Contig 001020:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002A18Sequence514004535 (4)ref|XP_009783127.1|9e-60PREDICTED: uncharacterized protein LOC104231771 isoform X2 [Nicotiana sylvestri756001020 (4)ref|XP_009612138.1|1e-88PREDICTED: uncharacterized protein LOC104105510 isoform X2 [Nicotiana tomentosi
JMFF013I14Sequence110004535 (4)711001020 (4)ref|XP_009612130.1|3e-86PREDICTED: uncharacterized protein LOC104105510 isoform X1 [Nicotiana tomentosi
JMFF020N12Sequence541004535 (4)ref|XP_009783127.1|3e-67PREDICTED: uncharacterized protein LOC104231771 isoform X2 [Nicotiana sylvestri756001020 (4)ref|XP_009612138.1|2e-95PREDICTED: uncharacterized protein LOC104105510 isoform X2 [Nicotiana tomentosi
JMFF032M12Sequence527004535 (4)ref|XP_009783127.1|5e-68PREDICTED: uncharacterized protein LOC104231771 isoform X2 [Nicotiana sylvestri793001020 (4)ref|XP_009612130.1|3e-98PREDICTED: uncharacterized protein LOC104105510 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


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rJMFF032M12+                                             ATTCTGCAGAAGCAGTAGAGCTCAA
                      ____________________________________________________________
consensus                                                ATTCTGCAGAAGCAGTAGAGCTCAA
 
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rJMFF032M12+          TGCCCTCAATGGTGTGGGGAATTTTCNTAGTCCAAGGGAATTGGCTGAACTCAATG-AAA
rJMFF020N12+                      TGTGGGGAATTTTCNTAGTCCAAGGGAATTGGCTGAACTCAATG-AAA
rJMFF002A18+                                     TAGTCCAAGGGAATTGGCTGAACTCAATGAAAA
                      ____________________________________________________________
consensus             TGCCCTCAATGGTGTGGGGAATTTTCNTAGTCCAAGGGAATTGGCTGAACTCAATG-AAA
 
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rJMFF032M12+          GTTTCCTTGCAAAGCGCTGTAATCTTGGCTACAGAGCTGCCCGCATTATTAATCTTGCTC
rJMFF020N12+          GTTTCCTTGCAAAGCGCTGTAATCTTGGCTACAGAGCTGCCCGCATTATTAATCTTGCTC
rJMFF013I14+                TTGCAAAGCGCTGTAATCTTGGCTACAGAGCTGCCCGCATTATTAATCTTGCTC
rJMFF002A18+          GTTTCCTTGCAAAGCGCTGTAATCTTGGCTACAGAGCTGCCCGCATTATTAATCTTGCTC
                      ____________________________________________________________
consensus             GTTTCCTTGCAAAGCGCTGTAATCTTGGCTACAGAGCTGCCCGCATTATTAATCTTGCTC
 
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rJMFF032M12+          GTGGTGTAGTTGAAGGCAGGATTCCACTCAAAGAAATTGAAGAATGTTGCAGACAGCCAA
rJMFF020N12+          GTGGTGTAGTTGAAGGCAGGATTCCACTCAAAGAAATTGAAGAATGTTGCAGACAGCCAA
rJMFF013I14+          GTGGTGTAGTTGAAGGCAGGATTCCACTCAAAGAAATTGAAGAATGTTGCAGACAGCCAA
rJMFF002A18+          GTGGTGTAGTTGAAGGCAGGATTCCACTCAAAGAAATTGAAGAATGTTGCAGACAGCCAA
                      ____________________________________________________________
consensus             GTGGTGTAGTTGAAGGCAGGATTCCACTCAAAGAAATTGAAGAATGTTGCAGACAGCCAA
 
