Contig 001018:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001N15Sequence545008707 (2)dbj|BAI47574.1|1e-56zeta-carotene desaturase [Ipomoea sp. Kenyan]686001018 (3)ref|XP_006471845.1|3e-87PREDICTED: zeta-carotene desaturase, chloroplastic/chromoplastic-like, partial
JMFS046H07Sequence594001018 (3)gb|AHE41415.1|2e-121epsilon-carotene desaturase, partial [Lycium chinense]
JMSF046M05Sequence282001018 (3)ref|XP_006471845.1|1e-51PREDICTED: zeta-carotene desaturase, chloroplastic/chromoplastic-like, partial

Alignment

This contig is upended


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JMFS046H07-           TGGTTGGAGTGCCTGTAGTTACGGTGCAACTTANATACAATGGTTGGGTTACGGAATTGC
                      ____________________________________________________________
consensus             TGGTTGGAGTGCCTGTAGTTACGGTGCAACTTANATACAATGGTTGGGTTACGGAATTGC
 
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JMFS046H07-           AAGATTTGGAGCGTTCGAGGCAATTGAGGCGGGCAACGGGCTTGGATAATCTCCTATATA
                      ____________________________________________________________
consensus             AAGATTTGGAGCGTTCGAGGCAATTGAGGCGGGCAACGGGCTTGGATAATCTCCTATATA
 
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JMFS046H07-           CACCGGATGCAGATTTCTCTTGCTTCACAAATCTTGCACTGACTTCTCCCGAGGATTATT
rJMFF001N15+                                            TGCACTGACTTCTCCCGAGGATTATT
                      ____________________________________________________________
consensus             CACCGGATGCAGATTTCTCTTGCTTCACAAATCTTGCACTGACTTCTCCCGAGGATTATT
 
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JMFS046H07-           ACATCGAGGGTCAAGGCTCGTTGCTCCAATGTGTCCTTACGCCCGGTGATCCTTACATGC
rJMFF001N15+          ACATCGAGGGTCAAGGCTCGTTGCTCCAATGTGTCCTTACGCCCGGTGATCCTTACATGC
                      ____________________________________________________________
consensus             ACATCGAGGGTCAAGGCTCGTTGCTCCAATGTGTCCTTACGCCCGGTGATCCTTACATGC
 
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JMFS046H07-           CCCTACCAAACAATGAAATTATAAGAAGAGTATCCGAACAGGTTTTGACTCTTTTCCCAT
rJMSF046M05+             TACCAAACAATGAAATTATAAGAAGAGTATCCGAACAGGTTTTGACTCTTTTNCCNT
rJMFF001N15+          CCCTACCAAACAATGAAATTATAAGAAGAGTATCCGAACAGGTTTTGACTCTTTTCCCAT
                      ____________________________________________________________
consensus             CCCTACCAAACAATGAAATTATAAGAAGAGTATCCGAACAGGTTTTGACTCTTTTCCCAT
 
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JMFS046H07-           CCTCCCAAGGCTTGGAAGTCACATGGTCATCGGTTGTCAAAATCGGGCAATCTTTATACC
rJMSF046M05+          CCTCNCAAGGCTTGGAAGTCACATGGTCATCGGTTGTCAAAATCGGGCAATCTTTATACC
rJMFF001N15+          CCTCCCAAGGCTTGGAAGTCACATGGTCATCGGTTGTCAAAATCGGGCAATCTTTATACC
                      ____________________________________________________________
consensus             CCTCCCAAGGCTTGGAAGTCACATGGTCATCGGTTGTCAAAATCGGGCAATCTTTATACC
 
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JMFS046H07-           GAGAAGGGCCCGGCNAAGATCCATTCCGACCTGATCAGAAAACGCCAGTGAAGAATTTCT
rJMSF046M05+          GAGAAGGGCCCGGCAAAGATCCATTCCGACCTGATCAGAAAACGCCAGTGAAGAATTTCT
rJMFF001N15+          GAGAAGGGCCCGGCAAAGATCCATTCCGACCTGATCAGAAAACGCCAGTGAAGAATTTCT
                      ____________________________________________________________
consensus             GAGAAGGGCCCGGCAAAGATCCATTCCGACCTGATCAGAAAACGCCAGTGAAGAATTTCT
 
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JMFS046H07-           TCCTCGCGGGGTCTTATACAAAACAGGATTACATAGACAGCATGGAAGGAGCAACGCTTT
rJMSF046M05+          TCCTCGCGGGGTGTTATACAANACAGGATNACATAGNCAGCATGGAAGGAGCAACGCTTT
rJMFF001N15+          TCCTCGCGGGGTCTTATACAAAACAGGATTACATAGACAGCATGGAAGGAGCAACGCTTT
                      ____________________________________________________________
consensus             TCCTCGCGGGGTCTTATACAAAACAGGATTACATAGACAGCATGGAAGGAGCAACGCTTT
 
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JMFS046H07-           CGGGCAGGCAAGCGTCGGCCTATATATGCAGTGCCGGAGAAGAGCTCGTGACACTGCGAA
rJMSF046M05+          CGGGCAGGCAAGCGTCGGCCTATATATGCAGTGCCGGAGAAGAGC               
rJMFF001N15+          CGGGCAGGCAAGCGTCGGCCTATATATGCAGTGCCGGAGAAGAGCTCGTGACACTGCGAA
                      ____________________________________________________________
consensus             CGGGCAGGCAAGCGTCGGCCTATATATGCAGTGCCGGAGAAGAGCTCGTGACACTGCGAA
 
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JMFS046H07-           AACAGCTCGTCGCCGCTGCTGAATCGTCGAATATGCCCGATGCCGCCACTGCTG      
rJMFF001N15+          AACAGCTCGTCGCCGCTGCTGAATCGTCGAATATGCCCGATGCCGCCACTGCTGCTGTAT
                      ____________________________________________________________
consensus             AACAGCTCGTCGCCGCTGCTGAATCGTCGAATATGCCCGATGCCGCCACTGCTGCTGTAT
 
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rJMFF001N15+          CTGATGAGCTAAGTCTTGTCTGATCCACCTAGCCATTGCTCCAAGCAATGCAGAGAAAAT
                      ____________________________________________________________
consensus             CTGATGAGCTAAGTCTTGTCTGATCCACCTAGCCATTGCTCCAAGCAATGCAGAGAAAAT
 
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rJMFF001N15+          ATGCCACCCTGATCAACATTTCTGGGAAGAAATTAAAGCACCTCACTAGTTCTTCTCTTC
                      ____________________________________________________________
consensus             ATGCCACCCTGATCAACATTTCTGGGAAGAAATTAAAGCACCTCACTAGTTCTTCTCTTC
 
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rJMFF001N15+          TCTTTTCCTTTTGTGGCTAGAAGGTGAACACAAAATGGATATACATATGCTCATTGTAAA
                      ____________________________________________________________
consensus             TCTTTTCCTTTTGTGGCTAGAAGGTGAACACAAAATGGATATACATATGCTCATTGTAAA
 
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rJMFF001N15+          TTTAGTATACTTACAAAAGTTTGTCCGCATGGGTTTAGTTCAATGGTGCAGTAATCAATA
                      ____________________________________________________________
consensus             TTTAGTATACTTACAAAAGTTTGTCCGCATGGGTTTAGTTCAATGGTGCAGTAATCAATA