Contig 001045:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004M21Sequence533007396 (6)ref|XP_006342320.1|3e-72PREDICTED: TBCC domain-containing protein 1-like isoform X1 [Solanum tuberosum]714001045 (4)ref|XP_011075175.1|1e-32PREDICTED: TBCC domain-containing protein 1-like [Sesamum indicum]
JMFF008C09Sequence597007396 (6)ref|XP_006342320.1|9e-87PREDICTED: TBCC domain-containing protein 1-like isoform X1 [Solanum tuberosum]743001045 (4)ref|XP_011075175.1|5e-34PREDICTED: TBCC domain-containing protein 1-like [Sesamum indicum]
JMFF018C16Sequence592007396 (6)ref|XP_006342320.1|9e-86PREDICTED: TBCC domain-containing protein 1-like isoform X1 [Solanum tuberosum]742001045 (4)ref|XP_011075175.1|5e-35PREDICTED: TBCC domain-containing protein 1-like [Sesamum indicum]
JMSF003P16Sequence248007396 (6)ref|XP_006342320.1|4e-16PREDICTED: TBCC domain-containing protein 1-like isoform X1 [Solanum tuberosum]710001045 (4)ref|XP_011075175.1|1e-32PREDICTED: TBCC domain-containing protein 1-like [Sesamum indicum]

Alignment

This contig is upended


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rJMFF018C16+                                              GGTTTGAAGCTCAACAATCTGGTT
rJMFF008C09+                                              GGTTNGAAGCTCAACAATCTGNTT
                      ____________________________________________________________
consensus                                                 GGTTTGAAGCTCAACAATCTGGTT
 
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rJMFF018C16+          CCACGAAAGATAACCCTTTTCCCTTGCCAGATGCTTATATGGCTTCTCAGCATAAAAATC
rJMFF004M21+           CACGAAAGATAACCCTTTTCCCTTGCCAGATGCTTATATGGCTTCTCAGCATAAAAATC
rJMSF003P16+           CACGAAAGATAACCCTTTTCCCTTGCCAGATGCTTATATGGCTTCTCAGCATAAAAATC
rJMFF008C09+          CCACGAAAGATAACCCTTTTCCCTTGCCAGATGCTTATATGGCTTCTCAGCATAAAAATC
                      ____________________________________________________________
consensus             CCACGAAAGATAACCCTTTTCCCTTGCCAGATGCTTATATGGCTTCTCAGCATAAAAATC
 
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rJMFF018C16+          ACAAGAATCTTGTGGAGATTAAGCAAATATTGAGGGAAACCGAGCTTGAAGACAGCCGGA
rJMFF004M21+          ACAAGAATCTTGTGGAGATTAAGCAAATATTGAGGGAAACCGAGCTTGAAGACAGCCGGA
rJMSF003P16+          ACAAGAATCTTGTGGAGATTAAGCAAATATTGAGGGAAACCGAGCTTGAAGACAGCCGGA
rJMFF008C09+          ACAAGAATCTTGTGGAGATTAAGCAAATATTGAGGGAAACCGAGCTTGAAGACAGCCGGA
                      ____________________________________________________________
consensus             ACAAGAATCTTGTGGAGATTAAGCAAATATTGAGGGAAACCGAGCTTGAAGACAGCCGGA
 
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rJMFF018C16+          AACGGGAATTGGCTAGTGCTCTCCATGTGCTGTTTAAAGACTGGTTATATGCTTCTGGAA
rJMFF004M21+          AACGGGAATTGGCTAGTGCTCTCCATGTGCTGTTTAAAGACTGGTTATATGCTTCTGGAA
rJMSF003P16+          AACGGGAATTGGCTAGTGCTCTCCATGTGCTGTTTAAAGACTGGTTATATGCTTCTGGAA
rJMFF008C09+          AACGGGAATTGGCTAGTGCTCTCCATGTGCTGTTTAAAGACTGGTTATATGCTTCTGGAA
                      ____________________________________________________________
consensus             AACGGGAATTGGCTAGTGCTCTCCATGTGCTGTTTAAAGACTGGTTATATGCTTCTGGAA
 
