| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003C02 | Sequence | 519 | 005883 (2) | ref|XP_009379437.1| | 3e-70 | PREDICTED: serine/threonine-protein kinase OXI1-like isoform X2 [Pyrus x bretsc | 709 | 001046 (3) | ref|XP_009618747.1| | 1e-117 | PREDICTED: serine/threonine-protein kinase OXI1-like [Nicotiana tomentosiformis |
| JMFF008E05 | Sequence | 788 | 001046 (3) | ref|XP_009618747.1| | 2e-115 | PREDICTED: serine/threonine-protein kinase OXI1-like [Nicotiana tomentosiformis | |||||
| JMFF015F21 | Sequence | 607 | 005883 (2) | ref|XP_008219388.1| | 6e-81 | PREDICTED: serine/threonine-protein kinase OXI1-like [Prunus mume] | 654 | 001046 (3) | ref|XP_009758129.1| | 1e-105 | PREDICTED: serine/threonine-protein kinase OXI1-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMFF003C02+ ATGTCGCCTGC
____________________________________________________________
consensus ATGTCGCCTGC
. : . : . : . : . : . :
rJMFF003C02+ TCGGAGCCTGAAACGGATTCCGATCTTTCTAGAACCTTCACCCGCTTCGTTTGTCCTAGA
rJMFF008E05+ TGTCCTAGA
____________________________________________________________
consensus TCGGAGCCTGAAACGGATTCCGATCTTTCTAGAACCTTCACCCGCTTCGTTTGTCCTAGA
. : . : . : . : . : . :
rJMFF003C02+ AAGAAGAAGAACGTTAATAACCAGAAAGGATTAAGGAAAGCAAAGAGCGCACGCGTTTCT
rJMFF008E05+ AAGAAGAAGAACGTTAATANCCAGAAAGGATTAAGGAAAGCAAAGAGCGCACGCGTTTCT
____________________________________________________________
consensus AAGAAGAAGAACGTTAATAACCAGAAAGGATTAAGGAAAGCAAAGAGCGCACGCGTTTCT
. : . : . : . : . : . :
rJMFF003C02+ CCGGTGAGCAGAAGGAACCCGGGATCATTCTACGAGAGCTCCAATTCCTTTGTCGGAACA
rJMFF015F21+ CCGGTGAGCAGAAGGAACCCGGGATCATTNTACGAGCGCTCCAATTCCTTTGTCGGAACA
rJMFF008E05+ CCGGTGAGCAGAAGGAACCCGGGATCATTCTACGAGCGCTCCAATTCCTTTGTCGGAACA
____________________________________________________________
consensus CCGGTGAGCAGAAGGAACCCGGGATCATTCTACGAGCGCTCCAATTCCTTTGTCGGAACA
. : . : . : . : . : . :
rJMFF003C02+ GAGGAATACGTCGCGCCGGAAGTTGTGAGAGGAGACGGCCACGAATTCTCCGTCGACTGG
rJMFF015F21+ GAGGAATACGTCGCGCCGGAAGTTGTGAGAGGAGACGGCCACGAATTCTCCGTCGACTGG
rJMFF008E05+ GAGGAATACGTCGCGCCGGAAGTTGTGAGAGGAGACGGCCACGAATTCTCCGTCGACTGG
____________________________________________________________
consensus GAGGAATACGTCGCGCCGGAAGTTGTGAGAGGAGACGGCCACGAATTCTCCGTCGACTGG
. : . : . : . : . : . :
rJMFF003C02+ TGGGCTCTCGGAGTGCTCTGCTACGAAATGCTGTACGGAAAGACGCCGTTCCGGGGAAAG
rJMFF015F21+ TGGGCTCTCGGAGTGCTCTGCTACGAAATGCTGTACGGAAAGACGCCGTTCCGGGGAAAG
rJMFF008E05+ TGGGCTCTCGGAGTGCTCTGCTACGAAATGCTGTACGGAAAGACGCCGTTCCGGGGAAAG
____________________________________________________________
consensus TGGGCTCTCGGAGTGCTCTGCTACGAAATGCTGTACGGAAAGACGCCGTTCCGGGGAAAG
. : . : . : . : . : . :
rJMFF003C02+ AACAGAAAGGATACGTTCAAGAGAATCTTGATGATGCAGCCGGAGTTCATGGGAAAGCAG
rJMFF015F21+ AACAGAAAGGATACGTTCAAGAGAATCTTGATGATGCAGCCGGAGTTCATGGGAAAGCAG
rJMFF008E05+ AACAGAAAGGATACGTTCAAGAGAATCTTGATGATGCAGCCGGAGTTCATGGGAAAGCAG
