Contig 001042:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF007N02+                                             TTGCCGGCGGTGTACAAAACTATAA
                      ____________________________________________________________
consensus                                                TTGCCGGCGGTGTACAAAACTATAA
 
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rJMFF023E17+                                   GGACGAGGTTCAGGCTGGATTTTCCAGGACAGGAA
rJMFF007N02+          AGAAAGCTGGAGGCCTTTGTATCGCGGACGAGGTTCAGGCTGGATTTTCCAGGACAGGAA
                      ____________________________________________________________
consensus             AGAAAGCTGGAGGCCTTTGTATCGCGGACGAGGTTCAGGCTGGATTTTCCAGGACAGGAA
 
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rJMFF023E17+          GCCACTTTTGGGGGTTCGAGAATCACGGTGTTATCCCCGA-CATAGTGACAATGGCAAAA
rJMFF007N02+          GCCACTTTTGGGGGTTCGAGAATCACGGTGTTATCCCCGACCATAGTGACAATGGCAAAA
                      ____________________________________________________________
consensus             GCCACTTTTGGGGGTTCGAGAATCACGGTGTTATCCCCGACCATAGTGACAATGGCAAAA
 
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rJMFF023E17+          GGAATTGGAAATGGGATCCCTCTGGGAGCAGTGGTGACAACTCCAGACATTGCTGAGGTT
rJMFF007N02+          GGAATTGGAAATGGGATCCCTCTGGGAGCAGTGGTGACAACTCCAGACATTGCTGAGGTT
                      ____________________________________________________________
consensus             GGAATTGGAAATGGGATCCCTCTGGGAGCAGTGGTGACAACTCCAGACATTGCTGAGGTT
 
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rJMFF023E17+          TTGACTCGTCACAATTACTTCAACACCTTCGGAGGAAATCCTGTGTGCACAGCAGCCGGG
rJMFF007N02+          TTGACTCGTCACAATTACTTCAACACCTTCGGAGGAAATCCTGTGTGCACAGCAGCCGGG
                      ____________________________________________________________
consensus             TTGACTCGTCACAATTACTTCAACACCTTCGGAGGAAATCCTGTGTGCACAGCAGCCGGG
 
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rJMFF023E17+          CACGCTGTTCTCCGAGTAGTGGAAAGGGAGGGGCTTCAAGCAAATGCCCACACCGTCGGT
rJMFF007N02+          CACGCTGTTCTCCGAGTAGTGGAAAGGGAGGGGCTTCAAGCAAATGCCCACACCGTCGGT
                      ____________________________________________________________
consensus             CACGCTGTTCTCCGAGTAGTGGAAAGGGAGGGGCTTCAAGCAAATGCCCACACCGTCGGT
 
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rJMFF023E17+          TCCTACTTGAAACGCCGCCTAATCGCCCTCAAGGATAAGCACCAGATTATTGGTGATGTG
rJMFF007N02+          TCCTACTTGAAACGCCGCCTAATCGCCCTCAAGGATAAGCACCAGATTATTGGTGATGTG
                      ____________________________________________________________
consensus             TCCTACTTGAAACGCCGCCTAATCGCCCTCAAGGATAAGCACCAGATTATTGGTGATGTG
 
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rJMFF023E17+          AGGGGAAGAGGGCTCATGCTGGGGGTGGAACTAGTCACTGACCGGGAAGAGAAGACACCG
rJMFF007N02+          AGGGGAAGAGGGCTCATGCTGGGGGTGGAACTAGTCACTGACCGGGAAGAGAAGACACCG
                      ____________________________________________________________
consensus             AGGGGAAGAGGGCTCATGCTGGGGGTGGAACTAGTCACTGACCGGGAAGAGAAGACACCG
 
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rJMFF023E17+          GCCAGGGTAGAAATTCTGCATGTGATGGAGCAGATGAAAGATTTGGGGGTGTTAATTGGC
rJMFF007N02+          GCCAGGGTAGAAATTCTGCATGTGATGGAGCAGATGAAAGATTTGGGGGTGTTAATTGGC
                      ____________________________________________________________
consensus             GCCAGGGTAGAAATTCTGCATGTGATGGAGCAGATGAAAGATTTGGGGGTGTTAATTGGC
 
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rJMFF023E17+          AAGGGTGGATTGTATGGAAATGTGTTCAGAATCACTCCTCCACTCTGCTTCTCTAAAGAT
rJMFF007N02+          AAGGGTGGATTGTATGGAAATGTGTTCAGAATCACTCCTCCACTCTGCTTCTCTAAAGAT
                      ____________________________________________________________
consensus             AAGGGTGGATTGTATGGAAATGTGTTCAGAATCACTCCTCCACTCTGCTTCTCTAAAGAT
 
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rJMFF023E17+          GATGCTGATTTTCTTGTGGATGTCATGGACTATGTTATGTCAAAGATGTGAAGAAGATTA
rJMFF007N02+          GATGCTGATTTTCTTGTGGATGTCATGGACTATTTTATGTCAAAGATGTGAAGAAGATTA
                      ____________________________________________________________
consensus             GATGCTGATTTTCTTGTGGATGTCATGGACTATTTTATGTCAAAGATGTGAAGAAGATTA
 
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rJMFF023E17+          TGATGATGCTATGATGCGAAAATTGGTCACGAAGACATCAAATCTCTTTCTTAATTAAAT
rJMFF007N02+          TGATGATGCTATGATGCGAAAATTGGTCACGAAGACATCAAATCTCTTTCTTAATTAAAT
                      ____________________________________________________________
consensus             TGATGATGCTATGATGCGAAAATTGGTCACGAAGACATCAAATCTCTTTCTTAATTAAAT
 
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rJMFF023E17+          CTATTGTACTGCCTATATAAACCAAGTTCTACTATGCCAATATAT               
rJMFF007N02+          CTATTGTACTGCCTATATAAACCAAGTTCTACTATGCCAATATATGCCACTTTAATCTTG
                      ____________________________________________________________
consensus             CTATTGTACTGCCTATATAAACCAAGTTCTACTATGCCAATATATGCCACTTTAATCTTG