clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF006N11 | Sequence | 308 | 002085 (7) | gb|EPS70427.1| | 69.3 | digalactosyldiacylglycerol synthase 1, chloroplastic, partial [Genlisea aurea] | 803 | 001038 (10) | gb|AAT67159.1| | 6e-125 | digalactosyldiacylglycerol synthase [Nicotiana tabacum] |
JMFF012K02 | Sequence | 308 | 002085 (7) | gb|EPS70427.1| | 69.3 | digalactosyldiacylglycerol synthase 1, chloroplastic, partial [Genlisea aurea] | 694 | 001038 (10) | gb|AAT67159.1| | 2e-93 | digalactosyldiacylglycerol synthase [Nicotiana tabacum] |
JMFF040N23 | Sequence | 308 | 002085 (7) | gb|EPS70427.1| | 69.3 | digalactosyldiacylglycerol synthase 1, chloroplastic, partial [Genlisea aurea] | 751 | 001038 (10) | gb|AAT67159.1| | 1e-113 | digalactosyldiacylglycerol synthase [Nicotiana tabacum] |
JMFS059E03 | Sequence | 623 | 001038 (10) | gb|AAT67159.1| | 2e-124 | digalactosyldiacylglycerol synthase [Nicotiana tabacum] | |||||
JMSF006B23 | Sequence | 295 | 012065 (3) | ref|XP_007019299.1| | 5e-30 | Hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides,ATP- | 519 | 001038 (10) | gb|AAT67159.1| | 2e-67 | digalactosyldiacylglycerol synthase [Nicotiana tabacum] |
JMSF014I21 | Sequence | 227 | 001038 (10) | gb|AHM22933.1| | 5e-43 | digalactosyldiacylglycerol synthase 1 [Nicotiana tabacum] | 776 | 001038 (10) | gb|AAT67159.1| | 2e-123 | digalactosyldiacylglycerol synthase [Nicotiana tabacum] |
JMSF019E03 | Sequence | 224 | 002085 (7) | 792 | 001038 (10) | gb|AAT67159.1| | 4e-127 | digalactosyldiacylglycerol synthase [Nicotiana tabacum] | |||
JMSF030D12 | Sequence | 659 | 001038 (10) | gb|AAT67159.1| | 4e-93 | digalactosyldiacylglycerol synthase [Nicotiana tabacum] | |||||
JMSF042B01 | Sequence | 741 | 002085 (7) | gb|AHM22933.1| | 2e-43 | digalactosyldiacylglycerol synthase 1 [Nicotiana tabacum] | 769 | 001038 (10) | gb|AAT67159.1| | 5e-121 | digalactosyldiacylglycerol synthase [Nicotiana tabacum] |
This contig is upended
. : . : . : . : . : . :
JMFS059E03- TTTCT
____________________________________________________________
consensus TTTCT
. : . : . : . : . : . :