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rJMFF032M12+          ACTTATCGAACTATGATGAGTTGGCCAGGCAGCTGAAAGAAATAGATGGATTTGGGCCAT
rJMFF020N12+          ACTTATCGAACTATGATGAGTTGGCCAGGCAGCTGAAAGAAATAGATGGATTTGGGCCAT
rJMFF013I14+          ACTTATCGAACTATGATGAGTTGGCCAGGCAGCTGAAAGAAATAGATGGATTTGGGCCAT
rJMFF002A18+          ACTTATCGAACTATGATGAGTTGGCCAGGCAGCTGAAAGAAATAGATGGATTTGGGCCAT
                      ____________________________________________________________
consensus             ACTTATCGAACTATGATGAGTTGGCCAGGCAGCTGAAAGAAATAGATGGATTTGGGCCAT
 
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rJMFF032M12+          TTACTTGTGCAAATGTGCTAATGTGTTTGGGATATTACCATGTGATTCCTACAGATTCCG
rJMFF020N12+          TTACTTGTGCAAATGTGCTAATGTGTTTGGGATATTACCATGTGATTCCTACAGATTCCG
rJMFF013I14+          TTACTTGTGCAAATGTGCTAATGTGTTTGGGATATTACCATGTGATTCCTACAGATTCCG
rJMFF002A18+          TTACTTGTGCAAATGTGCTAATGTGTTTGGGATATTACCATGTGATTCCTACAGATTCCG
                      ____________________________________________________________
consensus             TTACTTGTGCAAATGTGCTAATGTGTTTGGGATATTACCATGTGATTCCTACAGATTCCG
 
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rJMFF032M12+          AGACAATCAGGCATCTAAAACAGGTTCATGCAAAATCCTCTTCCACTCTAACAGTTCAAA
rJMFF020N12+          AGACAATCAGGCATCTAAAACAGGTTCATGCAAAATCCTCTTCCACTCTAACAGTTCAAA
rJMFF013I14+          AGACAATCAGGCATCTAAAACAGGTTCATGCAAAATCCTCTTCCACTCTAACAGTTCAAA
rJMFF002A18+          AGACAATCAGGCATCTAAAACAGGTTCATGCAAAATCCTCTTCCACTCTAACAGTTCAAA
                      ____________________________________________________________
consensus             AGACAATCAGGCATCTAAAACAGGTTCATGCAAAATCCTCTTCCACTCTAACAGTTCAAA
 
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rJMFF032M12+          AGGATGTTGAAGCAATTTATGGGAAATATGCACCATTTCAATTCTTGGTATATTGGTCGG
rJMFF020N12+          AGGATGTTGAAGCAATTTATGGGAAATATGCACCATTTCAATTCTTGGTATATTGGTCGG
rJMFF013I14+          AGGATGTTGAAGCAATTTATGGGAAATATGCACCATTTCAATTCTTGGTATATTGGTCGG
rJMFF002A18+          AGGATGTTGAAGCAATTTATGGGAAATATGCACCATTTCAATTCTTGGTATATTGGTCGG
                      ____________________________________________________________
consensus             AGGATGTTGAAGCAATTTATGGGAAATATGCACCATTTCAATTCTTGGTATATTGGTCGG
 
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rJMFF032M12+          AGATATGGCACTTTTATGAGGAATGGTTTGGAAAATTAAGTGAAATGCCACAATCTGGTT
rJMFF020N12+          AGATATGGCACTTTTATGAGGAATGGTTTGGAAAATTAAGTGAAATGCCACAATCTGGTT
rJMFF013I14+          AGATATGGCACTTTTATGAGGAATGGTTTGGAAAATTAAGTGAAATGCCACAATCTGGTT
rJMFF002A18+          AGATATGGCACTTTTATGAGGAATGGTTTGGAAAATTAAGTGAAATGCCACAATCTGGTT
                      ____________________________________________________________
consensus             AGATATGGCACTTTTATGAGGAATGGTTTGGAAAATTAAGTGAAATGCCACAATCTGGTT
 
