Contig 001026:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP007C11Sequence349001026 (6)emb|CBI22296.3|4e-61unnamed protein product [Vitis vinifera]
JMFF004B05Sequence541003531 (5)ref|XP_009775818.1|2e-56PREDICTED: probable mitochondrial-processing peptidase subunit beta [Nicotiana 583001026 (6)ref|XP_011085735.1|4e-36PREDICTED: probable mitochondrial-processing peptidase subunit beta [Sesamum in
JMFN014J18Sequence627001026 (6)ref|XP_009610110.1|2e-76PREDICTED: probable mitochondrial-processing peptidase subunit beta [Nicotiana
JMSF004L06Sequence437003531 (5)ref|XP_009775818.1|5e-35PREDICTED: probable mitochondrial-processing peptidase subunit beta [Nicotiana 262001026 (6)
JMSF015B20Sequence231003531 (5)686001026 (6)emb|CBI22296.3|1e-62unnamed protein product [Vitis vinifera]
JMSF022J15Sequence656003531 (5)ref|XP_009610110.1|9e-77PREDICTED: probable mitochondrial-processing peptidase subunit beta [Nicotiana 653001026 (6)emb|CBI22296.3|2e-55unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN014J18- TCATTTGTGACCAGTTACATGCAACTGCATTCCAGTACACTCCTTTGGG
                      ____________________________________________________________
consensus TCATTTGTGACCAGTTACATGCAACTGCATTCCAGTACACTCCTTTGGG
 
. : . : . : . : . : . :
JMFN014J18- TAGAACTGTTATTGGATCTGCCGAGAACATAAAGAAAATTTCGAAGGAGGACATTCAGAA
                      ____________________________________________________________
consensus TAGAACTGTTATTGGATCTGCCGAGAACATAAAGAAAATTTCGAAGGAGGACATTCAGAA
 
. : . : . : . : . : . :
JMFN014J18- TTACATTTCAACCCATTATGCAGCGCATAGAATGGAGATTTCTGCTGCTGGAGCTGTTAA
                      ____________________________________________________________
consensus TTACATTTCAACCCATTATGCAGCGCATAGAATGGAGATTTCTGCTGCTGGAGCTGTTAA
 
. : . : . : . : . : . :
JMFN014J18- ACATGAGGATTTTGTTGAACAAGTGAAGAAGTTTTTCACCAAACTAXXXXXXXXXXXXXX
                      ____________________________________________________________
consensus ACATGAGGATTTTGTTGAACAAGTGAAGAAGTTTTTCACCAAACTANNNNNNNNNNNNNN
 
. : . : . : . : . : . :
JMFN014J18- XXXXXCGCCTCAGTTGGTTGCAAATAACCCATCAATATTCACTGGTTCAGAGGTTCGAAT
                      ____________________________________________________________
consensus NNNNNCGCCTCAGTTGGTTGCAAATAACCCATCAATATTCACTGGTTCAGAGGTTCGAAT
 
. : . : . : . : . : . :
JMFN014J18- TATTGATGATCTGCCTCTTGCTCAATTTGCGGTTGCCTTCAACGGAGCATCATGGACAGA
                      ____________________________________________________________
consensus TATTGATGATCTGCCTCTTGCTCAATTTGCGGTTGCCTTCAACGGAGCATCATGGACAGA
 
. : . : . : . : . : . :
JMFN014J18- CCCTGATTCCACTGCTTTGATGGTCTTGCAACAAATGTTTGGTTCATGGAACAAAAGCTG
                      ____________________________________________________________
consensus CCCTGATTCCACTGCTTTGATGGTCTTGCAACAAATGTTTGGTTCATGGAACAAAAGCTG
 
. : . : . : . : . : . :
JMFN014J18- TGGAGGGGGGAAGCACATGGGTTCAGCGCTTGTACAAAGAGTGGCCATTAATGAGATAGG
rJMCP007C11- ATGAGATAGG
                      ____________________________________________________________
consensus TGGAGGGGGGAAGCACATGGGTTCAGCGCTTGTACAAAGAGTGGCCATTAATGAGATAGG
 
