Contig 001005:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF051K16-                                                              TTATCAAA
                      ____________________________________________________________
consensus                                                                 TTATCAAA
 
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rJMSF051K16-          AGAACAATCTATGCAGCAAACCAATACCATCTTAAACAGCAGATCTAGCTTTTGCAGAAC
                      ____________________________________________________________
consensus             AGAACAATCTATGCAGCAAACCAATACCATCTTAAACAGCAGATCTAGCTTTTGCAGAAC
 
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rJMSF051K16-          TGGAGAGACTGTAATTTCGTCAAAATAATTTAACAGGCTGTGGCCGGCCTGTGGGCGATA
                      ____________________________________________________________
consensus             TGGAGAGACTGTAATTTCGTCAAAATAATTTAACAGGCTGTGGCCGGCCTGTGGGCGATA
 
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rJMSF051K16-          ATGCTTCCTCGCTTGCTAAGGCATCGTTAGTGGAGTGGCTTCAGGTGGAAAACTTGGCAG
                      ____________________________________________________________
consensus             ATGCTTCCTCGCTTGCTAAGGCATCGTTAGTGGAGTGGCTTCAGGTGGAAAACTTGGCAG
 
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rJMSF051K16-          GCTGGCTTGTAAGATCTTTTGGCGGCCGCTTGTTCAAACTTCTTTGTTGCAGCTTCGTTC
                      ____________________________________________________________
consensus             GCTGGCTTGTAAGATCTTTTGGCGGCCGCTTGTTCAAACTTCTTTGTTGCAGCTTCGTTC
 
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rJMSF051K16-          TCTTCTAAGCTCGTTTGAACGAAGAACCTTATCCACCACGATGAGCTTCTCAATTTGGCA
                      ____________________________________________________________
consensus             TCTTCTAAGCTCGTTTGAACGAAGAACCTTATCCACCACGATGAGCTTCTCAATTTGGCA
 
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rJMSF051K16-          GGGCGCCCAAATTTAGACATCTCTGGCGCTTTAGCTCTTTGCTGACCGGGATAACCGGAT
JMFN029D03+                                                                 CCGGAT
JMSF051K16+                   AAATTTAGACATCTCTGGCGCTTTAGCTCTTTGCTGACCGGGATAACCGGAT
                      ____________________________________________________________
consensus             GGGCGCCCAAATTTAGACATCTCTGGCGCTTTAGCTCTTTGCTGACCGGGATAACCGGAT
 
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rJMSF051K16-          AATATGACTAAACCATCAGCAGCCACTCTAGCCAATTGTGGAAGAGTCTTGTTAAGGTAT
JMFN029D03+           AATATGACTAAACCATCAGCAGCCACTCTAGCCAATTGTGGAAGAGTCTTGTTAAGGTAT
JMSF051K16+           AATATGACTAAACCATCAGCAGCCACTCTAGCCAATTGTGGAAGAGTCTTGTTAAGGTAT
                      ____________________________________________________________
consensus             AATATGACTAAACCATCAGCAGCCACTCTAGCCAATTGTGGAAGAGTCTTGTTAAGGTAT
 
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rJMSF051K16-          CTCGGGGACAAGTAATCCACGGCATCTGACACCACGACAAGGGAGAATGACTTGGCACGG
JMFN029D03+           CTCGGGGACAAGTAATCCACGGCATCTGACACCACGACAAGGGAGAATGACTTGGCACGG
JMSF051K16+           CTCGGGGACAAGTAATCCACGGCATCTGACACCACGACAAGGGAGAATGACTTGGCACGG
                      ____________________________________________________________
consensus             CTCGGGGACAAGTAATCCACGGCATCTGACACCACGACAAGGGAGAATGACTTGGCACGG
 
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rJMSF051K16-          TAAGGAAGAGGAAACTTGATATCAGCCACACGCACTATGCCTTTCCGTACAAGACTCTTG
JMFN029D03+           TAAGGAAGAGGAAACTTGATATCAGCCACACGCACTATGCCTTTCCGTACAAGACTCTTG
JMSF051K16+           TAAGGAAGAGGAAACTTGATATCAGCCACACGCACTATGCCTTTCCGTACAAGACTCTTG
                      ____________________________________________________________
consensus             TAAGGAAGAGGAAACTTGATATCAGCCACACGCACTATGCCTTTCCGTACAAGACTCTTG
 
