Contig 001021:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF002C12-                                                         TCTGAATGTTTAT
                      ____________________________________________________________
consensus                                                            TCTGAATGTTTAT
 
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rJMFF032H14-             TGGTGTACTGAACAATACAATATATGAAATGAAGGATAGCTAAAGCTACTGTTTTAT
JMFF032H14+                             TACAATATATGAAATGAAGGATAGCTAAAGCTACTGTTTTAT
rJMFF002C12-          TCATGGTGTACTGAACAATACAATATATGAAATGAAGGATAGCTAAAGCTACTGTTTTAT
                      ____________________________________________________________
consensus             TCATGGTGTACTGAACAATACAATATATGAAATGAAGGATAGCTAAAGCTACTGTTTTAT
 
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rJMFF032H14-          ACCAACTGCAGTGGTAGTTATAACAGAAATGAAGGAAGGAAATTACAAGAATGTCCTTAT
JMFF032H14+           ACCAACTGCAGTGGTAGTTATAACAGAAATGAAGGAAGGAAATTACAAGAATGTCCTTAT
rJMFF002C12-          ACCAACTGCAGTGGTAGTTATAACAGAAATGAAGGAAGGAAATTACAAGAATGTCCTTAT
                      ____________________________________________________________
consensus             ACCAACTGCAGTGGTAGTTATAACAGAAATGAAGGAAGGAAATTACAAGAATGTCCTTAT
 
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rJMFF032H14-          CTTCTAAGTGTATTTCATCATATTTGGATCCCAAAATATGCATGATTAAGGACTATGGTT
JMFF032H14+           CTTCTAAGTGTATTTCATCATATTTGGATCCCAAAATATGCATGATTAAGGACTATGGTT
JMFF002C12+               TAAGTGTATTTCATCATATTGGGATCCCAAAATATGCATGATTAAGGACTATGGTT
rJMFF002C12-          CTTCTAAGTGTATTTCATCATATTTGGATCCCAAAATATGCATGATTAAGGACTATGGTT
                      ____________________________________________________________
consensus             CTTCTAAGTGTATTTCATCATATTTGGATCCCAAAATATGCATGATTAAGGACTATGGTT
 
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rJMFF032H14-          TCAGGATCATCACCTGGTTGAAGCTTCTACAAAACCAATAGACACTGTTCGAAAGTCCAT
JMFF032H14+           TCAGGATCATCACCTGGTTGAAGCTTCTACAAAACCAATAGACACTGTTCGAAAGTCCAT
JMFF002C12+           TCAGGATCATCACCTGGTTGAAGCTTCTACAAAACCAATAGACACTGTTCGAAAGTCCAT
rJMFF002C12-          TCAGGATCATCACCTGGTTGAAGCTTCTACAAAACCAATAGACACTGTTCGAAAGTCCAT
                      ____________________________________________________________
consensus             TCAGGATCATCACCTGGTTGAAGCTTCTACAAAACCAATAGACACTGTTCGAAAGTCCAT
 
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rJMFF032H14-          GGCCTATCATGAATGATTCGATTGAGATCAGACTCAAGGTAGAAACGAATGAGAAAGCGT
JMFF032H14+           GGCCTATCATGAATGATTCGATTGAGATCAGACTCAAGGTAGAAACGAATGAGAAAGCGT
JMFF002C12+           GGCCTATCATGAATGATTCGATTGAGATCAGACTCAAGGTAGAAACGAATGAGAAAGCGT
rJMFF002C12-          GGCCTATCATGAATGATTCGATTGAGATCAGACTCAAGGTAGAAACGAATGAGAAAGCGT
                      ____________________________________________________________
consensus             GGCCTATCATGAATGATTCGATTGAGATCAGACTCAAGGTAGAAACGAATGAGAAAGCGT
 
