| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004A19 | Sequence | 736 | 001025 (3) | ref|XP_009609924.1| | 8e-51 | PREDICTED: uncharacterized protein LOC104103704 isoform X1 [Nicotiana tomentosi | |||||
| JMFF035H05 | Sequence | 523 | 001671 (3) | ref|XP_004245206.2| | 1e-28 | PREDICTED: ras guanine nucleotide exchange factor L isoform X2 [Solanum lycoper | 747 | 001025 (3) | ref|XP_009609924.1| | 4e-51 | PREDICTED: uncharacterized protein LOC104103704 isoform X1 [Nicotiana tomentosi |
| JMFF039F08 | Sequence | 484 | 001671 (3) | ref|XP_004245206.2| | 6e-20 | PREDICTED: ras guanine nucleotide exchange factor L isoform X2 [Solanum lycoper | 775 | 001025 (3) | ref|XP_009609924.1| | 6e-51 | PREDICTED: uncharacterized protein LOC104103704 isoform X1 [Nicotiana tomentosi |
This contig is upended
. : . : . : . : . : . :
rJMFF039F08+ CATCGTCATCATCTTCATCTTCAAGTTCTTGCCCACGTATATCTGCTTCGCAAGAAGTG
rJMFF035H05+ GCCCACGTATATCTGCTTCGCAAGAAGTG
rJMFF004A19+ TGCTTCGCAAGAAGTG
____________________________________________________________
consensus CATCGTCATCATCTTCATCTTCAAGTTCTTGCCCACGTATATCTGCTTCGCAAGAAGTG
. : . : . : . : . : . :
rJMFF039F08+ CATCCAATGGAGGAAGCTGAGATGGTAAATTCCGGGTTGCATCCCACTCTCGATGACAAG
rJMFF035H05+ CATCCAATGGAGGAAGCTGAGATGGTAAATTCCGGGTTGCATCCCACTCTCGATGACAAG
rJMFF004A19+ CATCCAATGGAGGAAGCTGAGATGGTAAATTCCGGGTTGCATCCCACTCTCGATGACAAG
____________________________________________________________
consensus CATCCAATGGAGGAAGCTGAGATGGTAAATTCCGGGTTGCATCCCACTCTCGATGACAAG
. : . : . : . : . : . :
rJMFF039F08+ GAAATGGCAGAGATCAGGTCAATAGGGGAGCAGCACCAAATGGAGTTGAATGACACCTTG
rJMFF035H05+ GAAATGGCAGAGATCAGGTCAATAGGGGAGCAGCACCAAATGGAGTTGAATGACACCTTG
rJMFF004A19+ GAAATGGCAGAGATCAGGTCAATAGGGGAGCAGCACCAAATGGAGTTGAATGACACCTTG
____________________________________________________________
consensus GAAATGGCAGAGATCAGGTCAATAGGGGAGCAGCACCAAATGGAGTTGAATGACACCTTG
. : . : . : . : . : . :
rJMFF039F08+ AATTTGGCCACTTCAGCTTGGTGGTTCAAGTTCCTGAAAACCACGGAAGTTGACCCTGGC
rJMFF035H05+ AATTTGGCCACTTCAGCTTGGTGGTTCAAGTTCCTGAAAACCACGGAAGTTGACCCTGGC
rJMFF004A19+ AATTTGGCCACTTCAGCTTGGTGGTTCAAGTTCCTGAAAACCGCGGAAGTTGACCCTGGC
____________________________________________________________
consensus AATTTGGCCACTTCAGCTTGGTGGTTCAAGTTCCTGAAAACCACGGAAGTTGACCCTGGC
. : . : . : . : . : . :
rJMFF039F08+ GAAGAGAAAATAAAAAATGTTGAAGATTATGGGTGCTATCCATTTGATGAAGTCATGGAA
rJMFF035H05+ GAAGAGAAAATAAAAAATGTTGAAGATTATGGGTGCTATCCATTTGATGAAGTCATGGAA
rJMFF004A19+ GAAGAGAAAATAAAAAATGTTGAAGATTATGGGTGCTATCCATTTGATGAAGTCATGGAA
____________________________________________________________
consensus GAAGAGAAAATAAAAAATGTTGAAGATTATGGGTGCTATCCATTTGATGAAGTCATGGAA
. : . : . : . : . : . :
rJMFF039F08+ TTCCCAGCCTGGCTGAATGCAAATGAAAGCTGTTTGCAGCAACGCTTGAATGATCACTAC
rJMFF035H05+ TTCCCAGCCTGGCTGAATGCAAATGAAAGCTGTTTGCAGCAACGCTTGAATGATCACTAC