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rJMFF018C16+          ATATCAGGCAACTTTACTGCCTACAAGGTGAATAGAAGTGTTGTTGGATGATTTGAAGAG
rJMFF004M21+          ATATCAGGCAACTTTACTGCCTACAAGGTGAATAGAAGTGTTGTTGGATGATTTGAAGAG
rJMSF003P16+          ATATCAGGCAACTTTACTGCCTACAAGGTGAATAGAAGTGTTGTTGGATGATTTGAAGAG
rJMFF008C09+          ATATCAGGCAACTTTACTGCCTACAAGGTGAATAGAAGTGTTGTTGGATGATTTGAAGAG
                      ____________________________________________________________
consensus             ATATCAGGCAACTTTACTGCCTACAAGGTGAATAGAAGTGTTGTTGGATGATTTGAAGAG
 
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rJMFF018C16+          GTCAAAAGGAGGTTTGCAAGTTGAGCATACTTTTGACCACCAATTTAAGTCGCCACACAC
rJMFF004M21+          GTCAAAAGGAGGTTTGCAAGTTGAGCATACTTTTGACCACCAATTTAAGTCGCCACACAC
rJMSF003P16+          GTCAAAAGGAGGTTTGCAAGTTGAGCATACTTTTGACCACCAATTTAAGTCGCCACACAC
rJMFF008C09+          GTCAAAAGGAGGTTTGCAAGTTGAGCATACTTTTGACCACCAATTTAAGTCGCCACACAC
                      ____________________________________________________________
consensus             GTCAAAAGGAGGTTTGCAAGTTGAGCATACTTTTGACCACCAATTTAAGTCGCCACACAC
 
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rJMFF018C16+          TTGTTGTCAATTTTGAATGTGGTGGAGGCAGCCGAGAGTGCGATGCTAGGGTTTGCTGTT
rJMFF004M21+          TTGTTGTCAATTTTGAATGTGGTGGAGGCAGCCGAGAGTGCGATGCTAGGGTTTGCTGTT
rJMSF003P16+          TTGTTGTCAATTTTGAATGTGGTGGAGGCAGCCGAGAGTGCGATGCTAGGGTTTGCTGTT
rJMFF008C09+          TTGTTGTCAATTTTGAATGTGGTGGAGGCAGCCGAGAGTGCGATGCTAGGGTTTGCTGTT
                      ____________________________________________________________
consensus             TTGTTGTCAATTTTGAATGTGGTGGAGGCAGCCGAGAGTGCGATGCTAGGGTTTGCTGTT
 
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rJMFF018C16+          GCAAACAAGCTTTGTCCCTTTGAAACTATCTTGCAGACAGATTATATTTAGTCATGCATC
rJMFF004M21+          GCAAACAAGCTTTGTCCCTTTGAAACTATCTTGCAGACAGATTATATTTAGTCATGCATC
rJMSF003P16+          GCAAACAAGCTTTGTCCCTTTGAAACTATCTTGCAGACAGATTATATTTAGTCATGCATC
rJMFF008C09+          GCAAACAAGCTTTGTCCCTTTGAAACTATCTTGCAGACAGATTATATTTAGTCATGCATC
                      ____________________________________________________________
consensus             GCAAACAAGCTTTGTCCCTTTGAAACTATCTTGCAGACAGATTATATTTAGTCATGCATC
 
