Contig 001010:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN044M08+                                                     ATGTATGGTGCGTTCTTG
rJMSF052I15-             TCAATACCCGAACCATACAATAAGCAAGAAACCCTGGACATGTATGGTGCGTTCTTG
                      ____________________________________________________________
consensus                TCAATACCCGAACCATACAATAAGCAAGAAACCCTGGACATGTATGGTGCGTTCTTG
 
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JMFN044M08+           ACTCCATC-TTAAGCTCAAATCAATGTTCAAGATAAACCCACACCAAAAATTATAAAAAT
rJMSF052I15-          ACTCCATCTTTAAGCTCAAATCAATGTTCAAGATAAACCCACACCAAAAATTATAAAAAT
                      ____________________________________________________________
consensus             ACTCCATCTTTAAGCTCAAATCAATGTTCAAGATAAACCCACACCAAAAATTATAAAAAT
 
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JMFN044M08+           AAAACTAAAATTGAATTTCCCAAGAAAAATTTGCTTCCAAAGAAAAAAAAATAAAAAGAA
rJMSF052I15-          AAAACTAAAATTGAATTTCCCAAGAAAAATTTGCTTCCAAAG-AAAAAAAATAAAAAGAA
                      ____________________________________________________________
consensus             AAAACTAAAATTGAATTTCCCAAGAAAAATTTGCTTCCAAAGAAAAAAAAATAAAAAGAA
 
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JMFN044M08+           AAAAAGCAAGCATAAATGGCATTGAGTGAGAGAGGCAGGCTTCTGGCTCTTCATTCATGG
rJMSF052I15-          AAAAAGCAAGCATAAATGGCATTGAGTGAGAGAGGCAGGCTTCTGGCTCTTCATTCATGG
                      ____________________________________________________________
consensus             AAAAAGCAAGCATAAATGGCATTGAGTGAGAGAGGCAGGCTTCTGGCTCTTCATTCATGG
 
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JMFN044M08+           AGCATAGCTAGCTAGCATTCATACTTCCCAACTAACCCAAAATTAACTCTCTTTGCCTCA
rJMSF052I15-          AGCATAGCTAGCTAGCATTCGTACTTCCCAACTAACCCAAAATTAACTCTCTTTGCCTCA
                      ____________________________________________________________
consensus             AGCATAGCTAGCTAGCATTCGTACTTCCCAACTAACCCAAAATTAACTCTCTTTGCCTCA
 
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JMFN044M08+           TTCAATTCAAGAGCAATGTAAACTTCAATTCTCCTTCTCAACTGTACCATATTTAAAGAT
rJMSF052I15-          TTCAATTCAAGAGCAATGTAAACTTCAATTCTCCTTCTCAACTGTACCATATTTAAAGAT
                      ____________________________________________________________
consensus             TTCAATTCAAGAGCAATGTAAACTTCAATTCTCCTTCTCAACTGTACCATATTTAAAGAT
 
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JMFN044M08+           GGCTTTGCTCATGCTTTGGTTCAGGCTTTGGCTCGGGTTCGGGTTTAGTGAATTCCACTA
rJMSF052I15-          GGCTTTGCTCATGCTTTGGTTCAGGCTTTGGCTCGGGTTCGGGTTTAGTGAATTCCACTA
                      ____________________________________________________________
consensus             GGCTTTGCTCATGCTTTGGTTCAGGCTTTGGCTCGGGTTCGGGTTTAGTGAATTCCACTA
 
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JMFN044M08+           TTACGACGCGATCTAACATTGGGTCATCAATCCCGAGGAACAGTGGGGCTGATGACATAA
rJMSF052I15-          TTACGACGCGATCTAACATTGGGTCATCAATCCCGAGGAACAGTGGGGCTGATGACATAA
JMSF052I15+                             TTGGGTCATCAATCCCGAGGAACAGTGGGGCTGATGACATAA
                      ____________________________________________________________
consensus             TTACGACGCGATCTAACATTGGGTCATCAATCCCGAGGAACAGTGGGGCTGATGACATAA
 
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JMFN044M08+           TGTTAGAGGCGTGGTAACAGTACAATTTTCTCTTGAATTGAAGGTGGGTTGTTGGAGGTA
rJMSF052I15-          TGTTAGAGGCGTGGTAACAGTACAATTTTCTCTTGAATTGAAGGTGGGTTGTTGGAGGTA
JMSF052I15+           TGTTAGAGGCGTGGTAACAGTACAATTTTCTCTTGAATTGAAGGTGGGTTGTTGGAGGTA
                      ____________________________________________________________
consensus             TGTTAGAGGCGTGGTAACAGTACAATTTTCTCTTGAATTGAAGGTGGGTTGTTGGAGGTA
 
