Contig 001005:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN029D03Sequence615001005 (3)emb|CDO97329.1|8e-97unnamed protein product [Coffea canephora]
JMSF051K16Sequence711001005 (3)ref|XP_009624553.1|2e-106PREDICTED: uncharacterized protein At3g49720-like [Nicotiana tomentosiformis]775001005 (3)ref|XP_009624553.1|4e-126PREDICTED: uncharacterized protein At3g49720-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF051K16- TTATCAAA
                      ____________________________________________________________
consensus TTATCAAA
 
. : . : . : . : . : . :
rJMSF051K16- AGAACAATCTATGCAGCAAACCAATACCATCTTAAACAGCAGATCTAGCTTTTGCAGAAC
                      ____________________________________________________________
consensus AGAACAATCTATGCAGCAAACCAATACCATCTTAAACAGCAGATCTAGCTTTTGCAGAAC
 
. : . : . : . : . : . :
rJMSF051K16- TGGAGAGACTGTAATTTCGTCAAAATAATTTAACAGGCTGTGGCCGGCCTGTGGGCGATA
                      ____________________________________________________________
consensus TGGAGAGACTGTAATTTCGTCAAAATAATTTAACAGGCTGTGGCCGGCCTGTGGGCGATA
 
. : . : . : . : . : . :
rJMSF051K16- ATGCTTCCTCGCTTGCTAAGGCATCGTTAGTGGAGTGGCTTCAGGTGGAAAACTTGGCAG
                      ____________________________________________________________
consensus ATGCTTCCTCGCTTGCTAAGGCATCGTTAGTGGAGTGGCTTCAGGTGGAAAACTTGGCAG
 
. : . : . : . : . : . :
rJMSF051K16- GCTGGCTTGTAAGATCTTTTGGCGGCCGCTTGTTCAAACTTCTTTGTTGCAGCTTCGTTC
                      ____________________________________________________________
consensus GCTGGCTTGTAAGATCTTTTGGCGGCCGCTTGTTCAAACTTCTTTGTTGCAGCTTCGTTC
 
. : . : . : . : . : . :
rJMSF051K16- TCTTCTAAGCTCGTTTGAACGAAGAACCTTATCCACCACGATGAGCTTCTCAATTTGGCA
                      ____________________________________________________________
consensus TCTTCTAAGCTCGTTTGAACGAAGAACCTTATCCACCACGATGAGCTTCTCAATTTGGCA
 
. : . : . : . : . : . :
rJMSF051K16- GGGCGCCCAAATTTAGACATCTCTGGCGCTTTAGCTCTTTGCTGACCGGGATAACCGGAT
JMFN029D03+ CCGGAT
JMSF051K16+ AAATTTAGACATCTCTGGCGCTTTAGCTCTTTGCTGACCGGGATAACCGGAT
                      ____________________________________________________________
consensus GGGCGCCCAAATTTAGACATCTCTGGCGCTTTAGCTCTTTGCTGACCGGGATAACCGGAT
 
. : . : . : . : . : . :
rJMSF051K16- AATATGACTAAACCATCAGCAGCCACTCTAGCCAATTGTGGAAGAGTCTTGTTAAGGTAT
JMFN029D03+ AATATGACTAAACCATCAGCAGCCACTCTAGCCAATTGTGGAAGAGTCTTGTTAAGGTAT
JMSF051K16+ AATATGACTAAACCATCAGCAGCCACTCTAGCCAATTGTGGAAGAGTCTTGTTAAGGTAT
                      ____________________________________________________________
consensus AATATGACTAAACCATCAGCAGCCACTCTAGCCAATTGTGGAAGAGTCTTGTTAAGGTAT
 
. : . : . : . : . : . :
rJMSF051K16- CTCGGGGACAAGTAATCCACGGCATCTGACACCACGACAAGGGAGAATGACTTGGCACGG
JMFN029D03+ CTCGGGGACAAGTAATCCACGGCATCTGACACCACGACAAGGGAGAATGACTTGGCACGG
JMSF051K16+ CTCGGGGACAAGTAATCCACGGCATCTGACACCACGACAAGGGAGAATGACTTGGCACGG
                      ____________________________________________________________
consensus CTCGGGGACAAGTAATCCACGGCATCTGACACCACGACAAGGGAGAATGACTTGGCACGG
 
. : . : . : . : . : . :
rJMSF051K16- TAAGGAAGAGGAAACTTGATATCAGCCACACGCACTATGCCTTTCCGTACAAGACTCTTG
JMFN029D03+ TAAGGAAGAGGAAACTTGATATCAGCCACACGCACTATGCCTTTCCGTACAAGACTCTTG
JMSF051K16+ TAAGGAAGAGGAAACTTGATATCAGCCACACGCACTATGCCTTTCCGTACAAGACTCTTG
                      ____________________________________________________________
consensus TAAGGAAGAGGAAACTTGATATCAGCCACACGCACTATGCCTTTCCGTACAAGACTCTTG
 
