| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004P08 | Sequence | 632 | 001031 (8) | gb|KDO65710.1| | 2e-24 | hypothetical protein CISIN_1g001252mg [Citrus sinensis] | |||||
| JMFF029L14 | Sequence | 697 | 001031 (8) | gb|KDO65710.1| | 2e-43 | hypothetical protein CISIN_1g001252mg [Citrus sinensis] | |||||
| JMFF032C04 | Sequence | 494 | 001031 (8) | gb|KDO65710.1| | 7e-19 | hypothetical protein CISIN_1g001252mg [Citrus sinensis] | |||||
| JMSF007F19 | Sequence | 477 | 000388 (5) | emb|CDP18061.1| | 2e-58 | unnamed protein product [Coffea canephora] | 717 | 001031 (8) | ref|XP_004236058.1| | 1e-62 | PREDICTED: protein LONGIFOLIA 2 [Solanum lycopersicum] ref|XP_010318861.1| PREDI |
| JMSF025H23 | Sequence | 472 | 010570 (6) | 315 | 001031 (8) | ||||||
| JMSF035G18 | Sequence | 681 | 000388 (5) | ref|XP_004236058.1| | 2e-70 | PREDICTED: protein LONGIFOLIA 2 [Solanum lycopersicum] ref|XP_010318861.1| PREDI | 633 | 001031 (8) | gb|KDO65710.1| | 1e-38 | hypothetical protein CISIN_1g001252mg [Citrus sinensis] |
| JMSF035J18 | Sequence | 682 | 000388 (5) | ref|XP_004236058.1| | 6e-71 | PREDICTED: protein LONGIFOLIA 2 [Solanum lycopersicum] ref|XP_010318861.1| PREDI | 580 | 001031 (8) | ref|XP_006345115.1| | 1e-35 | PREDICTED: protein LONGIFOLIA 1-like [Solanum tuberosum] |
| JMSF051J05 | Sequence | 353 | 010570 (6) | 307 | 001031 (8) | ||||||
This contig is upended
. : . : . : . : . : . :
rJMSF007F19+ CATCGGGTCAAGCATAACGGTGTTNCAGTTCCAT
____________________________________________________________
consensus CATCGGGTCAAGCATAACGGTGTTNCAGTTCCAT
. : . : . : . : . : . :
rJMSF007F19+ CCATCCGGCCTCCCAATCAATCCCGAGTTGTTTTTGGTTNTGGAGCAAACCAGGGCAAGT
rJMSF035G18+ GGGCAAGT
____________________________________________________________
consensus CCATCCGGCCTCCCAATCAATCCCGAGTTGTTTTTGGTTNTGGAGCAAACCAGGGCAAGT
. : . : . : . : . : . :
rJMSF035J18+ CCAAAGAGAAGGT-CCCCCGTAA
rJMSF007F19+ ACTTCAGTGAAGGAAGAAAATATCGCCCAATTCAAGTCCAAAGAGAAGGT-CCNCCGTAA
rJMSF035G18+ NNTTCAGNGAAGGAAGAAAATNTCNCCCAATTCAAGTCCAAAGAGAAGGTCCCCCCGTAA
rJMFF029L14+ CCGTAA
____________________________________________________________
consensus ACTTCAGTGAAGGAAGAAAATATCGCCCAATTCAAGTCCAAAGAGAAGGT-CCCCCGTAA
. : . : . : . : . : . :
rJMSF035J18+ GCTTGTTTTTGATCTCGTAAATGAAATCCTTGCTACGAAACTGGCTTTTCTTGGAACCTT
rJMSF007F19+ GCTTGTTTTTGATNTCGTAAATGAAATCCNTGCTACGAAACTGGCTTTTCTTGGAACCTT