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JMFN044M08+           TCAGATAAGGTTTAATGATTCATACTGACTGAGATGGATGCCCCAGCAAGCAGTAAAGGG
rJMSF052I15-          TCAGATAAGGTTTAATGATTCATACTGACTGAGATGGATGCCCCAGCAAGCAGTAAAGGG
JMSF052I15+           TCAGATAAGGTTTAATGATTCATACTGACTGAGATGGATGCCCCAGCAAGCAGTAAAGGG
                      ____________________________________________________________
consensus             TCAGATAAGGTTTAATGATTCATACTGACTGAGATGGATGCCCCAGCAAGCAGTAAAGGG
 
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JMFN044M08+           AGTAAAATTGGGTTTGAAACAAAGAA                                  
rJMSF052I15-          AGTAAAATTGGGTTTGAAACAAAGAAACGAATGGTTTTAATGATAAAGAAACTATTTTTT
JMSF052I15+           AGTAAAATTGGGTTTGAAACAAAGAAACGAATGGTTTTAATGATAAAGAAACTATTTTTT
                      ____________________________________________________________
consensus             AGTAAAATTGGGTTTGAAACAAAGAAACGAATGGTTTTAATGATAAAGAAACTATTTTTT
 
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rJMSF052I15-          TTTTAGGGTTTTGATTTTTGAATGGNGGGAATTCAANAANCGGAGGTGGGGACGGCGGAN
JMSF052I15+           TTTTAGGGTTTTGATTTTTGAATGGTGGGAATTCAAGAAGCGGAGGTGGGGACGGCGGAG
                      ____________________________________________________________
consensus             TTTTAGGGTTTTGATTTTTGAATGGTGGGAATTCAAGAAGCGGAGGTGGGGACGGCGGAG
 
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rJMSF052I15-          CAGTTCAAGGCGGATTTAATCTGGNGGACGGTGTTTCCGATAAGGCTGTTCACTGTGGCG
JMSF052I15+           CAGTTCAAGGCGGATTTAATCTGGTGGACGGTGTTTCCGATAAGGCTGTTCACTGTGGCG
                      ____________________________________________________________
consensus             CAGTTCAAGGCGGATTTAATCTGGTGGACGGTGTTTCCGATAAGGCTGTTCACTGTGGCG
 
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rJMSF052I15-          ACGGATTCCGGGCTCATTTTCGCCGACGGCAAGCTACTCACCANAATCTGAAACACGACG
JMSF052I15+           ACGGATTCCGGGCTCATTTTCGCCGACGGCAAGCTACTCACCAGAATCTGAAACACGACG
                      ____________________________________________________________
consensus             ACGGATTCCGGGCTCATTTTCGCCGACGGCAAGCTACTCACCAGAATCTGAAACACGACG
 
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rJMSF052I15-          GNGATGAGGGAACCCGCCTTCCCCACCACCTG                            
JMSF052I15+           GTGATGAGGG-ACCCGCCTTCCCCACCACCTGCTGCTGATGTAGATGTACTGCTAGCTGG
                      ____________________________________________________________
consensus             GTGATGAGGGAACCCGCCTTCCCCACCACCTGCTGCTGATGTAGATGTACTGCTAGCTGG
 
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JMSF052I15+           ATTGCTTGTACTTGATGATGCCTGGTCAATATTTATCTTAGTACTATTACCTCGGTCCGA
                      ____________________________________________________________
consensus             ATTGCTTGTACTTGATGATGCCTGGTCAATATTTATCTTAGTACTATTACCTCGGTCCGA
 
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JMSF052I15+           CCGGCCGTCCGGCGAGATAGTGAACCCCGACGGGAGGAGCGGGATGTAGGTGGGGTCCTC
                      ____________________________________________________________
consensus             CCGGCCGTCCGGCGAGATAGTGAACCCCGACGGGAGGAGCGGGATGTAGGTGGGGTCCTC
 
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JMSF052I15+           GCCGCTCATCGCCATGTTGATCGCCGGCAAGTCCACCGGACTGTACACCACTAGGCAGCC
                      ____________________________________________________________
consensus             GCCGCTCATCGCCATGTTGATCGCCGGCAAGTCCACCGGACTGTACACCACTAGGCAGCC