rJMFF004A19+ TTCCCAGCCTGGCTGAATGCAAATGAAAGCTGTTTGCAGCAACGCTTGAATGATCACTAC
____________________________________________________________
consensus TTCCCAGCCTGGCTGAATGCAAATGAAAGCTGTTTGCAGCAACGCTTGAATGATCACTAC
. : . : . : . : . : . :
rJMFF039F08+ TCTGAAGATTACTTCCAAAATCCTGCCTTGCCATGTATGGGTATTGATGAGATTGAAGGA
rJMFF035H05+ TCTGAAGATTACTTCCAAAATCCTGCCTTGCCATGTATGGGTATTGATGAGATTGAAGGA
rJMFF004A19+ TCTGAAGATTACTTCCAAAATCCTGCCTTGCCATGTATGGGTATTGATGAGATTGAAGGA
____________________________________________________________
consensus TCTGAAGATTACTTCCAAAATCCTGCCTTGCCATGTATGGGTATTGATGAGATTGAAGGA
. : . : . : . : . : . :
rJMFF039F08+ AAGGATGTGGAGTGGATAGCCAGAGAAGACTGATCTATCATGCTTTCCTTTCTCAAGCTC
rJMFF035H05+ AAGGATGTGGAGTGGATAGCCAGAGAAGACTGATCTATCATGCTTTCCTTTCTCAAGCTC
rJMFF004A19+ AAGGATGTGGAGTGGATAGCCAGAGAAGACTGATCTATCATGCTTTCCTTTCTCAAGCTC
____________________________________________________________
consensus AAGGATGTGGAGTGGATAGCCAGAGAAGACTGATCTATCATGCTTTCCTTTCTCAAGCTC
. : . : . : . : . : . :
rJMFF039F08+ AAAATTTTGCTTGGGGTGCTTGATGCCCCTATACTTTTAGTTTCTCAGTTTTTCAATTTA
rJMFF035H05+ AAAATTTTGCTTGGGGTGCTTGATGCCCCTATACTTTTAGTTTCTCAGTTTTTCAATTTA
rJMFF004A19+ AAAATTTTGCTTGGGGTGCTTGATGCCCCTATACTTTTAGTTTCTCAGTTTTTCAATTTA
____________________________________________________________
consensus AAAATTTTGCTTGGGGTGCTTGATGCCCCTATACTTTTAGTTTCTCAGTTTTTCAATTTA
. : . : . : . : . : . :
rJMFF039F08+ CTGCTTTAATAAGGGATTGCTAGAATGTGACAGGCCTTTGGTAGAGGATAATAATACCCA
rJMFF035H05+ CTGCTTTAATAAGGGATTGCTAGAATGTGACAGGCCTTTGGTAGAGGATAATAATACCCA
rJMFF004A19+ CTGCTTTAATAAGGGATTGCTAGAATGTGACAGGCCTTTGGTAGAGGATAATAATACCCA
____________________________________________________________
consensus CTGCTTTAATAAGGGATTGCTAGAATGTGACAGGCCTTTGGTAGAGGATAATAATACCCA
. : . : . : . : . : . :
rJMFF039F08+ CAAGGAAGAGATTATTAGTATGCAATCTTCCTTCGTCTGGAGGATCCCAGATTTTTATTC
rJMFF035H05+ CAAGGAAGAGATTATTAGTATGCAATCTTCCTTCGTCTGGAGGATCCCAGATTTTTATTC
rJMFF004A19+ CAAGGAAGAGATTATTAGTATGCAATCTTCCTTCGTCTGGAGGATCCCAGATTTTTATTC
____________________________________________________________
consensus CAAGGAAGAGATTATTAGTATGCAATCTTCCTTCGTCTGGAGGATCCCAGATTTTTATTC
. : . : . : . : . : . :
rJMFF039F08+ AATTATTCTCTTGAAAGTTGATATTTCAGTACTTTGGTCATTTTGCACCATTGTATTATT
rJMFF035H05+ AATTATTCTCTTGAAAGTTGATATTTCAGTACTTTGGTCATTTTGCACCATTGTATTATT
rJMFF004A19+ AATTATTCTCTTGAAAGTTGATATTTCAGTACTTTGGTCATTTTGCACCATTGTATTATT
____________________________________________________________
consensus AATTATTCTCTTGAAAGTTGATATTTCAGTACTTTGGTCATTTTGCACCATTGTATTATT
. : . : . : . : . : . :
rJMFF039F08+ GTGGCATTTGGGAAAATCTTGTACTCTCTTTAGACTATGCTACTTCAATACC
rJMFF035H05+ GTGGCATTTGGGAAAATCTTGTACTCTCTTTAGACTATGCTACTTCAATACC
rJMFF004A19+ GTGGCATTTGGGAAAATCTTGTACTCTCTTTAGACTATGCTACTTCAATACCCGAGATCA
____________________________________________________________
consensus GTGGCATTTGGGAAAATCTTGTACTCTCTTTAGACTATGCTACTTCAATACCCGAGATCA