rJMSF035G18+ GCTTGTTTTTGATNTCGTAAATGAAATCCNTGCTACGAAACTGGCTTTTCTTGGAACCTT
rJMFF029L14+ GCTTGTTTTTGATCTCGTAAATGAAATCC-TTNTACGAAACTGGCTTTTCTTGGAACCTT
____________________________________________________________
consensus GCTTGTTTTTGATCTCGTAAATGAAATCCTTGCTACGAAACTGGCTTTTCTTGGAACCTT
. : . : . : . : . : . :
rJMSF035J18+ TTCCGAGCCGTGGGTGAAGCCCCAGAAGTTAGCGAAGAACACCCTGAACGCNCAAAAGCT
rJMSF007F19+ TTCCGAGCCGTGGGNGAAGCCCCNGAAGTTAGCGAAGAACCCCCTGAACGCNCAAAAGCT
rJMSF035G18+ TTCCGAGCCGTGGGTGAAGCCCCAGAAGTTAGCGAAGAACCCCCTGAACGCNCAAAAGCT
rJMFF029L14+ TTCCGAGCCGTGGGTGAAGCCCCAGAAGTTAGCGAAGAACACCCTGAACGCACAAAAGCT
____________________________________________________________
consensus TTCCGAGCCGTGGGTGAAGCCCCAGAAGTTAGCGAAGAACCCCCTGAACGCACAAAAGCT
. : . : . : . : . : . :
rJMSF035J18+ ACTTAGAGAGCTGTGCTCGGAAATCGAACAGCTTCAAGCTAAATCATCCAAATGCGAGGT
rJMSF007F19+ ACTTAGAGAGCTGTGCTCGGAAATCGAACAGCTTCAAGCTAAATCATCCAAATGCGAGGT
rJMSF035G18+ ACTTAGAGAGCTGTGCTCGGAAATCGAACAGCTTCAAGCTAAATCATCCAAATNCGAGGT
rJMFF032C04+ CTCGGAAATNGANCAGCTTCAAGCTAAATCATCCAAATGCGAGGT
rJMFF029L14+ NCTTAGAGAGCTGTGCTCGGAAATCGAACAGCTTCAAGNTAAATCATCCAAATGCGAGGT
rJMFF004P08+ GAACAGCTTCAAGCTAAATCATCCAAATGCGAGGT
____________________________________________________________
consensus ACTTAGAGAGCTGTGCTCGGAAATCGAACAGCTTCAAGCTAAATCATCCAAATGCGAGGT
. : . : . : . : . : . :
rJMSF035J18+ GGA-GGACGAGGATGATGAGCTGAAAAACNTNTTGNGGGAGGATGTGTTGCCCCGGTCAG
rJMSF007F19+ GGA-GGACGAGGATGATGAGCTGAAAAACATATTGTGGGAGGATGTGTTGCNCCGGTCNG
rJMSF035G18+ GGA-GGACGAGGATGATGAGCTGAAAAACATATTGTGGGAGGATGTGTTGCNCCGGTCAG
rJMFF032C04+ GGAGGGNCGAGGATGATGAGCTGAAAAACATATTGTGGGAGGATGTGTTGCACCGGTCAG
rJMFF029L14+ GGA-GGACGAGGATGATGAGCTGAAAAACATATTGTGGGAGGATGTGTTGCNCCGGTCAG
rJMFF004P08+ GGA-GGACGAGGATGATGAGCTGAAAAACATNTTGTGGGAGGATGTGTTGCCCCGGTCAG
____________________________________________________________
consensus GGA-GGACGAGGATGATGAGCTGAAAAACATATTGTGGGAGGATGTGTTGCCCCGGTCAG
. : . : . : . : . : . :
rJMSF035J18+ GGAGTTGGACAGATTTCAACCNTGAAATCTNGGCTATTGTGCTTGANGTCGAGCGTTTGG
rJMSF007F19+ GGAGTTGGACAGATTTCAACCNTGAAATNTNGGCTATTGTGCTTGATGTCGAGCGTTTGG
rJMSF035G18+ GGAGTTGGACAGATTTCAACCNTGAAATNTCGGCTATTGTGCTTGATGTCGAGCGTTTGG
rJMFF032C04+ GGAGTTGGACAGATTTCAACCATGAAATTTCGGCTATTGTGCTTGATGTCGAGCGTTTGG
rJMSF051J05+ GCTTGATGTCGAGCGTTTGG
rJMFF029L14+ GGAGTTGGACAGATTTCAACCATGAAATNTCGGCTATTGTGCTTGATGTCGAGCGTTTGG