____________________________________________________________
consensus AACAGAAAGGATACGTTCAAGAGAATCTTGATGATGCAGCCGGAGTTCATGGGAAAGCAG
. : . : . : . : . : . :
rJMFF003C02+ CCAAACGCCTTAACGGACTTGATCGGAAAGTTGCTGGAGAAGGACCCCACGCGCCGGCTG
rJMFF015F21+ CCAAACGCCTTAACGGACTTGATCGGAAAGTTGCTGGAGAAGGACCCCACGCGCCGGCTG
rJMFF008E05+ CCAAACGCCTTAACGGACTTGATCGGAAAGTTGCTGGAGAAGGACCCCACGCGCCGGCTG
____________________________________________________________
consensus CCAAACGCCTTAACGGACTTGATCGGAAAGTTGCTGGAGAAGGACCCCACGCGCCGGCTG
. : . : . : . : . : . :
rJMFF003C02+ GGTTACCGGAGAGGCGCGTCAGAGATCAAGGAGCACGAGTTCTTCCGTGGGCTGAGGTGG
rJMFF015F21+ GGTTACCGGAGAGGCGCGTCAGAGATCAAGGAGCACGAGTTCTTCCGTGGGCTGAGGTGG
rJMFF008E05+ GGTTACCGGAGAGGCGCGTCAGAGATCAAGGAGCACGAGTTCTTCCGTGGGCTGAGGTGG
____________________________________________________________
consensus GGTTACCGGAGAGGCGCGTCAGAGATCAAGGAGCACGAGTTCTTCCGTGGGCTGAGGTGG
. : . : . : . : . : . :
rJMFF003C02+ GATTTGCTGACGGAAGTTGTACGGCCGCCGTTTCTGCCGTCGAAAGACGAGACGGAGCTG
rJMFF015F21+ GATTTGCTGACGGAAGTTGTACGGCCGCCGTTTCTGCCGTCGAAAGACGAGACGGAGCTG
rJMFF008E05+ GATTTGCTGACGGAAGTTGTACGGCCGCCGTTTCTGCCGTCGAAAGACGAGACGGAGCTG
____________________________________________________________
consensus GATTTGCTGACGGAAGTTGTACGGCCGCCGTTTCTGCCGTCGAAAGACGAGACGGAGCTG
. : . : . : . : . : . :
rJMFF003C02+ ACGGAGGAAGTGAAGAAAGGCGGGATTGACATCCGGGATTACTTCGACAAATTGAAGGCT
rJMFF015F21+ ACGGAGGAAGTGAAGAAAGGCGGGATTGACATCCGGGATTACTTCGACAAATTGAAGGCT
rJMFF008E05+ ACGGAGGAAGTGAAGAAAGGCGGGATTGACATCCGGGATTACTTCGACAAATTGAAGGCT
____________________________________________________________
consensus ACGGAGGAAGTGAAGAAAGGCGGGATTGACATCCGGGATTACTTCGACAAATTGAAGGCT
. : . : . : . : . : . :
rJMFF003C02+ CCGTCGTCACCGTTATGGTCGCCGTCACTGGATGAGCAAAGACATAACGTTTCGCTAACG
rJMFF015F21+ CCGTCGTCACCGTTATGGTCGCCGTCACTGGATGAGCAAAGACATAACGTTTCGCTAACG
rJMFF008E05+ CCGTCGTCACCGTTATGGTCGCCGTCACTGGATGAGCAAAGACATAACGTTTCGCTAACG
____________________________________________________________
consensus CCGTCGTCACCGTTATGGTCGCCGTCACTGGATGAGCAAAGACATAACGTTTCGCTAACG
. : . : . : . : . : . :
rJMFF003C02+ GAGTTCTAACTCACGTGTAAAGAGTGTTGGATCATTAA
rJMFF015F21+ GAGTTCTAACTCACGTGTAAAGAGTGTTGGATCATTAATGTTATTTTCTATTTTTATTTT
rJMFF008E05+ GAGTTCTAACTCACGTGTAAAGAGTGTTGGATCATTAATGTTATTTTCTATTTTTA-TTT
____________________________________________________________
consensus GAGTTCTAACTCACGTGTAAAGAGTGTTGGATCATTAATGTTATTTTCTATTTTTATTTT
. : . : . : . : . : . :
rJMFF015F21+ TTTAAAAAAGTAGATTAATGTAAATAAAATAATTGTAGGACTTGATAAACGGCG
rJMFF008E05+ TTTAAAAAAGTAGATTAATGTAAATAAAATAATTGTAGGACTTGATAAACGGCGTTATTT
____________________________________________________________
consensus TTTAAAAAAGTAGATTAATGTAAATAAAATAATTGTAGGACTTGATAAACGGCGTTATTT
. : . : . : . : . : . :
rJMFF008E05+ AAGAATTGCTGTTAGCGATTATAGAAACATAATGATTAAACAGTCATAATGTATTTTAAC
____________________________________________________________
consensus AAGAATTGCTGTTAGCGATTATAGAAACATAATGATTAAACAGTCATAATGTATTTTAAC