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rJMFF032M12+          ATAATCGTATTACTGCCTCGAATATGAGACCAAAAAGAAATGCCAAAAGCAAGAGGATCA
rJMFF020N12+          ATAATCGTATTACTGCCTCGAATATGAGACCAAAAAGAAATGCCAAAAGCAAGAGGATCA
rJMFF013I14+          ATAATCGTATTACTGCCTCGAATATGAGACCAAAAAGAAATGCCAAAAGCAAGAGGATCA
rJMFF002A18+          ATAATCGTATTACTGCCTCGAATATGAGACCAAAAAGAAATGCCAAAAGCAAGAGGATCA
                      ____________________________________________________________
consensus             ATAATCGTATTACTGCCTCGAATATGAGACCAAAAAGAAATGCCAAAAGCAAGAGGATCA
 
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rJMFF032M12+          AAACAAGCGCTTGAGGTAACAAGAAAAATGTTACATATTCATATCTGATAAAGCTTTCTG
rJMFF020N12+          AAACAAGCGCTTGAGGTAACAAGAAAAATGTTACATATTCATATCTGATAAAGCTTTCTG
rJMFF013I14+          AAACAAGCGCTTGAGGTAACAAGAAAAATGTTACATATTCATATCTGATAAAGCTTTCTG
rJMFF002A18+          AAACAAGCGCTTGAGGTAACAAGAAAAATGTTACATATTCATATCTGATAAAGCTTTCTG
                      ____________________________________________________________
consensus             AAACAAGCGCTTGAGGTAACAAGAAAAATGTTACATATTCATATCTGATAAAGCTTTCTG
 
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rJMFF032M12+          GATTGAGTGGCATGGCTATTTACAGTGTTTTCTTCATTTTGTGTAGACCATATTATTGCC
rJMFF020N12+          GATTGAGTGGCATGGCTATTTACAGTGTTTTCTTCATTTTGTGTAGACCATATTATTGCC
rJMFF013I14+          GATTGAGTGGCATGGCTATTTACAGTGTTTTCTTCATTTTGTGTAGACCATATTATTGCC
rJMFF002A18+          GATTGAGTGGCATGGCTATTTACAGTGTTTTCTTCATTTTGTGTAGACCATATTATTGCC
                      ____________________________________________________________
consensus             GATTGAGTGGCATGGCTATTTACAGTGTTTTCTTCATTTTGTGTAGACCATATTATTGCC
 
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rJMFF032M12+          AATCAAATGGAAGACATGGCTAAAATAGGATTAATTTTATAAACCATGTACTTTGCTTTA
rJMFF020N12+          AATCAAATGGAAGACATGGCTAAAATAGGATTAATTTTATAAACCATGTACTTTGCTTTA
rJMFF013I14+          AATCAAATGGAAGACATGGCTAAAATAGGATTAATTTTATAAACCATGTACTTTGCTTTA
rJMFF002A18+          AATCAAATGGAAGACATGGCTAAAATAGGATTAATTTTATAAACCATGTACTTTGCTTTA
                      ____________________________________________________________
consensus             AATCAAATGGAAGACATGGCTAAAATAGGATTAATTTTATAAACCATGTACTTTGCTTTA
 
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rJMFF032M12+          GTATTTGTCATCTATAAGTCAGTCAAGACAGCCATGAATTTTGTAGTCT           
rJMFF020N12+          GTATTTGTCATCTATAAGTCAGTCAAGACAGCCATGAATTTTGTAGTCT           
rJMFF013I14+          GTATTTGTCATCTATAAGTCAGTCAAGACAGCCATGAATTTTGTAGTCT           
rJMFF002A18+          GTATTTGTCATCTATAAGTCAGTCAAGACAGCCATGAATTTTGTAGTCTTGATAAAGAAA
                      ____________________________________________________________
consensus             GTATTTGTCATCTATAAGTCAGTCAAGACAGCCATGAATTTTGTAGTCTTGATAAAGAAA