Contig 001021:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002C12Sequence476001021 (4)ref|XP_006494714.1|68.9PREDICTED: uncharacterized protein LOC102611758 [Citrus sinensis]613001021 (4)ref|XP_006494714.1|72.0PREDICTED: uncharacterized protein LOC102611758 [Citrus sinensis]
JMFF032H14Sequence582001021 (4)ref|XP_006494714.1|72.0PREDICTED: uncharacterized protein LOC102611758 [Citrus sinensis]607001021 (4)ref|XP_006494714.1|72.0PREDICTED: uncharacterized protein LOC102611758 [Citrus sinensis]

Alignment

This contig is upended


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rJMFF002C12- TCTGAATGTTTAT
                      ____________________________________________________________
consensus TCTGAATGTTTAT
 
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rJMFF032H14- TGGTGTACTGAACAATACAATATATGAAATGAAGGATAGCTAAAGCTACTGTTTTAT
JMFF032H14+ TACAATATATGAAATGAAGGATAGCTAAAGCTACTGTTTTAT
rJMFF002C12- TCATGGTGTACTGAACAATACAATATATGAAATGAAGGATAGCTAAAGCTACTGTTTTAT
                      ____________________________________________________________
consensus TCATGGTGTACTGAACAATACAATATATGAAATGAAGGATAGCTAAAGCTACTGTTTTAT
 
. : . : . : . : . : . :
rJMFF032H14- ACCAACTGCAGTGGTAGTTATAACAGAAATGAAGGAAGGAAATTACAAGAATGTCCTTAT
JMFF032H14+ ACCAACTGCAGTGGTAGTTATAACAGAAATGAAGGAAGGAAATTACAAGAATGTCCTTAT
rJMFF002C12- ACCAACTGCAGTGGTAGTTATAACAGAAATGAAGGAAGGAAATTACAAGAATGTCCTTAT
                      ____________________________________________________________
consensus ACCAACTGCAGTGGTAGTTATAACAGAAATGAAGGAAGGAAATTACAAGAATGTCCTTAT
 
. : . : . : . : . : . :
rJMFF032H14- CTTCTAAGTGTATTTCATCATATTTGGATCCCAAAATATGCATGATTAAGGACTATGGTT
JMFF032H14+ CTTCTAAGTGTATTTCATCATATTTGGATCCCAAAATATGCATGATTAAGGACTATGGTT
JMFF002C12+ TAAGTGTATTTCATCATATTGGGATCCCAAAATATGCATGATTAAGGACTATGGTT
rJMFF002C12- CTTCTAAGTGTATTTCATCATATTTGGATCCCAAAATATGCATGATTAAGGACTATGGTT
                      ____________________________________________________________
consensus CTTCTAAGTGTATTTCATCATATTTGGATCCCAAAATATGCATGATTAAGGACTATGGTT
 
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rJMFF032H14- TCAGGATCATCACCTGGTTGAAGCTTCTACAAAACCAATAGACACTGTTCGAAAGTCCAT
JMFF032H14+ TCAGGATCATCACCTGGTTGAAGCTTCTACAAAACCAATAGACACTGTTCGAAAGTCCAT
JMFF002C12+ TCAGGATCATCACCTGGTTGAAGCTTCTACAAAACCAATAGACACTGTTCGAAAGTCCAT
rJMFF002C12- TCAGGATCATCACCTGGTTGAAGCTTCTACAAAACCAATAGACACTGTTCGAAAGTCCAT
                      ____________________________________________________________
consensus TCAGGATCATCACCTGGTTGAAGCTTCTACAAAACCAATAGACACTGTTCGAAAGTCCAT
 
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rJMFF032H14- GGCCTATCATGAATGATTCGATTGAGATCAGACTCAAGGTAGAAACGAATGAGAAAGCGT
JMFF032H14+ GGCCTATCATGAATGATTCGATTGAGATCAGACTCAAGGTAGAAACGAATGAGAAAGCGT
JMFF002C12+ GGCCTATCATGAATGATTCGATTGAGATCAGACTCAAGGTAGAAACGAATGAGAAAGCGT
rJMFF002C12- GGCCTATCATGAATGATTCGATTGAGATCAGACTCAAGGTAGAAACGAATGAGAAAGCGT
                      ____________________________________________________________
consensus GGCCTATCATGAATGATTCGATTGAGATCAGACTCAAGGTAGAAACGAATGAGAAAGCGT
 