rJMFF004P08+ GGAGTTGGACAGATTTCAACCATGAAATTTNGGNTATTGTGCTTGATGTCGAGCGTTTGG
____________________________________________________________
consensus GGAGTTGGACAGATTTCAACCATGAAATTTCGGCTATTGTGCTTGATGTCGAGCGTTTGG
. : . : . : . : . : . :
rJMSF035J18+ TCTTTAAAGACTTAATTGGCGAAATAGTGAGAGGCGAGGGCGATAACTTGAGGAACAAAC
rJMSF007F19+ TCTTTAAAGACTTAATTGGCGAAATAGTGAGAGGCGAGGGCGATAACTTGAGGAACAAAC
rJMSF035G18+ TCTTTAAAGACTTAATTGGCGAAATAGTGAGAGGCGAGGGCGATAACNTGAGGAACAAAC
rJMFF032C04+ TCTTTAAAGACTTAATTGGCGAAATAGTGAGAGGCGAGGGCGATAACTTGAGGAACAAAC
rJMSF051J05+ TCTTTAAAGACTTAATTGGNGAAATAGTGAGAGGCGAGGGNGATAACTTGAGGAACAAAC
rJMFF029L14+ TCTTTAAAGACTTAATTGGCGAAATAGTGAGAGGCGAGGGCGATAACTTGAGGAACAAAC
rJMFF004P08+ TNTTTAAAGACTTAATTGGNGAAATAGNGAGAGGNGAGGGNGATAACTTGAGGAACAAAC
____________________________________________________________
consensus TCTTTAAAGACTTAATTGGCGAAATAGTGAGAGGCGAGGGCGATAACTTGAGGAACAAAC
. : . : . : . : . : . :
rJMSF035J18+ CNTCGNGGCGCNGGCNGTTGTTCNCAAAGTAGCTACTTTGTTTCTTTCCTCCNTTTTCAA
rJMSF007F19+ CNTCGAGGCGCNGGCNGTTGTTCNCAAAGTAGCTACTTTGTTTCTTTCCTCCNTTTTCAA
rJMSF035G18+ CNTCGAGGCGCNGGCAGTTGTTCNCAAAGTAGCTACTTTGTTTCTTTCCTCCNTTTTCAA
rJMFF032C04+ CATNGAGGCGCAGGCAGTTGTTCNCAAAGTAGCTACTTTGTTTCTTTCCTCCATTTTCAA
rJMSF051J05+ CNTNGAGGCGCAGGCAGTTGTTCNCAAAGTAGCTACTTTGTTTCTTTCCTCCNNTTTCAA
rJMFF029L14+ CATCGAGGCGCAGGCAGTTGTTCACAAAGTAGCTACTTTGTTTNTTTCCTCCATTTTCAA
rJMSF025H23+ GTTGTTCNCAAAGNAGNTACTTTGTTTNTNTCCTCCNTTTTCAA
rJMFF004P08+ CATNGAGGNGCAGGCAGTTGTTCNCAAAGTAGNTACTTTGTTTNTTTCCTCCATTTTCAA
____________________________________________________________
consensus CATCGAGGCGCAGGCAGTTGTTCACAAAGTAGCTACTTTGTTTCTTTCCTCCATTTTCAA
. : . : . : . : . : . :
rJMSF035J18+ TGCTTCGNGTCGGTCNGTAATTTCCCNTCTCG-TTTTTTTTTTTCCCTGATTTTTATCGG
rJMSF007F19+ TGCTTCGTGTCGGTCNGTAATTTCCCNTCTCG-TTTTTTTTTTTCCCTGATTTTTATCGG
rJMSF035G18+ TGCTTCGNGTCGGTCNGTAATTTCCCNTCTCG-TTTTTTTTTTTCCCTGATTTTTATCGG
rJMFF032C04+ TGCTTCGTGTCGGTCAGTAATTTCCCATCTCG--TTTTTTTTTTCCCTGATTTTTATCGG
rJMSF051J05+ TGNTTCGNGTCGGTCCGTAATTNCCCNTCTCG-NTTTTTTTTTTCCCTGATTTTTATCGN
rJMFF029L14+ TGCTTCGTGTCGGTCAGTAATTTCCCATNTCG--TTTTTTTTTTCCCTGATTTTTATCGG
rJMSF025H23+ NGNTTCGNGTCGGTCNGTAATTTCCCNTCTCGNTTTTTTTTTTTCCCTGATTTTTATCGG
rJMFF004P08+ TGNTTNGNGTCGGTCAGTAATTTCCCATTTNG-TTTTTTTTTTTCCCTGATTTTTATCGG
____________________________________________________________
consensus TGCTTCGTGTCGGTCAGTAATTTCCCATCTCG-TTTTTTTTTTTCCCTGATTTTTATCGG
