Contig 001029:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004J19Sequence490001029 (2)gb|KJB57175.1|7e-13hypothetical protein B456_009G152200 [Gossypium raimondii]
JMSF030C14Sequence653016814ref|XP_006367891.1|2e-78PREDICTED: uncharacterized protein At4g19900-like [Solanum tuberosum]733001029 (2)ref|XP_009603065.1|6e-51PREDICTED: uncharacterized protein At4g19900-like isoform X1 [Nicotiana tomento

Alignment

This contig is upended


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rJMSF030C14+                                    CTGACATCATAGNGTTGAACCANCTTTCTTCACT
                      ____________________________________________________________
consensus                                       CTGACATCATAGNGTTGAACCANCTTTCTTCACT
 
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rJMSF030C14+          TAATAATACTGNTGGCATGGATGAAGGGATGGATGGAAACACTTTGAGTGGCGCTGTGAT
                      ____________________________________________________________
consensus             TAATAATACTGNTGGCATGGATGAAGGGATGGATGGAAACACTTTGAGTGGCGCTGTGAT
 
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rJMSF030C14+          GGCATTCAGAAAGCATAGTCCCTTTATAATGGAGTGTTTGAATGAGTTCTATTCATCATA
                      ____________________________________________________________
consensus             GGCATTCAGAAAGCATAGTCCCTTTATAATGGAGTGTTTGAATGAGTTCTATTCATCATA
 
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rJMSF030C14+          TGATGACTCACAATTGAGGTGGAATGGAGCCGAGCTTTTGATTAGAGTTGCTTAACTTTT
                      ____________________________________________________________
consensus             TGATGACTCACAATTGAGGTGGAATGGAGCCGAGCTTTTGATTAGAGTTGCTTAACTTTT
 
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rJMSF030C14+          CAAGTAATGATAATGTCTCCAACAAAAATATGGAGCTTAGATTGCAACCATCCTCTCTTT
                      ____________________________________________________________
consensus             CAAGTAATGATAATGTCTCCAACAAAAATATGGAGCTTAGATTGCAACCATCCTCTCTTT
 
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rJMSF030C14+          TCTTCCCAATAAGTCATGGCAATATTCTAAGATACTTAACTGCACCAGTTACAGAAAGTG
rJMFF004J19+                                                            ACAGAAAGTG
                      ____________________________________________________________
consensus             TCTTCCCAATAAGTCATGGCAATATTCTAAGATACTTAACTGCACCAGTTACAGAAAGTG
 
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rJMSF030C14+          AAAGATCTGAACAAGATGCTCTCTTTAAAAAGATCCNTGATGAGTCTCTCACATTTCACT
rJMFF004J19+          AAAGATTTGAACAAGATGCTNTCTTTAAAAAGATCCNTGANGAGTNTTTCNCNTTTCACT
                      ____________________________________________________________
consensus             AAAGATTTGAACAAGATGCTCTCTTTAAAAAGATCCNTGATGAGTCTTTCACATTTCACT
 
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rJMSF030C14+          TATGGAATAGCATAACCTCAGCCACTGTTCCAGAGCCTAACAGCCTTGTAGCCCGGATTA
rJMFF004J19+          TATGGAATAGCATNACCTCAGCCACTGTTCCAGANCCTNACANCCTTGTAGCCCGGATTA
                      ____________________________________________________________
consensus             TATGGAATAGCATAACCTCAGCCACTGTTCCAGAGCCTAACAGCCTTGTAGCCCGGATTA
 
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rJMSF030C14+          TAAATCATCACTGTCTTCACTGCTCCGAAGAATTGTAGTATACACAGTAAGCGATCGTTC
rJMFF004J19+          TAAATCATCACTGTNTTCACTGCTCCGAAGAATTGTAGTATNCNCAGTAAGCGATNGTTC
                      ____________________________________________________________
consensus             TAAATCATCACTGTCTTCACTGCTCCGAAGAATTGTAGTATACACAGTAAGCGATCGTTC
 
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rJMSF030C14+          ATGGCTTCGTTGAATGCTTCTATACTTGCTCCGCTGAATTCCTAGTAAACGGAAACATTA
rJMFF004J19+          ATGGNTTCGTTGAATGCTTNTATACTTGCTCCGGTGAATTCCTAGTNAACGGAAACATTA
                      ____________________________________________________________
consensus             ATGGCTTCGTTGAATGCTTCTATACTTGCTCCGGTGAATTCCTAGTAAACGGAAACATTA
 
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rJMSF030C14+          CGAGCTGGTTGATTAATGCATTATGCTGTACAGTCGAAATTGCCCNTGGATTTTGGCAAG
rJMFF004J19+          CGAGCTGGTTGANTAATGCATTATGCTGTACAGTNGAAATTGCCCTTGGATTTTGGCAAG
                      ____________________________________________________________
consensus             CGAGCTGGTTGATTAATGCATTATGCTGTACAGTCGAAATTGCCCTTGGATTTTGGCAAG
 
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rJMSF030C14+          TCTTTGCTATGGTGATGGCATCTTGAGTTCCAAGTAGCTTTGTGAGAAATGTGATGCTTT
rJMFF004J19+          TCTTTGCTATGGNGANGGCATNTTGAGTTCCAAGTAGCTTTGTGAGAAATGTGATGCTTT
                      ____________________________________________________________
consensus             TCTTTGCTATGGTGATGGCATCTTGAGTTCCAAGTAGCTTTGTGAGAAATGTGATGCTTT
 
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rJMSF030C14+          GGATGGAGGTTGTAATAGGTTTTTTTT                                 
rJMFF004J19+          GGATGGANGTTGTAATAGGTTTTTTTTTTGACAAGTCATGTAAAGTATTATTTTTATTTT
                      ____________________________________________________________
consensus             GGATGGAGGTTGTAATAGGTTTTTTTTTTGACAAGTCATGTAAAGTATTATTTTTATTTT
 
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rJMFF004J19+          GAAGAAAGAGTTCACCATATAGAGAGATATGATTGAAATTAAAATGGAAAATATTTACAT
                      ____________________________________________________________
consensus             GAAGAAAGAGTTCACCATATAGAGAGATATGATTGAAATTAAAATGGAAAATATTTACAT