. : . : . : . : . : . :
rJMFF032H14- TGAGGTTAAAGCTGATGCATCGTAACACCGATGGCCGGTTGACATACTGCCGCCATTGTG
JMFF032H14+ TGAGGTTAAAGCTGATGCATCGTAACACCGATGGCCGGTTGACATACTGCCGCCATTGTG
JMFF002C12+ TGAGGTTAAAGCTGATGCATCGTAACACCGATGGCCGGTTGACATACTGCCGCCATTGTG
rJMFF002C12- TGAGGTTAAAGCTGATGCATCGTAACACCGATGGCCGGTTGACATACTGCCGCCATTGTG
                      ____________________________________________________________
consensus TGAGGTTAAAGCTGATGCATCGTAACACCGATGGCCGGTTGACATACTGCCGCCATTGTG
 
. : . : . : . : . : . :
rJMFF032H14- TCTTGAAAAAACATAAATTTGACCGATTTGTTGGTAACTAATATGCCAACTACGTAGTAA
JMFF032H14+ TCTTGAAAAAACATAAATTTGACCGATTTGTTGGTAACTAATATGCCAACTACGTAGTAA
JMFF002C12+ TCTTGAAAAAACATAAATTTGACCGATTTGTTGGTAACTAATATGCCAACTACGTAGTAA
rJMFF002C12- TCTTGAAAAAACATAAATTTGACCGATTTGTTGGTAACTAATATGCCAACTACGTAGTAA
                      ____________________________________________________________
consensus TCTTGAAAAAACATAAATTTGACCGATTTGTTGGTAACTAATATGCCAACTACGTAGTAA
 
. : . : . : . : . : . :
rJMFF032H14- CTGTTGTTCTCATCGTGTTCACTGATATGAACGTTGGATAATTGCACGGCCAAATCCTCA
JMFF032H14+ CTGTTGTTCTCATCGTGTTCACTGATATGAACGTTGGATAATTGCACGGCCAAATCCTCA
JMFF002C12+ CTGTTGTTCTCATCGTGTTCACTGATATGAACGTTGGATAATTGCACGGCCAAATCCTCA
rJMFF002C12- CTGTTGTTCTCATCGTGTTCACTGATATGAACGTTGGATAATTGCACGGCCAAATCCTCA
                      ____________________________________________________________
consensus CTGTTGTTCTCATCGTGTTCACTGATATGAACGTTGGATAATTGCACGGCCAAATCCTCA
 
. : . : . : . : . : . :
rJMFF032H14- TTATCAACGTCGGCCAAAGTAAGGTTCGCACATGAGTTGGAAATATCGTCGGAAGCCATC
JMFF032H14+ TTATCAACGTCGGCCAAAGTAAGGTTCGCACATGAGTTGGAAATATCGTCGGAAGCCATC
JMFF002C12+ TTATCAACGTCGGCCAAAGTAAGGTTCGCACATGAGTTGGAAATATCGTCGGAAGCCATC
rJMFF002C12- TTATCAACGTCGGCCAAAGTAAGGTTCGCACATGAGTTGGAAATATCGTCGGAAGCCATC
                      ____________________________________________________________
consensus TTATCAACGTCGGCCAAAGTAAGGTTCGCACATGAGTTGGAAATATCGTCGGAAGCCATC
 
. : . : . : . : . : . :
rJMFF032H14- GAGACCAACGGAATGGCAAAACCCTAGATACAGCACGGAGGAAGCTGCTCGCGAACAACC
JMFF032H14+ GAGACCAACGGAATGGCAAAACCCTAGATACAGCACGGAGGAAGCTGCTCGCGAACAACC
JMFF002C12+ GAGACCAACGGAATGGCAAAACCCTANATACAGCACGGAGGAAGCTGCTCGCGAACAACC
rJMFF002C12- GAGACCAACGGAATGGCAAAACCCTAGATACAGCACGGAGGAAGCTGCTCGCGAACAACC
                      ____________________________________________________________
consensus GAGACCAACGGAATGGCAAAACCCTAGATACAGCACGGAGGAAGCTGCTCGCGAACAACC