JMFS059E03- TAGGCAAGATGGTTTGGGCAAAGGGGTACAGAGAGTTGATTGATCTCCTATCAAAGCAGA
____________________________________________________________
consensus TAGGCAAGATGGTTTGGGCAAAGGGGTACAGAGAGTTGATTGATCTCCTATCAAAGCAGA
. : . : . : . : . : . :
JMFS059E03- AAAAGGATCTCGACGGCTTCAACTTGGATGCTTTTGGAAACGGGGAAGATGCTCATGAAG
JMSF014I21- AAACGGGGAAGATGCTCATGAAG
rJMSF019E03+ TTTTGGAAACGGGGAAGATGCTCATGAAG
rJMSF014I21+ GGGAAGATGCTCATGAAG
rJMSF042B01+ CTCATGAAG
rJMFF006N11+ AAACGGGGAAGATGCTCATGAAG
____________________________________________________________
consensus AAAAGGATCTCGACGGCTTCAACTTGGATGCTTTTGGAAACGGGGAAGATGCTCATGAAG
. : . : . : . : . : . :
JMFS059E03- TTCAGAACGCAGCTAAACGGTTGAATCTAAATGTCAACTTTATGAAAGGCAGAGACCATG
JMSF014I21- TTCAGAACGCAGCTAAACGGTTGAATCTAAATGTCAACTTTATGAAAGGCAGAGACCATG
rJMSF019E03+ TTCAGAACGCAGCTAAACGGTTGAATTTAAATGTCAACTTTATGAAAGGCAGAGACCATG
rJMSF014I21+ TTCAGAACGCAGCTAAACGGTTGAATCTAAATGTCAACTTTATGAAAGGCAGAGACCATG
rJMSF042B01+ TTCAGAACGCAGCTAAACGGTTGAATCTAAATGTCAACTTTATGAAAGGCAGAGACCATG
rJMFF040N23+ TCTAAATGTCAACTTTATGAAAGGCAGAGACCATG
rJMFF006N11+ TTCAGAACGCAGCTAAACGGTTGAATCTAAATGTCAACTTTATGAAAGGCAGAGACCATG
____________________________________________________________
consensus TTCAGAACGCAGCTAAACGGTTGAATCTAAATGTCAACTTTATGAAAGGCAGAGACCATG
. : . : . : . : . : . :
JMFS059E03- CTGATGATTCTCTTCACGGTTACAAGGTCTTTATAAATCCCAGTGTAAGCGATGTGCTGT
JMSF014I21- CTGATGATTCTCTTCACGGTTACAAGGTCTTTATAAATCCCAGTGTAAGCGATGTGCTGT
rJMSF019E03+ CTGATGATTCTCTTCACGGTTACAAGGTCTTTATAAATCCCAGTGTAAGCGATGTGCTGT
rJMSF014I21+ CTGATGATTCTCTTCACGGTTACAAGGTCTTTATAAATCCCAGTGTAAGCGATGTGCTGT
rJMSF042B01+ CTGATGATTCTCTTCACGGTTACAAGGTCTTTATAAATCCCAGTGTAAGCGATGTGCTGT
rJMFF040N23+ CTGATGATTCTCTTCACGGTTACAAGGTCTTTATAAATCCCAGTGTAAGCGATGTGCTGT
rJMFF012K02+ CCCAGTGTAAGCGATGTGCTGT
rJMSF030D12+ TCCCAGTGTAAGCGATGTGCTGT
rJMFF006N11+ CTGATGATTCTCTTCACGGTTACAAGGTCTTTATAAATCCCAGTGTAAGCGATGTGCTGT
____________________________________________________________
consensus CTGATGATTCTCTTCACGGTTACAAGGTCTTTATAAATCCCAGTGTAAGCGATGTGCTGT
. : . : . : . : . : . :
JMFS059E03- GCACCGCAACAGCTGAGGCTCTTGCCATGGGTAAATTTGTTGTTTGTGCCGACCACCCAT
