| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP007C11 | Sequence | 349 | 001026 (6) | emb|CBI22296.3| | 4e-61 | unnamed protein product [Vitis vinifera] | |||||
| JMFF004B05 | Sequence | 541 | 003531 (5) | ref|XP_009775818.1| | 2e-56 | PREDICTED: probable mitochondrial-processing peptidase subunit beta [Nicotiana | 583 | 001026 (6) | ref|XP_011085735.1| | 4e-36 | PREDICTED: probable mitochondrial-processing peptidase subunit beta [Sesamum in |
| JMFN014J18 | Sequence | 627 | 001026 (6) | ref|XP_009610110.1| | 2e-76 | PREDICTED: probable mitochondrial-processing peptidase subunit beta [Nicotiana | |||||
| JMSF004L06 | Sequence | 437 | 003531 (5) | ref|XP_009775818.1| | 5e-35 | PREDICTED: probable mitochondrial-processing peptidase subunit beta [Nicotiana | 262 | 001026 (6) | |||
| JMSF015B20 | Sequence | 231 | 003531 (5) | 686 | 001026 (6) | emb|CBI22296.3| | 1e-62 | unnamed protein product [Vitis vinifera] | |||
| JMSF022J15 | Sequence | 656 | 003531 (5) | ref|XP_009610110.1| | 9e-77 | PREDICTED: probable mitochondrial-processing peptidase subunit beta [Nicotiana | 653 | 001026 (6) | emb|CBI22296.3| | 2e-55 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMFN014J18- TCATTTGTGACCAGTTACATGCAACTGCATTCCAGTACACTCCTTTGGG
____________________________________________________________
consensus TCATTTGTGACCAGTTACATGCAACTGCATTCCAGTACACTCCTTTGGG
. : . : . : . : . : . :
JMFN014J18- TAGAACTGTTATTGGATCTGCCGAGAACATAAAGAAAATTTCGAAGGAGGACATTCAGAA
____________________________________________________________
consensus TAGAACTGTTATTGGATCTGCCGAGAACATAAAGAAAATTTCGAAGGAGGACATTCAGAA
. : . : . : . : . : . :
JMFN014J18- TTACATTTCAACCCATTATGCAGCGCATAGAATGGAGATTTCTGCTGCTGGAGCTGTTAA
____________________________________________________________
consensus TTACATTTCAACCCATTATGCAGCGCATAGAATGGAGATTTCTGCTGCTGGAGCTGTTAA
. : . : . : . : . : . :
JMFN014J18- ACATGAGGATTTTGTTGAACAAGTGAAGAAGTTTTTCACCAAACTAXXXXXXXXXXXXXX
____________________________________________________________
consensus ACATGAGGATTTTGTTGAACAAGTGAAGAAGTTTTTCACCAAACTANNNNNNNNNNNNNN
. : . : . : . : . : . :
JMFN014J18- XXXXXCGCCTCAGTTGGTTGCAAATAACCCATCAATATTCACTGGTTCAGAGGTTCGAAT
____________________________________________________________
consensus NNNNNCGCCTCAGTTGGTTGCAAATAACCCATCAATATTCACTGGTTCAGAGGTTCGAAT
. : . : . : . : . : . :
JMFN014J18- TATTGATGATCTGCCTCTTGCTCAATTTGCGGTTGCCTTCAACGGAGCATCATGGACAGA
____________________________________________________________
consensus TATTGATGATCTGCCTCTTGCTCAATTTGCGGTTGCCTTCAACGGAGCATCATGGACAGA
. : . : . : . : . : . :
JMFN014J18- CCCTGATTCCACTGCTTTGATGGTCTTGCAACAAATGTTTGGTTCATGGAACAAAAGCTG
