Contig 001044:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF014P23+                                  CGAGGACAACGGCAAGTACTACAATAACCCCAACAA
rJMFF007P22+                                         AACGGCAAGTACTACAATAACCCCAACAA
                      ____________________________________________________________
consensus                                     CGAGGACAACGGCAAGTACTACAATAACCCCAACAA
 
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rJMFF014P23+          TGGCTACTCCGATAGGTATTACAGCAAGGGCAACGGCTACAACATCCCCGAGAGACAGGG
rJMFF007P22+          TGGCTACTCCGATAGGTATTACAGCAAGGGCAACGGCTACAACATCCCCGAGAGACAGGG
                      ____________________________________________________________
consensus             TGGCTACTCCGATAGGTATTACAGCAAGGGCAACGGCTACAACATCCCCGAGAGACAGGG
 
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rJMFF014P23+          AATCAGCGACACCAAGTTCACGGAGACCGACAAGTACTACAATGACGTCAACGACAATAA
rJMFF007P22+          AATCAGCGACACCAAGTTCACGGAGACCGACAAGTACTACAATGACGTCAACGACAATAA
                      ____________________________________________________________
consensus             AATCAGCGACACCAAGTTCACGGAGACCGACAAGTACTACAATGACGTCAACGACAATAA
 
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rJMFF014P23+          CCTCGACAACTACAACAACAACAATGGCGGCTACTCTCAAGGAGTGAGTGACACCAAGTA
rJMFF007P22+          CCTCGACAACTACAACAACAACAATGGCGGCTACTCTCAAGGAGTGAGTGACACCAAGTA
                      ____________________________________________________________
consensus             CCTCGACAACTACAACAACAACAATGGCGGCTACTCTCAAGGAGTGAGTGACACCAAGTA
 
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rJMFF014P23+          CTACAATGACGTCAACAACAACAATGGCTACTCAGAGAAGTACAACTATAACAAGGGCAG
rJMFF007P22+          CTACAATGACGTCAACAACAACAATGGCTACTCAGAGAAGTACAACTATAACAAGGGCAG
                      ____________________________________________________________
consensus             CTACAATGACGTCAACAACAACAATGGCTACTCAGAGAAGTACAACTATAACAAGGGCAG
 
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rJMFF014P23+          CAATAATGGCGGCTACAACATGCCGGAGAGACAAGGACTGAGTGATACGAGGTTCATGGA
rJMFF007P22+          CAATAATGGCGGCTACAACATGCCGGAGAGACAAGGACTGAGTGATACGAGGTTCATGGA
                      ____________________________________________________________
consensus             CAATAATGGCGGCTACAACATGCCGGAGAGACAAGGACTGAGTGATACGAGGTTCATGGA
 
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rJMFF014P23+          TAACGGCAAGTACTACTACGATGTTAACAATAACGAGAATAACCGTGAAAATGGGTATGA
rJMFF007P22+          TAACGGCAAGTACTACTACGATGTTAACAATAACGAGAATAACCGTGAAAATGGGTATGA
                      ____________________________________________________________
consensus             TAACGGCAAGTACTACTACGATGTTAACAATAACGAGAATAACCGTGAAAATGGGTATGA
 
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rJMFF014P23+          GCCGATGAAGGAGAATGAAGGGTACAATGGCAACTTCCAGTACGAGTTCGATTCCATGGA
rJMFF007P22+          GCCGATGAAGGAGAATGAAGGGTACAATGGCAACTTCCAGTACGAGTTCGATTCCATGGA
                      ____________________________________________________________
consensus             GCCGATGAAGGAGAATGAAGGGTACAATGGCAACTTCCAGTACGAGTTCGATTCCATGGA
 
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rJMFF014P23+          GGAATATGATAAACATCATGGATATCCAAGAACCCAAACCTGGGAAGATCAACCTTGAAT
rJMFF007P22+          GGAATATGATAAACATCATGGATATCCAAGAACCCAAACCTGGGAAGATCAACCTTGAAT
                      ____________________________________________________________
consensus             GGAATATGATAAACATCATGGATATCCAAGAACCCAAACCTGGGAAGATCAACCTTGAAT
 
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rJMFF014P23+          TGCTCCGATCCAAGATTGATTTGTTTGATATGATAATGGTGGTTTGTGATGCATACTTGT
rJMFF007P22+          TGCTCCGATCCAAGATTGATTTGTTTGATATGATAATGGTGGTTTGTGATGCATACTTGT
                      ____________________________________________________________
consensus             TGCTCCGATCCAAGATTGATTTGTTTGATATGATAATGGTGGTTTGTGATGCATACTTGT
 
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rJMFF014P23+          ATTCCATCTGAGTTTGGATTTGTGTTAGCCTTATTTGCTAATTAAGCAAACCGATGGGAC
rJMFF007P22+          ATTCCATCTGAGTTTGGATTTGTGTTAGCCTTATTTGCTAATTAAGCAAACCGATGGGAC
                      ____________________________________________________________
consensus             ATTCCATCTGAGTTTGGATTTGTGTTAGCCTTATTTGCTAATTAAGCAAACCGATGGGAC
 
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rJMFF014P23+          AATTAATCATGTTATTTTAATTTGTCATGTTGGGGGTTTAGGTTTAATTTATTTACTGCT
rJMFF007P22+          AATTAATCATGTTATTTTAATTTGTCATGTTGGGGGTTTAGGTTTAATTTATTTACTGCT
                      ____________________________________________________________
consensus             AATTAATCATGTTATTTTAATTTGTCATGTTGGGGGTTTAGGTTTAATTTATTTACTGCT
 
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rJMFF014P23+          TGAGAATTAAAGTCGGTTGATGCCACTTGATAACAATGTTGAAGATTT            
rJMFF007P22+          TGAGAATTAAAGTCGGTTGATGCCACTTGATAACAATGTTGAAGATTTTGATAATATTAA
                      ____________________________________________________________
consensus             TGAGAATTAAAGTCGGTTGATGCCACTTGATAACAATGTTGAAGATTTTGATAATATTAA