JMSF014I21- GCACCGCAACAGCTGAGGCTCTTGCCATGGGTAAATTTGTTGTTTGTGCCGACCACCCAT
rJMSF019E03+ GCACCGCAACAGCTGAGGCTCTTGCCATGGGTAAATTTGTTGTTTGTGCCGACCACCCAT
rJMSF014I21+ GCACCGCAACAGCTGAGGCTCTTGCCATGGGTAAATTTGTTGTTTGTGCCGACCACCCAT
rJMSF042B01+ GCACCGCAACAGCTGAGGCTCTTGCCATGGGTAAATTTGTTGTTTGTGCCGACCACCCAT
rJMFF040N23+ GCACCGCAACAGCTGAGGCTCTTGCCATGGGTAAATTTGTTGTTTGTGCCGACCACCCAT
rJMFF012K02+ GCACCGCAACAGCTGAGGCTCTTGCCATGGGTAAATTTGTTGTTTGTGCCGACCACCCAT
rJMSF030D12+ GCACCGCAACAGCTGAGGCTCTTGCCATGNGTAAATTTGTTGTTTGTGCCGACCACCCAT
rJMFF006N11+ GCACCGCAACAGCTGAGGCTCTTGCCATGGGTAAATTTGTTGTTTGTGCCGACCACCCAT
____________________________________________________________
consensus GCACCGCAACAGCTGAGGCTCTTGCCATGGGTAAATTTGTTGTTTGTGCCGACCACCCAT
. : . : . : . : . : . :
JMFS059E03- CAAATGAGTTTTTCAGGGCATTCCCCAACTGCTTGACATACAAGTCACCAGAAGAGTTTG
JMSF014I21- CAAATGAGTTTTTCAGGG
rJMSF019E03+ CAAATGAGTTTTTCAGGGCATTCCCCAACTGCTTGACATACAAGTCACCAGAAGAGTTTG
rJMSF014I21+ CAAATGAGTTTTTCAGGGCATTCCCCAACTGCTTGACATACAAGTCACCAGAAGAGTTTG
rJMSF042B01+ CAAATGAGTTTTTCAGGGCATTCCCCAACTGCTTGACATACAAGTCACCAGAAGAGTTTG
rJMFF040N23+ CAAATGAGTTTTTCAGGGCATTCCCCAACTGCTTGACATACAAGTCACCAGAAGAGTTTG
rJMFF012K02+ CAAATGAGTTTTTCAGGGCATTCCCCAACTGCTTGACATACAAGTCACCAGAAGAGTTTG
rJMSF030D12+ CAAATGAGTTTTTCAGGGCATTCCCCAACTGCTTGACATACAAGTCACCAGAAGAGTTTG
rJMSF006B23+ CATTCCCCAACTGCTTGACATACAAGTCACCAGAAGAGTTTG
rJMFF006N11+ CAAATGAGTTTTTCAGGGCATTCCCCAACTGCTTGACATACAAGTCACCAGAAGAGTTTG
____________________________________________________________
consensus CAAATGAGTTTTTCAGGGCATTCCCCAACTGCTTGACATACAAGTCACCAGAAGAGTTTG
. : . : . : . : . : . :
JMFS059E03- TAGCCAAAATTAAAGAAGCAATGTCCAGCGAGCCTCAGCCTCTTACCCCCGAGCAGAGAT
rJMSF019E03+ TAGCCAAAATTAAAGAAGCAATGTCCAGCGAGCCTCAGCCTCTTACCCCCGAGCAGAGAT
rJMSF014I21+ TAGCCAAAATTAAAGAAGCAATGTCCAGCGAGCCTCAGCCTCTTACCCCCGAGCAGAGAT
rJMSF042B01+ TAGCCAAAATTAAAGAAGCAATGTCCAGCGAGCCTCAGCCTCTTACCCCCGAGCAGAGAT
rJMFF040N23+ TAGCCAAAATTAAAGAAGCAATGTCCAGCGAGCCTCAGCCTCTTACCCCCGAGCAGAGAT
rJMFF012K02+ TAGCCAAAATTAAAGAAGCAATGTCCAGCGAGCCTCAGCCTCTTACCCCCGAGCAGAGAT
rJMSF030D12+ TAGCCAAAATTAAAGAAGCAATGTCCAGCGAGCCTCAGCCTCTTACCCCCGAGCAGAGAT
