| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001E10 | Sequence | 299 | 001036 (8) | ||||||||
| JMFF006A05 | Sequence | 544 | 002172 (9) | ref|XP_011078818.1| | 2e-17 | PREDICTED: protein trichome birefringence-like [Sesamum indicum] | 193 | 001036 (8) | |||
| JMFF006A15 | Sequence | 543 | 002172 (9) | ref|XP_011078818.1| | 8e-16 | PREDICTED: protein trichome birefringence-like [Sesamum indicum] | 802 | 001036 (8) | ref|XP_006362212.1| | 419 | PREDICTED: uncharacterized protein LOC102599885 [Solanum tuberosum] |
| JMFF046J10 | Sequence | 504 | 002172 (9) | ref|XP_011078818.1| | 7e-16 | PREDICTED: protein trichome birefringence-like [Sesamum indicum] | 332 | 001036 (8) | |||
| JMSF006J13 | Sequence | 448 | 002172 (9) | ref|XP_011078818.1| | 1e-17 | PREDICTED: protein trichome birefringence-like [Sesamum indicum] | 345 | 001036 (8) | |||
| JMSF011E19 | Sequence | 455 | 002172 (9) | ref|XP_011078818.1| | 2e-17 | PREDICTED: protein trichome birefringence-like [Sesamum indicum] | 353 | 001036 (8) | |||
| JMSF015M23 | Sequence | 241 | 002172 (9) | 354 | 001036 (8) | ||||||
| JMSF031J20 | Sequence | 606 | 002172 (9) | ref|XP_011078818.1| | 2e-16 | PREDICTED: protein trichome birefringence-like [Sesamum indicum] | 286 | 001036 (8) | |||
This contig is upended
. : . : . : . : . : . :
rJMFF006A15+ GAAGAATATAACTGTACAGTGGAGTTCTTTGTGGCTCCGTTCTTGGTTC
____________________________________________________________
consensus GAAGAATATAACTGTACAGTGGAGTTCTTTGTGGCTCCGTTCTTGGTTC
. : . : . : . : . : . :
rJMFF006A15+ AAGAATGGGAGATAGCAGATAAGAAGGGACAGAAGAAGAAGGAAACGCTTCGACTTGATT
____________________________________________________________
consensus AAGAATGGGAGATAGCAGATAAGAAGGGACAGAAGAAGAAGGAAACGCTTCGACTTGATT
. : . : . : . : . : . :
rJMFF006A15+ TGGTGGCACATTCTGCAGATAAATATAAGAATGCAGACATTTTGGTTTTCAACACAGGCC
____________________________________________________________
consensus TGGTGGCACATTCTGCAGATAAATATAAGAATGCAGACATTTTGGTTTTCAACACAGGCC
. : . : . : . : . : . :
rJMFF006A15+ ACTGGTGGACTCACGAGAAGACTTCCAAAGGGGAGGATTATTATCAAGAAGGCAGTCACG
____________________________________________________________
consensus ACTGGTGGACTCACGAGAAGACTTCCAAAGGGGAGGATTATTATCAAGAAGGCAGTCACG
. : . : . : . : . : . :
rJMFF006A15+ TGTACCATGAACTGAACGTTGTTGAGGCTTTTCGCAAAGCTTTGACTACATGGGGGAGAT
____________________________________________________________
consensus TGTACCATGAACTGAACGTTGTTGAGGCTTTTCGCAAAGCTTTGACTACATGGGGGAGAT
. : . : . : . : . : . :
rJMFF006A15+ GGGTTGATACCCATATAAATCCCGCAAAAACATTTGTTCTCTTTAGAGGCTATTCCGCTT
____________________________________________________________
consensus GGGTTGATACCCATATAAATCCCGCAAAAACATTTGTTCTCTTTAGAGGCTATTCCGCTT
. : . : . : . : . : . :
rJMFF006A15+ CTCATTTCAGCGGTGGTCAGTGGAACTCTGGCGGGGCGTGTGACCACGAGGTCGAGCCAA
____________________________________________________________
consensus CTCATTTCAGCGGTGGTCAGTGGAACTCTGGCGGGGCGTGTGACCACGAGGTCGAGCCAA
. : . : . : . : . : . :
rJMFF006A15+ TTAAGAACGAGACTTACTTAACCCCGTACCCACCCAAGATGGAAGTCTTGGAAAGAGTAC
____________________________________________________________
consensus TTAAGAACGAGACTTACTTAACCCCGTACCCACCCAAGATGGAAGTCTTGGAAAGAGTAC
. : . : . : . : . : . :
rJMFF006A15+ TCAACGGGATGAAGACTCAAGTGTCTTACCTTAATGTCACGAGAATGACTGATTTCCGAA
____________________________________________________________
consensus TCAACGGGATGAAGACTCAAGTGTCTTACCTTAATGTCACGAGAATGACTGATTTCCGAA
. : . : . : . : . : . :
rJMFF006A15+ AGGACGCCCACCCATCAATGTACCGGAAACAATATTTGTCCGAGGAGGAGCGGAGATCGC