. : . : . : . : . : . :
JMFN014J18- TGAGAGTGTGACGGGTTTTAACATCAACTATAAAGACACGGGGCTTTTTGGCGTCTATGC
rJMCP007C11- TGAGAGTGTGAgccGTTTTAAgtagttgatatAActgtgccGGgaaTTTGGgcagatacg
rJMSF015B20+ GTGTGACGGGTTTTAACATCAACTATAAAGACNCGGGGCTTTTTGGCGTNTATGC
rJMSF022J15+ CGGGGCTTTTTGGCGTNTATGC
                      ____________________________________________________________
consensus TGAGAGTGTGACGGGTTTTAACATCAACTATAAAGACACGGGGCTTTTTGGCGTCTATGC
 
. : . : . : . : . : . :
JMFN014J18- TGAAGCC
rJMCP007C11- acttcgggtcggacATTGgaaccATGACTTtcgaataagttatATGTATGAGATATGgtt
rJMSF015B20+ TGAAGCCAAGCCTGACTGCTTGGATGACTTAGCTTATTCAATAATGTATGAGATATGCAA
rJMSF022J15+ TGAAGCCAAGCCTGATTGCTTGGATGACTTAGCTTATTCAATAATGTATGAGATATGCAA
                      ____________________________________________________________
consensus TGAAGCCAAGCCTGATTGCTTGGATGACTTAGCTTATTCAATAATGTATGAGATATGCAA
 
. : . : . : . : . : . :
rJMCP007C11- GTTATcgatggctcaATCTGAtcgactaGTTATTCGTGCTCGTAtagtcgaAAAtagaag
rJMSF015B20+ GTTATGCTACCGNGTATNTGAAGCTGANGTTATTCGNGCTCGTAATCAGCTAAAATNTTC
rJMSF022J15+ GTTATGCTACCGNGTATNTGAAGNTGANGTTATTCGNGCTCGTAATCAGCTAAAATNTTC
rJMFF004B05+ GTTATTCGNGCTNGTAATCAGCTAAAATTTTC
                      ____________________________________________________________
consensus GTTATGCTACCGAGTATCTGAAGCTGATGTTATTCGTGCTCGTAATCAGCTAAAATTTTC
 
. : . : . : . : . : . :
rJMCP007C11- gaaGAatgaggtttaTAATGGtagttGTGCTACTGCTGAAGAAATCGGACAagtcaTAAT
rJMSF015B20+ CNTGATACTCCAAATTAATGGATCAAGNGCTACTGCTGAAGAAATCGGACNTCAGTTAAT
rJMSF022J15+ CNTGATACTCCAAATTAATGGATCAAGNGNTACTGCTGAAGAAATNGGACNTCAGTTAAT
rJMFF004B05+ GNTGATACTCCAAATTAATGGATCAAGNGNTNCTGNTGAGGAAATNGGACATCAGTTAAT
                      ____________________________________________________________
consensus CTTGATACTCCAAATTAATGGATCAAGTGCTACTGCTGAAGAAATCGGACATCAGTTAAT
 
. : . : . : . : . : . :
rJMCP007C11- AACCTATGGCCGAAGAATaggtatTGCTGAGTTATTTcggtccATTGATGCTGTGGATcg
rJMSF015B20+ AACCTATGGCCGAAGAATTCCATATGNTGAGTTATTTGCCNGGATTGATGCTGNGGATGC
rJMSF022J15+ AACCTATGGCCGAAGAATTCCATATGNTGAGTTATTTGCCNGGATTGATGCTGNGGATGC
rJMFF004B05+ AACCTATGGCCGAAGAATTCCATATGCTGAGTTATTTGCCAGGATTGATGCTGNGGATGC
                      ____________________________________________________________
consensus AACCTATGGCCGAAGAATTCCATATGCTGAGTTATTTGCCAGGATTGATGCTGTGGATGC
 
. : . : . : . : . : . :
rJMCP007C11- gtcgtggtatAAAAGAGTTcggttggGTTTTATTTTTGA
rJMSF015B20+ CNGCCCCNTAAAAAGAGTTGCCNACCGTTTTATTTTTGACCGGGAAATTGCAATTGCAGC
rJMSF022J15+ CAGCCCCNTAAAAAGAGTTGCCNACCGTTTTATTTTTGACCGGGAAATTGCAATTGCAGC
rJMFF004B05+ CAGCNCCATAAAAAGAGTTGCCAACCGTTTTATTTTTGACCGGGAAATTGCAATTGCAGC
                      ____________________________________________________________
consensus CAGCCCCATAAAAAGAGTTGCCAACCGTTTTATTTTTGACCGGGAAATTGCAATTGCAGC
 