rJMSF006B23+ TAGCCAAAATTAAAGAAGCAATGTCCAGCGAGCNTCAGCCTCTTACCCCCGAGCAGAGAT
rJMFF006N11+ TAGCCAAAATTAAAGAAGCAATGTCCAGCGAGCCTCAGCCTCTTACCCCCGAGCAGAGAT
____________________________________________________________
consensus TAGCCAAAATTAAAGAAGCAATGTCCAGCGAGCCTCAGCCTCTTACCCCCGAGCAGAGAT
. : . : . : . : . : . :
JMFS059E03- ATAAGCTCTCATGGGAGGCTGCCACGCAAAGATTCCTAGAATTTTCTGACCTCGACAAGA
rJMSF019E03+ ATAAGCTCTCATGGGAGGCTGCCACGCAAAGATTCCTAGAATTTTCTGACCTCGACAAGA
rJMSF014I21+ ATAAGCTCTCATGGGAGGCTGCCACGCAAAGATTCCTAGAATTTTCTGACCTCGACAAGA
rJMSF042B01+ ATAAGCTCTCATGGGAGGCTGCCACGCAAAGATTCCTAGAATTTTCTGACCTCGACAAGA
rJMFF040N23+ ATAAGCTCTCATGGGAGGCTGCCACGCAAAGATTCCTAGAATTTTCTGACCTCGACAAGA
rJMFF012K02+ ATAAGCTCTCATGGGAGGCTGCCACGCAAAGATTCCTAGAATTTTCTGACCTCGACAAGA
rJMSF030D12+ ATAAGCTNTCATGGGAGGCTGCCACGCAAAGATTCCTAGAATTTTCTGACCTCGACAAGA
rJMSF006B23+ ATAAGCTCTCATGGGAGGCTGCCACGCAAAGATTCCTAGAATTTTCTGACCTCGACAAGA
rJMFF006N11+ ATAAGCTCTCATGGGAGGCTGCCACGCAAAGATTCCTAGAATTTTCTGACCTCGACAAGA
____________________________________________________________
consensus ATAAGCTCTCATGGGAGGCTGCCACGCAAAGATTCCTAGAATTTTCTGACCTCGACAAGA
. : . : . : . : . : . :
JMFS059E03- TCTTGAACAACGAAACGCTTCTAGACAGAAGAAACCAGAAGGGCATTGTGAAATCAACTT
rJMSF019E03+ TCTTGAACAACGAAACGCTTCTAGACAGAAGAAACCAGAAGGGCATTGTGAAATCAACTT
rJMSF014I21+ TCTTGAACAACGAAACGCTTCTAGACAGAAGAAACCAGAAGGGCATTGTGAAATCAACTT
rJMSF042B01+ TCTTGAACAACGAAACGCTTCTAGACAGAAGAAACCAGAAGGGCATTGTGAAATCAACTT
rJMFF040N23+ TCTTGAACAACGAAACGCTTCTAGACAGAAGAAACCAGAAGGGCATTGTGAAATCAACTT
rJMFF012K02+ TCTTGAACAACGAAACGCTTCTAGACAGAAGAAACCAGAAGGGCATTGTGAAATCAACTT
rJMSF030D12+ TCTTGAACAACGAAACGCTTCTAGACAGAAGAAACCAGAAGGGCATTGTGAAATCAACTT
rJMSF006B23+ TCTTGAACAACGAAACGCTTCTAGACAGAAGAAACCAGAAGGGCATTGTGAAATCAACTT
rJMFF006N11+ TCTTGAACAACGAAACGCTTCTAGACAGAAGAAACCAGAAGGGCATTGTGAAATCAACTT
____________________________________________________________
consensus TCTTGAACAACGAAACGCTTCTAGACAGAAGAAACCAGAAGGGCATTGTGAAATCAACTT
. : . : . : . : . : . :
JMFS059E03- CCATGCCCAACCTGNGAGAAATGGTCGATGGTAGCTTGGCATTCGCCCATTATTGTCTCA
rJMSF019E03+ CCATGCCCAACCTGGGAGAAATGGTCGATGGTAGCTTGGCATTCGCCCATTATTGTCTCA