. : . : . : . : . : . :
rJMSF051K16- CAGTTGGCATCGGCCTCATCTAAGTCGTATGGTTCAATTCCCCACGCTTCAGTATCCTCT
JMFN029D03+ CAGTTGGCATCGGCCTCATCTAAGTCGTATGGTTCAATTCCCCACGCTTCAGTATCCTCT
JMSF051K16+ CAGTTGGCATCGGCCTCATCTAAGTCGTATGGTTCAATTCCCCACGCTTCAGTATCCTCT
                      ____________________________________________________________
consensus CAGTTGGCATCGGCCTCATCTAAGTCGTATGGTTCAATTCCCCACGCTTCAGTATCCTCT
 
. : . : . : . : . : . :
rJMSF051K16- TCTTTCAACAATGTGGACACTACCGAGCAGGTGTCGGGGCCCACATGCAATATTTTGTGC
JMFN029D03+ TCTTTCAACAATGTGGACACTACCGAGCAGGTGTCGGGGCCCACATGCAATATTTTGTGC
JMSF051K16+ TCTTTCAACAATGTGGACACTACCGAGCAGGTGTCGGGGCCCACATGCAATATTTTGTGC
                      ____________________________________________________________
consensus TCTTTCAACAATGTGGACACTACCGAGCAGGTGTCGGGGCCCACATGCAATATTTTGTGC
 
. : . : . : . : . : . :
rJMSF051K16- ATGCTATCACCATATGCTTTTTTCAGTACAGGCAATGCATTTTGTAGCTCTAATGTACAT
JMFN029D03+ ATGCTATCACCATATGCTTTTTTCAGTACAGGCAATGCATTTTGTAGCTCTAATGTACAT
JMSF051K16+ ATGCTATCACCATATGCTTTTTTCAGTACAGGCAATGCATTTTGTAGCTCTAATGTACAT
                      ____________________________________________________________
consensus ATGCTATCACCATATGCTTTTTTCAGTACAGGCAATGCATTTTGTAGCTCTAATGTACAT
 
. : . : . : . : . : . :
rJMSF051K16- GAAACACCGCCTTCGAGTCTGTTTATACGCTTCTAATCCAGCTCTTC
JMFN029D03+ GAAACACCGCCTTCGAGTCTG-TTATACGCTTCTAATCCAGCTCTTCCACCTGATCCACT
JMSF051K16+ GAAACACCGCCTTCGAGTCTG-TTATACGCTTCTAATCCAGCTCTTCCACCTGATCCACT
                      ____________________________________________________________
consensus GAAACACCGCCTTCGAGTCTG-TTATACGCTTCTAATCCAGCTCTTCCACCTGATCCACT
 
. : . : . : . : . : . :
JMFN029D03+ GTGTAGATAGCCAATAATCAGCAATGCACCCACAACCACAAGCCCTAGAGACAAAAAAGG
JMSF051K16+ GTGTAGATAGCCAATAATCAGCAATGCACCCACAACCACAAGCCCTAGAGACAAAAAAGG
                      ____________________________________________________________
consensus GTGTAGATAGCCAATAATCAGCAATGCACCCACAACCACAAGCCCTAGAGACAAAAAAGG
 
. : . : . : . : . : . :
JMFN029D03+ AGAGGGGCGTGATTTGGGATGCAGGGAGCCTACAAATGGAAGGCTCCCAGCATCCATCAG
JMSF051K16+ AGAGGGGCGTGATTTGGGATGCAGGGAGCCTACAAATGGAAGGCTCCCAGCATCCATCAG
                      ____________________________________________________________
consensus AGAGGGGCGTGATTTGGGATGCAGGGAGCCTACAAATGGAAGGCTCCCAGCATCCATCAG
 
. : . : . : . : . : . :
JMFN029D03+ ACGGCGAGATGTATTTGGCCTTCTCGACATTGTAATGGAGTTGCAATTAGCAAGCACGGC
JMSF051K16+ ACGGCGAGATGTATTTGGCCTTCTCGACATTGTAATGGAGTTGCAATTAGCAAGCACGGC
                      ____________________________________________________________
consensus ACGGCGAGATGTATTTGGCCTTCTCGACATTGTAATGGAGTTGCAATTAGCAAGCACGGC
 
. : . : . : . : . : . :
JMFN029D03+ GTGGTACTGA
JMSF051K16+ GTGGTACTGAGAGGGAGATCTGTTGAGGTAGAGATGGAATGGAGGTGGGATCTGGATCCC
                      ____________________________________________________________
consensus GTGGTACTGAGAGGGAGATCTGTTGAGGTAGAGATGGAATGGAGGTGGGATCTGGATCCC