____________________________________________________________
consensus CCCTGATTCCACTGCTTTGATGGTCTTGCAACAAATGTTTGGTTCATGGAACAAAAGCTG
. : . : . : . : . : . :
JMFN014J18- TGGAGGGGGGAAGCACATGGGTTCAGCGCTTGTACAAAGAGTGGCCATTAATGAGATAGG
rJMCP007C11- ATGAGATAGG
____________________________________________________________
consensus TGGAGGGGGGAAGCACATGGGTTCAGCGCTTGTACAAAGAGTGGCCATTAATGAGATAGG
. : . : . : . : . : . :
JMFN014J18- TGAGAGTGTGACGGGTTTTAACATCAACTATAAAGACACGGGGCTTTTTGGCGTCTATGC
rJMCP007C11- TGAGAGTGTGAgccGTTTTAAgtagttgatatAActgtgccGGgaaTTTGGgcagatacg
rJMSF015B20+ GTGTGACGGGTTTTAACATCAACTATAAAGACNCGGGGCTTTTTGGCGTNTATGC
rJMSF022J15+ CGGGGCTTTTTGGCGTNTATGC
____________________________________________________________
consensus TGAGAGTGTGACGGGTTTTAACATCAACTATAAAGACACGGGGCTTTTTGGCGTCTATGC
. : . : . : . : . : . :
JMFN014J18- TGAAGCC
rJMCP007C11- acttcgggtcggacATTGgaaccATGACTTtcgaataagttatATGTATGAGATATGgtt
rJMSF015B20+ TGAAGCCAAGCCTGACTGCTTGGATGACTTAGCTTATTCAATAATGTATGAGATATGCAA
rJMSF022J15+ TGAAGCCAAGCCTGATTGCTTGGATGACTTAGCTTATTCAATAATGTATGAGATATGCAA
____________________________________________________________
consensus TGAAGCCAAGCCTGATTGCTTGGATGACTTAGCTTATTCAATAATGTATGAGATATGCAA
. : . : . : . : . : . :
rJMCP007C11- GTTATcgatggctcaATCTGAtcgactaGTTATTCGTGCTCGTAtagtcgaAAAtagaag
rJMSF015B20+ GTTATGCTACCGNGTATNTGAAGCTGANGTTATTCGNGCTCGTAATCAGCTAAAATNTTC
rJMSF022J15+ GTTATGCTACCGNGTATNTGAAGNTGANGTTATTCGNGCTCGTAATCAGCTAAAATNTTC
rJMFF004B05+ GTTATTCGNGCTNGTAATCAGCTAAAATTTTC
____________________________________________________________
consensus GTTATGCTACCGAGTATCTGAAGCTGATGTTATTCGTGCTCGTAATCAGCTAAAATTTTC
. : . : . : . : . : . :
rJMCP007C11- gaaGAatgaggtttaTAATGGtagttGTGCTACTGCTGAAGAAATCGGACAagtcaTAAT
rJMSF015B20+ CNTGATACTCCAAATTAATGGATCAAGNGCTACTGCTGAAGAAATCGGACNTCAGTTAAT
rJMSF022J15+ CNTGATACTCCAAATTAATGGATCAAGNGNTACTGCTGAAGAAATNGGACNTCAGTTAAT
rJMFF004B05+ GNTGATACTCCAAATTAATGGATCAAGNGNTNCTGNTGAGGAAATNGGACATCAGTTAAT
____________________________________________________________
consensus CTTGATACTCCAAATTAATGGATCAAGTGCTACTGCTGAAGAAATCGGACATCAGTTAAT
. : . : . : . : . : . :
rJMCP007C11- AACCTATGGCCGAAGAATaggtatTGCTGAGTTATTTcggtccATTGATGCTGTGGATcg
rJMSF015B20+ AACCTATGGCCGAAGAATTCCATATGNTGAGTTATTTGCCNGGATTGATGCTGNGGATGC
rJMSF022J15+ AACCTATGGCCGAAGAATTCCATATGNTGAGTTATTTGCCNGGATTGATGCTGNGGATGC
rJMFF004B05+ AACCTATGGCCGAAGAATTCCATATGCTGAGTTATTTGCCAGGATTGATGCTGNGGATGC
____________________________________________________________
consensus AACCTATGGCCGAAGAATTCCATATGCTGAGTTATTTGCCAGGATTGATGCTGTGGATGC
. : . : . : . : . : . :
rJMCP007C11- gtcgtggtatAAAAGAGTTcggttggGTTTTATTTTTGA
rJMSF015B20+ CNGCCCCNTAAAAAGAGTTGCCNACCGTTTTATTTTTGACCGGGAAATTGCAATTGCAGC
rJMSF022J15+ CAGCCCCNTAAAAAGAGTTGCCNACCGTTTTATTTTTGACCGGGAAATTGCAATTGCAGC