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rJMFF032H14-          TGAGGTTAAAGCTGATGCATCGTAACACCGATGGCCGGTTGACATACTGCCGCCATTGTG
JMFF032H14+           TGAGGTTAAAGCTGATGCATCGTAACACCGATGGCCGGTTGACATACTGCCGCCATTGTG
JMFF002C12+           TGAGGTTAAAGCTGATGCATCGTAACACCGATGGCCGGTTGACATACTGCCGCCATTGTG
rJMFF002C12-          TGAGGTTAAAGCTGATGCATCGTAACACCGATGGCCGGTTGACATACTGCCGCCATTGTG
                      ____________________________________________________________
consensus             TGAGGTTAAAGCTGATGCATCGTAACACCGATGGCCGGTTGACATACTGCCGCCATTGTG
 
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rJMFF032H14-          TCTTGAAAAAACATAAATTTGACCGATTTGTTGGTAACTAATATGCCAACTACGTAGTAA
JMFF032H14+           TCTTGAAAAAACATAAATTTGACCGATTTGTTGGTAACTAATATGCCAACTACGTAGTAA
JMFF002C12+           TCTTGAAAAAACATAAATTTGACCGATTTGTTGGTAACTAATATGCCAACTACGTAGTAA
rJMFF002C12-          TCTTGAAAAAACATAAATTTGACCGATTTGTTGGTAACTAATATGCCAACTACGTAGTAA
                      ____________________________________________________________
consensus             TCTTGAAAAAACATAAATTTGACCGATTTGTTGGTAACTAATATGCCAACTACGTAGTAA
 
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rJMFF032H14-          CTGTTGTTCTCATCGTGTTCACTGATATGAACGTTGGATAATTGCACGGCCAAATCCTCA
JMFF032H14+           CTGTTGTTCTCATCGTGTTCACTGATATGAACGTTGGATAATTGCACGGCCAAATCCTCA
JMFF002C12+           CTGTTGTTCTCATCGTGTTCACTGATATGAACGTTGGATAATTGCACGGCCAAATCCTCA
rJMFF002C12-          CTGTTGTTCTCATCGTGTTCACTGATATGAACGTTGGATAATTGCACGGCCAAATCCTCA
                      ____________________________________________________________
consensus             CTGTTGTTCTCATCGTGTTCACTGATATGAACGTTGGATAATTGCACGGCCAAATCCTCA
 
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rJMFF032H14-          TTATCAACGTCGGCCAAAGTAAGGTTCGCACATGAGTTGGAAATATCGTCGGAAGCCATC
JMFF032H14+           TTATCAACGTCGGCCAAAGTAAGGTTCGCACATGAGTTGGAAATATCGTCGGAAGCCATC
JMFF002C12+           TTATCAACGTCGGCCAAAGTAAGGTTCGCACATGAGTTGGAAATATCGTCGGAAGCCATC
rJMFF002C12-          TTATCAACGTCGGCCAAAGTAAGGTTCGCACATGAGTTGGAAATATCGTCGGAAGCCATC
                      ____________________________________________________________
consensus             TTATCAACGTCGGCCAAAGTAAGGTTCGCACATGAGTTGGAAATATCGTCGGAAGCCATC
 
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rJMFF032H14-          GAGACCAACGGAATGGCAAAACCCTAGATACAGCACGGAGGAAGCTGCTCGCGAACAACC
JMFF032H14+           GAGACCAACGGAATGGCAAAACCCTAGATACAGCACGGAGGAAGCTGCTCGCGAACAACC
JMFF002C12+           GAGACCAACGGAATGGCAAAACCCTANATACAGCACGGAGGAAGCTGCTCGCGAACAACC
rJMFF002C12-          GAGACCAACGGAATGGCAAAACCCTAGATACAGCACGGAGGAAGCTGCTCGCGAACAACC
                      ____________________________________________________________
consensus             GAGACCAACGGAATGGCAAAACCCTAGATACAGCACGGAGGAAGCTGCTCGCGAACAACC