. : . : . : . : . : . :
rJMSF015B20+ AAGGGGAGCGATTCAGGGCTACTTACCCGATTACAACTGGTTTAGACGCNGGACATACNG
rJMSF022J15+ AAGGGGAGNGATTCAGGGNTACTTACCCGATTACAACTGGTTTAGACNCNGGACATACNG
rJMFF004B05+ AAGGGGAGNGATTCAGGGNTACTTNCCCGATTACAACTGGTTTAGACGCAGGACATNCTG
                      ____________________________________________________________
consensus AAGGGGAGCGATTCAGGGCTACTTACCCGATTACAACTGGTTTAGACGCAGGACATACTG
 
. : . : . : . : . : . :
rJMSF015B20+ GNTGCGNTACTAAACCTTTATTCCTTTGCCCGCTTTTTTTTTTTTCTGTTATATTTCTGT
rJMSF004L06+ TTTTTTTTTTTCTGTTATATTTCTGT
rJMSF022J15+ GNTGCGNTACTAAACCNTTATTCCTTTGCCCGCTTTTTTTTTTTTCTGTTATATTTCTGT
rJMFF004B05+ GNTGCGNTNCTAAACCTTTATTCCTTTGCCCGCTTTTTTTTTTTTCTGTTATATTTCTGT
                      ____________________________________________________________
consensus GNTGCGNTACTAAACCTTTATTCCTTTGCCCGCTTTTTTTTTTTTCTGTTATATTTCTGT
 
. : . : . : . : . : . :
rJMSF015B20+ AACGCGGTTTTTCTTCAAGAGCCTGTGTTAGGCATCATAACACTCAGAGTCTGCACAAGT
rJMSF004L06+ AACGCGGTTTTTCTTCAAGAGCCTGTGTTAGGCATCATAACACTCAGAGTCTGCACAAGT
rJMSF022J15+ AACGCGGTTTTTCTTCAAGAGCCTGTGTTAGGCATCATAACACTCAGAGTCTGCACAAGT
rJMFF004B05+ AACGCGGTTTTTCTTCA---GCCTGTGTTAGGCATCATAACACTCAGAGTCTGCACAAGT
                      ____________________________________________________________
consensus AACGCGGTTTTTCTTCAAGAGCCTGTGTTAGGCATCATAACACTCAGAGTCTGCACAAGT
 
. : . : . : . : . : . :
rJMSF015B20+ TTTGGTGGAAATAAGTTGGTTTTTTCTGGGATCACCTTCTAGCTTTTGTACAAATGGTGA
rJMSF004L06+ TTTGGTGGAAATAAGTTGGTTTTTTCTGGGATCACCTTCTAGCTTTTGTACAAATGGTGA
rJMSF022J15+ TTTGGTGGAAATAAGTTGGTTTTTTCTGGGATCACCTTCTAGCTTTTGTACAAATGGTGA
rJMFF004B05+ TTTGGTGGAAATAAGTTGGTTTTTTCTGGGATCACCTTCTAGCTTTTGTACAAATGGTGA
                      ____________________________________________________________
consensus TTTGGTGGAAATAAGTTGGTTTTTTCTGGGATCACCTTCTAGCTTTTGTACAAATGGTGA
 
. : . : . : . : . : . :
rJMSF015B20+ TGTATCAAGTCTCAGTAATGAGCATTATATTGTTTCTTTTGCAGAACTGGTAGCAATTGG
rJMSF004L06+ TGTATCAAGTCTCAGTAATGAGCATTATATTGTTTCTTTTGCAGAACTGGTAGCAATTGG
rJMSF022J15+ TGTATCAAGTCTCAGTAATGAGCATTATATTGTTTCTTTTGCAGAACTGGTAGCAATTGG
rJMFF004B05+ TGTATCAAGTCTCAGTAATGAGCATTATATTGTTTCTTTTGCAGAACTGGTAGCAATTGG
                      ____________________________________________________________
consensus TGTATCAAGTCTCAGTAATGAGCATTATATTGTTTCTTTTGCAGAACTGGTAGCAATTGG
 
. : . : . : . : . : . :
rJMSF015B20+ G
rJMSF004L06+ G
rJMSF022J15+ G
rJMFF004B05+ GTGATTGTATGTTTTGGTGCTATGAAAATGTAACTATTTTATAGCTACTGGAAATAAGAG
                      ____________________________________________________________
consensus GTGATTGTATGTTTTGGTGCTATGAAAATGTAACTATTTTATAGCTACTGGAAATAAGAG