rJMFF004B05+ CAGCNCCATAAAAAGAGTTGCCAACCGTTTTATTTTTGACCGGGAAATTGCAATTGCAGC
____________________________________________________________
consensus CAGCCCCATAAAAAGAGTTGCCAACCGTTTTATTTTTGACCGGGAAATTGCAATTGCAGC
. : . : . : . : . : . :
rJMSF015B20+ AAGGGGAGCGATTCAGGGCTACTTACCCGATTACAACTGGTTTAGACGCNGGACATACNG
rJMSF022J15+ AAGGGGAGNGATTCAGGGNTACTTACCCGATTACAACTGGTTTAGACNCNGGACATACNG
rJMFF004B05+ AAGGGGAGNGATTCAGGGNTACTTNCCCGATTACAACTGGTTTAGACGCAGGACATNCTG
____________________________________________________________
consensus AAGGGGAGCGATTCAGGGCTACTTACCCGATTACAACTGGTTTAGACGCAGGACATACTG
. : . : . : . : . : . :
rJMSF015B20+ GNTGCGNTACTAAACCTTTATTCCTTTGCCCGCTTTTTTTTTTTTCTGTTATATTTCTGT
rJMSF004L06+ TTTTTTTTTTTCTGTTATATTTCTGT
rJMSF022J15+ GNTGCGNTACTAAACCNTTATTCCTTTGCCCGCTTTTTTTTTTTTCTGTTATATTTCTGT
rJMFF004B05+ GNTGCGNTNCTAAACCTTTATTCCTTTGCCCGCTTTTTTTTTTTTCTGTTATATTTCTGT
____________________________________________________________
consensus GNTGCGNTACTAAACCTTTATTCCTTTGCCCGCTTTTTTTTTTTTCTGTTATATTTCTGT
. : . : . : . : . : . :
rJMSF015B20+ AACGCGGTTTTTCTTCAAGAGCCTGTGTTAGGCATCATAACACTCAGAGTCTGCACAAGT
rJMSF004L06+ AACGCGGTTTTTCTTCAAGAGCCTGTGTTAGGCATCATAACACTCAGAGTCTGCACAAGT
rJMSF022J15+ AACGCGGTTTTTCTTCAAGAGCCTGTGTTAGGCATCATAACACTCAGAGTCTGCACAAGT
rJMFF004B05+ AACGCGGTTTTTCTTCA---GCCTGTGTTAGGCATCATAACACTCAGAGTCTGCACAAGT
____________________________________________________________
consensus AACGCGGTTTTTCTTCAAGAGCCTGTGTTAGGCATCATAACACTCAGAGTCTGCACAAGT
. : . : . : . : . : . :
rJMSF015B20+ TTTGGTGGAAATAAGTTGGTTTTTTCTGGGATCACCTTCTAGCTTTTGTACAAATGGTGA
rJMSF004L06+ TTTGGTGGAAATAAGTTGGTTTTTTCTGGGATCACCTTCTAGCTTTTGTACAAATGGTGA
rJMSF022J15+ TTTGGTGGAAATAAGTTGGTTTTTTCTGGGATCACCTTCTAGCTTTTGTACAAATGGTGA
rJMFF004B05+ TTTGGTGGAAATAAGTTGGTTTTTTCTGGGATCACCTTCTAGCTTTTGTACAAATGGTGA
____________________________________________________________
consensus TTTGGTGGAAATAAGTTGGTTTTTTCTGGGATCACCTTCTAGCTTTTGTACAAATGGTGA
. : . : . : . : . : . :
rJMSF015B20+ TGTATCAAGTCTCAGTAATGAGCATTATATTGTTTCTTTTGCAGAACTGGTAGCAATTGG
rJMSF004L06+ TGTATCAAGTCTCAGTAATGAGCATTATATTGTTTCTTTTGCAGAACTGGTAGCAATTGG
rJMSF022J15+ TGTATCAAGTCTCAGTAATGAGCATTATATTGTTTCTTTTGCAGAACTGGTAGCAATTGG
rJMFF004B05+ TGTATCAAGTCTCAGTAATGAGCATTATATTGTTTCTTTTGCAGAACTGGTAGCAATTGG
____________________________________________________________
consensus TGTATCAAGTCTCAGTAATGAGCATTATATTGTTTCTTTTGCAGAACTGGTAGCAATTGG
. : . : . : . : . : . :
rJMSF015B20+ G
rJMSF004L06+ G
rJMSF022J15+ G
rJMFF004B05+ GTGATTGTATGTTTTGGTGCTATGAAAATGTAACTATTTTATAGCTACTGGAAATAAGAG
____________________________________________________________
consensus GTGATTGTATGTTTTGGTGCTATGAAAATGTAACTATTTTATAGCTACTGGAAATAAGAG