJMFF003C02+ GAGGAATACGTCGCGCCGGAAGTTGTGAGAGGAGACGGCCACGAATTCTCCGTCGACTGG
rJMFF015F21+ GAGGAATACGTCGCGCCGGAAGTTGTGAGAGGAGACGGCCACGAATTCTCCGTCGACTGG
rJMFF008E05+ GAGGAATACGTCGCGCCGGAAGTTGTGAGAGGAGACGGCCACGAATTCTCCGTCGACTGG
                      ____________________________________________________________
consensus GAGGAATACGTCGCGCCGGAAGTTGTGAGAGGAGACGGCCACGAATTCTCCGTCGACTGG
 
. : . : . : . : . : . :
rJMFF003C02+ TGGGCTCTCGGAGTGCTCTGCTACGAAATGCTGTACGGAAAGACGCCGTTCCGGGGAAAG
rJMFF015F21+ TGGGCTCTCGGAGTGCTCTGCTACGAAATGCTGTACGGAAAGACGCCGTTCCGGGGAAAG
rJMFF008E05+ TGGGCTCTCGGAGTGCTCTGCTACGAAATGCTGTACGGAAAGACGCCGTTCCGGGGAAAG
                      ____________________________________________________________
consensus TGGGCTCTCGGAGTGCTCTGCTACGAAATGCTGTACGGAAAGACGCCGTTCCGGGGAAAG
 
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rJMFF003C02+ AACAGAAAGGATACGTTCAAGAGAATCTTGATGATGCAGCCGGAGTTCATGGGAAAGCAG
rJMFF015F21+ AACAGAAAGGATACGTTCAAGAGAATCTTGATGATGCAGCCGGAGTTCATGGGAAAGCAG
rJMFF008E05+ AACAGAAAGGATACGTTCAAGAGAATCTTGATGATGCAGCCGGAGTTCATGGGAAAGCAG
                      ____________________________________________________________
consensus AACAGAAAGGATACGTTCAAGAGAATCTTGATGATGCAGCCGGAGTTCATGGGAAAGCAG
 
. : . : . : . : . : . :
rJMFF003C02+ CCAAACGCCTTAACGGACTTGATCGGAAAGTTGCTGGAGAAGGACCCCACGCGCCGGCTG
rJMFF015F21+ CCAAACGCCTTAACGGACTTGATCGGAAAGTTGCTGGAGAAGGACCCCACGCGCCGGCTG
rJMFF008E05+ CCAAACGCCTTAACGGACTTGATCGGAAAGTTGCTGGAGAAGGACCCCACGCGCCGGCTG
                      ____________________________________________________________
consensus CCAAACGCCTTAACGGACTTGATCGGAAAGTTGCTGGAGAAGGACCCCACGCGCCGGCTG
 
. : . : . : . : . : . :
rJMFF003C02+ GGTTACCGGAGAGGCGCGTCAGAGATCAAGGAGCACGAGTTCTTCCGTGGGCTGAGGTGG
rJMFF015F21+ GGTTACCGGAGAGGCGCGTCAGAGATCAAGGAGCACGAGTTCTTCCGTGGGCTGAGGTGG
rJMFF008E05+ GGTTACCGGAGAGGCGCGTCAGAGATCAAGGAGCACGAGTTCTTCCGTGGGCTGAGGTGG
                      ____________________________________________________________
consensus GGTTACCGGAGAGGCGCGTCAGAGATCAAGGAGCACGAGTTCTTCCGTGGGCTGAGGTGG
 
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rJMFF003C02+ GATTTGCTGACGGAAGTTGTACGGCCGCCGTTTCTGCCGTCGAAAGACGAGACGGAGCTG
rJMFF015F21+ GATTTGCTGACGGAAGTTGTACGGCCGCCGTTTCTGCCGTCGAAAGACGAGACGGAGCTG
rJMFF008E05+ GATTTGCTGACGGAAGTTGTACGGCCGCCGTTTCTGCCGTCGAAAGACGAGACGGAGCTG
                      ____________________________________________________________
consensus GATTTGCTGACGGAAGTTGTACGGCCGCCGTTTCTGCCGTCGAAAGACGAGACGGAGCTG
 
. : . : . : . : . : . :
rJMFF003C02+ ACGGAGGAAGTGAAGAAAGGCGGGATTGACATCCGGGATTACTTCGACAAATTGAAGGCT
rJMFF015F21+ ACGGAGGAAGTGAAGAAAGGCGGGATTGACATCCGGGATTACTTCGACAAATTGAAGGCT
rJMFF008E05+ ACGGAGGAAGTGAAGAAAGGCGGGATTGACATCCGGGATTACTTCGACAAATTGAAGGCT
                      ____________________________________________________________
consensus ACGGAGGAAGTGAAGAAAGGCGGGATTGACATCCGGGATTACTTCGACAAATTGAAGGCT
 
. : . : . : . : . : . :
rJMFF003C02+ CCGTCGTCACCGTTATGGTCGCCGTCACTGGATGAGCAAAGACATAACGTTTCGCTAACG
rJMFF015F21+ CCGTCGTCACCGTTATGGTCGCCGTCACTGGATGAGCAAAGACATAACGTTTCGCTAACG
rJMFF008E05+ CCGTCGTCACCGTTATGGTCGCCGTCACTGGATGAGCAAAGACATAACGTTTCGCTAACG
                      ____________________________________________________________
consensus CCGTCGTCACCGTTATGGTCGCCGTCACTGGATGAGCAAAGACATAACGTTTCGCTAACG
 
. : . : . : . : . : . :
rJMFF003C02+ GAGTTCTAACTCACGTGTAAAGAGTGTTGGATCATTAA
rJMFF015F21+ GAGTTCTAACTCACGTGTAAAGAGTGTTGGATCATTAATGTTATTTTCTATTTTTATTTT
rJMFF008E05+ GAGTTCTAACTCACGTGTAAAGAGTGTTGGATCATTAATGTTATTTTCTATTTTTA-TTT
                      ____________________________________________________________
consensus GAGTTCTAACTCACGTGTAAAGAGTGTTGGATCATTAATGTTATTTTCTATTTTTATTTT
 
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rJMFF015F21+ TTTAAAAAAGTAGATTAATGTAAATAAAATAATTGTAGGACTTGATAAACGGCG
rJMFF008E05+ TTTAAAAAAGTAGATTAATGTAAATAAAATAATTGTAGGACTTGATAAACGGCGTTATTT
                      ____________________________________________________________
consensus TTTAAAAAAGTAGATTAATGTAAATAAAATAATTGTAGGACTTGATAAACGGCGTTATTT
 
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rJMFF008E05+ AAGAATTGCTGTTAGCGATTATAGAAACATAATGATTAAACAGTCATAATGTATTTTAAC
                      ____________________________________________________________
consensus AAGAATTGCTGTTAGCGATTATAGAAACATAATGATTAAACAGTCATAATGTATTTTAAC