rJMSF014I21+ CCATGCCCAACCTGGGAGAAATGGTCGATGGTAGCTTGGCATTCGCCCATTATTGTCTCA
rJMSF042B01+ CCATGCCCAACCTGGGAGAAATGGTCGATGGTAGCTTGGCATTCGCCCATTATTGTCTCA
rJMFF040N23+ CCATGCCCAACCTGGGAGAAATGGTCGATGGTAGCTTGGCATTCGCCCATTATTGTCTCA
rJMFF012K02+ CCATGCCCAACCTGGGAGAAATGGTCGATGGTAGCTTGACATTCGCCCATTATTGTCTCA
rJMSF030D12+ CCATGCCCAACCTGGGAGAAATGGTCGATGGTAGCTTGGCATTCGCCCATTATTGTCTCA
rJMSF006B23+ CCATGCCCAACCTGGGAGAAATGGTCGATGGTAGCTTGGCATTCGCCCATTATTGTCTCA
rJMFF006N11+ CCATGCCCAACCTGGGAGAAATGGTCGATGGTAGCTTGGCATTCGCCCATTATTGTCTCA
____________________________________________________________
consensus CCATGCCCAACCTGGGAGAAATGGTCGATGGTAGCTTGGCATTCGCCCATTATTGTCTCA
. : . : . : . : . : . :
JMFS059E03- CGGNGAATGAGTTTCTGA
rJMSF019E03+ CGGGGAATGAGTTTCTGAGGTTGTGCACTGGTGCTATTCCAGGTACGCGGGACTATAGCA
rJMSF014I21+ CGGGGAATGAGTTTCTGAGGTTGTGCACTGGTGCTATTCCAGGTACGCGGGACTATAGCA
rJMSF042B01+ CGGGGAATGAGTTTCTGAGGTTGTGCACTGGTGCTATTCCAGGTACGCGGGACTATAGCA
rJMFF040N23+ CGGGGAATGAGTTTCTGAGGTTGTGCACTGGTGCTATTCCAGGTACGCGGGACTATAGCA
rJMFF012K02+ CGGGGAATGAGTTTCTGAGGTTGTGCACTGGTGCTATTCCAGGTACGCGGGACTATAGCA
rJMSF030D12+ CGGGGAATGAGTTTCTGAGGTTGTGCACTGGTGCTATTCCAGGTACGCGGGACTATAGCA
rJMSF006B23+ CGGGGAATGAGTTTCTGAGGTTGTGCACTGGTGCTATTCCAGGTACGCGGGACTATAGCA
rJMFF006N11+ CGGGGAATGAGTTTCTGAGGTTGTGCACTGGTGCTATTCCAGGTACGCGGGACTATAGCA
____________________________________________________________
consensus CGGGGAATGAGTTTCTGAGGTTGTGCACTGGTGCTATTCCAGGTACGCGGGACTATAGCA
. : . : . : . : . : . :
rJMSF019E03+ AAGAACATTCTAACGATCTCCATCTTTTGCCCCCTGAAGTGGAAAACCCAGTGTATACCT
rJMSF014I21+ AAGAACATTCTAACGATCTCCATCTTTTGCCCCCTGAAGTGGAAAACCCAGTGTATACCT
rJMSF042B01+ AAGAACATTCTAACGATCTCCATCTTTTGCCCCCTGAAGTGGAAAACCCAGTGTATACCT
rJMFF040N23+ AAGAACATTCTAACGATCTCCATCTTTTGCCCCCTGAAGTGGAAAACCCAGTGTATACCT
rJMFF012K02+ AAGAACATTCTAACGATCTCCATCTTTTGCCCCCTGAAGTGGAAAACCCAGTGTATACCT
rJMSF030D12+ AAGAACATTCTAACGATCTCCATCTTTTGCCCCCTGAAGTGGAAAACCCAGTGTATACCT
rJMSF006B23+ AAGAACATTCTAACGATCTCCATCTTTTGCCCCCTGAAGTGGAAAACCCAGTGTATACCT
rJMFF006N11+ AAGAACATTCTAACGATCTCCATCTTTTGCCCCCTGAAGTGGAAAACCCAGTGTATACCT
____________________________________________________________
consensus AAGAACATTCTAACGATCTCCATCTTTTGCCCCCTGAAGTGGAAAACCCAGTGTATACCT