. : . : . : . : . : . :
rJMSF035J18+ CTTTGTAATGAGTATGATTATATGAAGAACGCGAAAGTGCAG-TTGGATGGATTTTGAAG
rJMSF007F19+ CTTTGTAATGAGTATGATTATATGAAGAACGCGAAAGTGCAG-TTGGATGGATTTTGAAG
rJMSF035G18+ CTTTGTAATGAGTATGATTATATGAAGAACGCGAAAGTGCAG-TTGGATGGATTTTGAAG
rJMFF032C04+ CTTTGTAATGAGTATGATTATATGAAGAACGCGAAAGTGCAG-TTGGATGGATTTTGAAG
rJMSF051J05+ CTTTGNGATGAGTATGATTATATGAAGAACGCGAAAGTGCAGCTTGGATGGATTTTGAAG
rJMFF029L14+ CTTTGTAATGAGTATGATTATATGAAGAACGCGAAAGTGCAG-TTGGATGGATTTTGAAG
rJMSF025H23+ CTTTGTAATGAGTATGATTATATGAAGAACGCGAAAGTGCAG-TTGGATGGATTTTGAAG
rJMFF004P08+ CTTTGTAATGAGTATGATTATATGAAGAACGCGAAAGTGCAG-TTGGATGGATTTTGAAG
____________________________________________________________
consensus CTTTGTAATGAGTATGATTATATGAAGAACGCGAAAGTGCAG-TTGGATGGATTTTGAAG
. : . : . : . : . : . :
rJMSF035J18+ GAAAATCTTTCCAG
rJMSF007F19+ GAAAATCTTTCCAGTT
rJMSF035G18+ GAAAATCTTTCCAGTTTCCACTCAAGTG
rJMFF032C04+ GAAAATCTTTCCAGTTTCCACTCAAGTGTACTAACAGTATACTGATAGTGATGTCAATCT
rJMSF051J05+ GAAAATCTTTCCAGTTTCCACTCAAGTGTACTAAC
rJMFF029L14+ GAAAATCTTTCCAGTTTCCACTCAAGTGTACTAACAGTATACTGATAGTGATGTCAATCT
rJMSF025H23+ GAAAATCTTTCCAGTTTCCACTCAAGTGTACTAACAGTATACTGATAGTGATGTCAATCT
rJMFF004P08+ GAAAATCTTTCCAGTTTCCACTCAAGTGTACTAACAGTATACTGATAGTGATGTCAATCT
____________________________________________________________
consensus GAAAATCTTTCCAGTTTCCACTCAAGTGTACTAACAGTATACTGATAGTGATGTCAATCT
. : . : . : . : . : . :
rJMFF032C04+ GTTCAAAACCACCTTGTATATCTCTTCCCAGA
rJMFF029L14+ GTTCAAAACCACCTTGTATATCTCTTCCCAGAATTCTCTTTAGCTTAGAGCTCTGATTTC
rJMSF025H23+ GTTCAAAACCACCTTGTATATCTCTTCCCAGAATTCTCTTTAGCTTAGAGCTCTGAT
rJMFF004P08+ GTTCAAAACCACCTTGTATATCTCTTCCCAGAATTCTCTTTAGCTTAGAGCTCTGATTTC
____________________________________________________________
consensus GTTCAAAACCACCTTGTATATCTCTTCCCAGAATTCTCTTTAGCTTAGAGCTCTGATTTC
. : . : . : . : . : . :
rJMFF029L14+ CTGTCATTCAATGCTTAAAT
rJMFF004P08+ CTGTCATTCAATGCTTAAATTTGGACAGTGTGCTTCAGCTTTTCATTTCTGGTTTTATAT
____________________________________________________________
consensus CTGTCATTCAATGCTTAAATTTGGACAGTGTGCTTCAGCTTTTCATTTCTGGTTTTATAT
. : . : . : . : . : . :
rJMFF004P08+ GAATGGCAGTGTAGTAACAGATTTGTGAATACTTCTTTCAGTAGCTCAAAATTTACAGTT
____________________________________________________________
consensus GAATGGCAGTGTAGTAACAGATTTGTGAATACTTCTTTCAGTAGCTCAAAATTTACAGTT