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rJMFF018C16+          TGCTAACTTGGTGTAGTTAGTTCCTTTGAAAGTAGTCTCTCTTATGAAATTACGTTCGTG
rJMFF004M21+          TGCTAACTTGGTGTAGTTAGTTCCTTTGAAAGTAGTCTCTCTTATGAAATTACGTTCGTG
rJMSF003P16+          TGCTAACTTGGTGTAGTTAGTTCCTTTGAAAGTAGTCTCTCTTATGAAATTTCGTTCGTG
rJMFF008C09+          TGCTAACTTGGTGTAGTTAGTTCCTTTGAAAGTAGTCTCTCTTATGAAATTACGTTCGTG
                      ____________________________________________________________
consensus             TGCTAACTTGGTGTAGTTAGTTCCTTTGAAAGTAGTCTCTCTTATGAAATTACGTTCGTG
 
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rJMFF018C16+          TCAGTTCCGCATCGGAGTATTTAGTTTGTCAGTTAGCTCTTGTCTTCTGTTTGTATGGCT
rJMFF004M21+          TCAGTTCCGCATCGGAGTATTTAGTTTGTCAGTTAGCTCTTGTCTTCTGTTTGTATGGCT
rJMSF003P16+          TCAGTTCCGCATCGGAGTATTTAGTTTGTCAGTTAGCTCTTGTCTTCTGTTTGTATGGCT
rJMFF008C09+          TCAGTTCCGCATCGGAGTATTTAGTTTGTCAGTTAGCTCTTGTCTTCTGTTTGTATGGCT
                      ____________________________________________________________
consensus             TCAGTTCCGCATCGGAGTATTTAGTTTGTCAGTTAGCTCTTGTCTTCTGTTTGTATGGCT
 
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rJMFF018C16+          GCTGCTGGGTAAAGTTTGGATATTTGAATGAATTAGGTTTGCTTCCTGCTGGTGAGAAAA
rJMFF004M21+          GCTGCTGGGTAAAGTTTGGATATTTGAATGAATTAGGTTTGCTTCCTGCTGGTGAGAAAA
rJMSF003P16+          GCTGCTGGGTAAAGTTTGGATATTTGAATGAATTAGGTTTGCTTCCTGCTGGTGAGAAAA
rJMFF008C09+          GCTGCTGGGTAAAGTTTGGATATTTGAATGAATTAGGTTTGCTTCCTGCTGGTGAGAAAA
                      ____________________________________________________________
consensus             GCTGCTGGGTAAAGTTTGGATATTTGAATGAATTAGGTTTGCTTCCTGCTGGTGAGAAAA
 
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rJMFF018C16+          GCCAGCCAAGGCAAGCAGAGAAGTGGCTAGTGGTCAGTCAAGCTCTGTTTAGTCAAGTGT
rJMFF004M21+          GCCAGCCAAGGCAAGCAGAGAAGTGGCTAGTGGTCAGTCAAGCTCTGTTTAGTCAAGTGT
rJMSF003P16+          GCCAGCCAAGGCAAGCAGAGAAGTGGCTAGTGGTCAGTCAAGCTCTGTTTAGTCAAGTGT
rJMFF008C09+          GCCAGCCAAGGCAAGCAGAGAAGTGGCTAGTGGTCAGTCAAGCTCTGTTTAGTCAAGTGT
                      ____________________________________________________________
consensus             GCCAGCCAAGGCAAGCAGAGAAGTGGCTAGTGGTCAGTCAAGCTCTGTTTAGTCAAGTGT
 
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rJMFF018C16+          TGTTATAAATTCTTGGCTTCATTGTTGT-CAGTGTCTTCCTTCTGTAATGTTTCC     
rJMFF004M21+          TGTTATAAATTCTTGGCTTCATTGTTGT-CAGTGTCTTCCTTCTGTAATGT         
rJMSF003P16+          TGTTATAAATTCTTGGCTTCATTGTTGTNCAGTGTCTTCCTTCTGTAATGT         
rJMFF008C09+          TGTTATAAATTCTTGGCTTCATTGTTGT-CAGTGTCTTCCTTCTGTAATGTTTCCTGTAT
                      ____________________________________________________________
consensus             TGTTATAAATTCTTGGCTTCATTGTTGT-CAGTGTCTTCCTTCTGTAATGTTTCCTGTAT