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rJMSF051K16-          CAGTTGGCATCGGCCTCATCTAAGTCGTATGGTTCAATTCCCCACGCTTCAGTATCCTCT
JMFN029D03+           CAGTTGGCATCGGCCTCATCTAAGTCGTATGGTTCAATTCCCCACGCTTCAGTATCCTCT
JMSF051K16+           CAGTTGGCATCGGCCTCATCTAAGTCGTATGGTTCAATTCCCCACGCTTCAGTATCCTCT
                      ____________________________________________________________
consensus             CAGTTGGCATCGGCCTCATCTAAGTCGTATGGTTCAATTCCCCACGCTTCAGTATCCTCT
 
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rJMSF051K16-          TCTTTCAACAATGTGGACACTACCGAGCAGGTGTCGGGGCCCACATGCAATATTTTGTGC
JMFN029D03+           TCTTTCAACAATGTGGACACTACCGAGCAGGTGTCGGGGCCCACATGCAATATTTTGTGC
JMSF051K16+           TCTTTCAACAATGTGGACACTACCGAGCAGGTGTCGGGGCCCACATGCAATATTTTGTGC
                      ____________________________________________________________
consensus             TCTTTCAACAATGTGGACACTACCGAGCAGGTGTCGGGGCCCACATGCAATATTTTGTGC
 
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rJMSF051K16-          ATGCTATCACCATATGCTTTTTTCAGTACAGGCAATGCATTTTGTAGCTCTAATGTACAT
JMFN029D03+           ATGCTATCACCATATGCTTTTTTCAGTACAGGCAATGCATTTTGTAGCTCTAATGTACAT
JMSF051K16+           ATGCTATCACCATATGCTTTTTTCAGTACAGGCAATGCATTTTGTAGCTCTAATGTACAT
                      ____________________________________________________________
consensus             ATGCTATCACCATATGCTTTTTTCAGTACAGGCAATGCATTTTGTAGCTCTAATGTACAT
 
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rJMSF051K16-          GAAACACCGCCTTCGAGTCTGTTTATACGCTTCTAATCCAGCTCTTC             
JMFN029D03+           GAAACACCGCCTTCGAGTCTG-TTATACGCTTCTAATCCAGCTCTTCCACCTGATCCACT
JMSF051K16+           GAAACACCGCCTTCGAGTCTG-TTATACGCTTCTAATCCAGCTCTTCCACCTGATCCACT
                      ____________________________________________________________
consensus             GAAACACCGCCTTCGAGTCTG-TTATACGCTTCTAATCCAGCTCTTCCACCTGATCCACT
 
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JMFN029D03+           GTGTAGATAGCCAATAATCAGCAATGCACCCACAACCACAAGCCCTAGAGACAAAAAAGG
JMSF051K16+           GTGTAGATAGCCAATAATCAGCAATGCACCCACAACCACAAGCCCTAGAGACAAAAAAGG
                      ____________________________________________________________
consensus             GTGTAGATAGCCAATAATCAGCAATGCACCCACAACCACAAGCCCTAGAGACAAAAAAGG
 
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JMFN029D03+           AGAGGGGCGTGATTTGGGATGCAGGGAGCCTACAAATGGAAGGCTCCCAGCATCCATCAG
JMSF051K16+           AGAGGGGCGTGATTTGGGATGCAGGGAGCCTACAAATGGAAGGCTCCCAGCATCCATCAG
                      ____________________________________________________________
consensus             AGAGGGGCGTGATTTGGGATGCAGGGAGCCTACAAATGGAAGGCTCCCAGCATCCATCAG
 
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JMFN029D03+           ACGGCGAGATGTATTTGGCCTTCTCGACATTGTAATGGAGTTGCAATTAGCAAGCACGGC
JMSF051K16+           ACGGCGAGATGTATTTGGCCTTCTCGACATTGTAATGGAGTTGCAATTAGCAAGCACGGC
                      ____________________________________________________________
consensus             ACGGCGAGATGTATTTGGCCTTCTCGACATTGTAATGGAGTTGCAATTAGCAAGCACGGC
 
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JMFN029D03+           GTGGTACTGA                                                  
JMSF051K16+           GTGGTACTGAGAGGGAGATCTGTTGAGGTAGAGATGGAATGGAGGTGGGATCTGGATCCC
                      ____________________________________________________________
consensus             GTGGTACTGAGAGGGAGATCTGTTGAGGTAGAGATGGAATGGAGGTGGGATCTGGATCCC