. : . : . : . : . : . :
rJMSF019E03+ GGTAGGTAGGTACATATATAAATGAGCTGTAGATTAATTTTTCGTGTTGTGTATCATAGA
rJMSF014I21+ GGTAGGTAGGTACATATATAAATGAGCTGTAGATTAATTTTTCGTGTTGTGTATCATAGA
rJMSF042B01+ GGTAGGTAGGTACATATATAAATGAGCTGTAGATTAATTTTTCGTGTTGTGTATCATAGA
rJMFF040N23+ GGTAGGTAGGTACATATATAAATGAGCTGTAGATTAATTTTTCGTGTTGTGTATCATAGA
rJMFF012K02+ GGTAGGTAGGTACATATATAAATGAGCTGTAGATTAATTTTTCGTGTTGTGTATCATAGA
rJMSF030D12+ GGTAGGTAGGTACATATATAAATGAGCTGTAGATTAATTTTTCGNGTTGTGTATCATAGA
rJMSF006B23+ GGTAGGTAGGTACATATATAAATGAGCTGTAGATTAATTTTTCGTGTTGTGTATCATAGA
rJMFF006N11+ GGTAGGTAGGTACATATATAAATGAGCTGTAGATTAATTTTTCGTGTTGTGTATCATAGA
____________________________________________________________
consensus GGTAGGTAGGTACATATATAAATGAGCTGTAGATTAATTTTTCGTGTTGTGTATCATAGA
. : . : . : . : . : . :
rJMSF019E03+ TATACACCATGCCACTTGAATAATATGCTTTGTAGTTTAGGTTGTTGATACCCGTGTCCT
rJMSF014I21+ TATACACCATGCCACTTGAATAATATGCTTTGTAGTTTAGGTTGTTGATACCCGTGTCCT
rJMSF042B01+ TATACACCATGCCACTTGAATAATATGCTTTGTAGTTTAGGTTGTTGATACCCGTGTCCT
rJMFF040N23+ TATACACCATGCCACTTGAATAATATGCTTTGTAGTTTAGGTTGTTGATACCCGTGTCCT
rJMFF012K02+ TATACACCATGCCACTTGAATAATATGCTTTGTAGTTTAGGTTGTTGATACCCGTGTCCT
rJMSF030D12+ TATACACCATGCCACTTGAATAATATGCTTTGTAGTTTAGGTNGTTGATACCCGTGTCCT
rJMSF006B23+ TATACACCATGCCACTTGAATAATATGCTTTGTAGTTTAGGTTGTTGATACCCGTGT
rJMFF006N11+ TATACACCATGCCACTTGAATAATATGCTTTGTAGTTTAGGTTGTTGATACCCGTGTCCT
____________________________________________________________
consensus TATACACCATGCCACTTGAATAATATGCTTTGTAGTTTAGGTTGTTGATACCCGTGTCCT
. : . : . : . : . : . :
rJMSF019E03+ GTAATTGTGTACTGGTTGTACAATTTAGGCAAAGAAA
rJMSF014I21+ GTAATTGTGTACTGGTTGTACAATTTAGGCAAAGAAAA
rJMSF042B01+ GTAATTGTGTACTGGTTGTACAATTTAGGCAAAGAAAACT
rJMFF040N23+ GTAATTGTGTACTGGTTGTACAATTTAGGCAAAGAAAACTATATATCAAAATCAAA
rJMFF012K02+ GTAATTGTGTACTGGTTGTACAATTTAGGCAAAGAAAACTATATATCAAAATCAAA
rJMSF030D12+ GTAATTGTGTACTGGTTGTACAATTTAGNCAAAGAA
rJMFF006N11+ GTAATTGTGTACTGGTTGTACAATTTAGGCAAAGAAAACTATATATCAAAATCAAAGAAA
____________________________________________________________
consensus GTAATTGTGTACTGGTTGTACAATTTAGGCAAAGAAAACTATATATCAAAATCAAAGAAA