____________________________________________________________
consensus AGGACGCCCACCCATCAATGTACCGGAAACAATATTTGTCCGAGGAGGAGCGGAGATCGC
. : . : . : . : . : . :
rJMFF006A15+ CATTGCGGTACCAAGATTGCAGCCATTGGTGCCTGCCGGGCGTGCCAGACTACTGGAATG
rJMFF046J10+ CGGGCGTGCCAGACTACTGGAATG
____________________________________________________________
consensus CATTGCGGTACCAAGATTGCAGCCATTGGTGCCTGCCGGGCGTGCCAGACTACTGGAATG
. : . : . : . : . : . :
rJMFF006A15+ AGCTCTTGTATGCAGAACTTCTTGTAAAGCAATACCAGAAAAGCAGCAAGAAAGCAGGTC
rJMFF046J10+ AGCTCTTGTATGCAGAACTTCTTGTAAAGCAATACCAGAAAAGCAGCAAGAAAGCAGGTC
____________________________________________________________
consensus AGCTCTTGTATGCAGAACTTCTTGTAAAGCAATACCAGAAAAGCAGCAAGAAAGCAGGTC
. : . : . : . : . : . :
rJMFF006A15+ ATAGGTAAAATGACACAAATCCAGGCTTTTATATATACACACCTAAAGTTTATAGAAAAA
rJMFF046J10+ ATAGGTAAAATGACACAAATCCAGGCTTTTATATATACACACCTAAAGTTTATAGAAAAA
____________________________________________________________
consensus ATAGGTAAAATGACACAAATCCAGGCTTTTATATATACACACCTAAAGTTTATAGAAAAA
. : . : . : . : . : . :
rJMFF006A15+ TGTGTATTAAATTACATTTTTTCATATCATA
rJMFF046J10+ TGTGTATTAAATTACATTTTTTCATATCATAAGTTATTTGTAAGAGTAAAAAAAAAAAAG
rJMSF015M23+ AAAAAAAAAAAG
rJMSF011E19+ AAAAAAAAAAAG
rJMSF006J13+ AAAAAAAAAAAG
rJMSF031J20+ TTTGTAAGGGNAAAAAAAAAAAAG
rJMFF001E10+ AAAAAAAAAAAG
rJMFF006A05+ AAAAAAAAAAAG
____________________________________________________________
consensus TGTGTATTAAATTACATTTTTTCATATCATAAGTTATTTGTAAGGGTAAAAAAAAAAAAG
. : . : . : . : . : . :
rJMFF046J10+ AAAATCCTGGGATTGTCCGGTTTAAGGTTTAGATCTTAAATCCGGGATTGAACGGGGACA
rJMSF015M23+ AAAATCCTGGGATTGTCCGGTTTAAGGTTTAGATCTTAAATCCGGGATTGAACGGGGACA
rJMSF011E19+ AAAATCCTGGGATTGTCCGGTTTAAGGTTTAGATCTTAAATCCGGGATTGAACGGGGACA
rJMSF006J13+ AAAATCCTGGGATTGTCCGGTTTAAGGTTTAGATCTTAAATCCGGGATTGAACGGGGACA
rJMSF031J20+ AAAATCCTGGGATTGTCCGGTTTAAGGTTTAGATCTTAAATCCGGGATTGAACGGGGACA
rJMFF001E10+ AAAATCCTGGGATTGTCCGGTTTAAGGTTTAGATCTTAAATCCGGGATTGAACGGGGACA
rJMFF006A05+ AAAATCCTGGGATTGTCCGGTTTAAGGTTTAGATCTTAAATCCGGGATTGAACGGGGACA
____________________________________________________________
consensus AAAATCCTGGGATTGTCCGGTTTAAGGTTTAGATCTTAAATCCGGGATTGAACGGGGACA
. : . : . : . : . : . :
rJMFF046J10+ TGATCGAGTATCGATATGATACATATATATGTCAGATCGTATATTTGTGATGTGAATGTG
rJMSF015M23+ TGATCGATTATCGATATGATACATATATATGTCACATCATATATTTGTGATGTGAATGTT
rJMSF011E19+ TGATCGATTATCGATATGATACATATATATGTCACATCATATATTTGTGATGTGAATGTT
rJMSF006J13+ TGATCGATTATCGATATGATACATATATATGTCACATCATATATTTGTGATGTGAATGTT
rJMSF031J20+ TGATCGATTATCGATATGATACATATATATGTCACATCATATATTTGTGATGTGAATGTT
rJMFF001E10+ TGATCGATTATCGATATGATACATATATATGTCACATCATATATTTGTGATGTGAATGTT
rJMFF006A05+ TGATCGATTATCGATATGATACATATATATGTCACATCATATATTTGTGATGTGAATGTT
____________________________________________________________
consensus TGATCGATTATCGATATGATACATATATATGTCACATCATATATTTGTGATGTGAATGTT
. : . : . : . : . : . :
rJMFF046J10+ GTAAATCC
rJMSF015M23+ GTAAATCCATCCTTAGTGTAATA-CTTGTGAAGAGCAAAAACAAT
rJMSF011E19+ GTAAATCCATCCTTAGTGTAATA-CTTGTGAAGAGCAAAAACAA
rJMSF006J13+ GTAAATCCATCCTTAGTGTAATACCTTGTGAAGAGCAAAAACAAT
rJMSF031J20+ GTAAATCCATCCTTAGTGTAATA-CTTGTGAAGAGCAAAAACAAT
rJMFF001E10+ GTAAATCCATCCTTAGTGTAATA-CTTGTGAAGAGCAAAAACAATTTGTTACATACA
rJMFF006A05+ GTAANTCCATCCTTAGTGTAATN-CNTGTGAAGAGCAAAAACAATTTGTTACATACAACT
____________________________________________________________
consensus GTAAATCCATCCTTAGTGTAATA-CTTGTGAAGAGCAAAAACAATTTGTTACATACAACT