| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS057G02 | Sequence | 622 | 001001 (6) | ref|XP_006345940.1| | 1e-83 | PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Solanum tuberosum] | |||||
| JMFS111D03 | Sequence | 638 | 001001 (6) | ref|XP_010321375.1| | 3e-89 | PREDICTED: LOW QUALITY PROTEIN: 2-oxoglutarate dehydrogenase, mitochondrial [So | |||||
| JMFS122D11 | Sequence | 561 | 001001 (6) | ref|XP_006345940.1| | 7e-85 | PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Solanum tuberosum] | |||||
| JMFS143B01 | Sequence | 619 | 001001 (6) | ref|XP_006345940.1| | 2e-84 | PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Solanum tuberosum] | |||||
| JMFS166G09 | Sequence | 363 | 001001 (6) | ref|XP_006345940.1| | 2e-56 | PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Solanum tuberosum] | |||||
| JMSF050P24 | Sequence | 532 | 001001 (6) | ref|XP_004236757.1| | 3e-38 | PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Solanum lycopersic | 690 | 004697 (3) | ref|XP_009760941.1| | 2e-80 | PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Nicotiana sylvestr |
This contig is upended
. : . : . : . : . : . :
JMFS122D11+ TCAGGAAT
JMFS143B01+ CAGGAAT
JMFS057G02+ CAGGAAT
____________________________________________________________
consensus TCAGGAAT
. : . : . : . : . : . :
JMFS122D11+ CACTCTCTCTTCTAAATCCAAAGGGTCCAACTTGGCTTTCATGTGACCATTGACCTGATA
JMFS143B01+ CACTCTCTCTTCTAAATCCAAAGGGTCCAACTTGGCTTTCATGTGACCATTGACCTGATA
JMFS111D03+ TCTCTCTTCTAAATCCAAAGGGTCCAACTTGGCTTTCATGTGACCATTGACCTGATA
JMFS057G02+ CACTCTCTCTTCTANATCCAAAGGGTCCAACTTGGCTTTCATGTGACCATTGACCTGATA
____________________________________________________________
consensus CACTCTCTCTTCTAAATCCAAAGGGTCCAACTTGGCTTTCATGTGACCATTGACCTGATA
. : . : . : . : . : . :
JMFS122D11+ AGCCCTTACAAGCAACAAGAGCCGCATGCTTTCCTGAATTGTTTGGCCAGAGATCCCAGG
JMFS143B01+ AGCCCTTACAAGCAACAAGAGCCGCATGCTTTCCTGAATTGTTTGGCCAGAGATCCCAGG
JMFS111D03+ AGCCCTTACAAGCAACAAGAGCCGCATGCTTTCCTGAATTGTTTGGCCAGAGATCCCAGG
JMFS057G02+ AGCCCTTACAAGCAACAAGAGCCGCATGCTTTCCTGAATTGTTTGGCCAGAGATCCCAGG
____________________________________________________________
consensus AGCCCTTACAAGCAACAAGAGCCGCATGCTTTCCTGAATTGTTTGGCCAGAGATCCCAGG
. : . : . : . : . : . :
JMFS166G09+ ATGTAGTTGCCTGGCCAACAAAATTCCTGAAGAAATTATCCCATGACTCATCAACACT
JMFS122D11+ AGATGTAGTTGCCTGGCCAACAAAATTCCTGAAGAAATTATCCCATGACTCATCAACACT
JMFS143B01+ AGATGTAGTTGCCTGGCCAACAAAATTCCTGAAGAAATTATCCCATGACTCATCAACACT
JMFS111D03+ AGATGTAGTTGCCTGGCCAACAAAATTCCTGAAGAAATTATCCCATGACTCATCAACACT
JMFS057G02+ AGATGTAGTTGCCTGGCCAACAAAATTCCTGAAGAAATTATCCCATGACTCATCAACACT
____________________________________________________________
consensus AGATGTAGTTGCCTGGCCAACAAAATTCCTGAAGAAATTATCCCATGACTCATCAACACT
. : . : . : . : . : . :
JMFS166G09+ ATTTGGGTCTTGTTCCCATGCCCGCTGAAGCTCCTCAAGGTACACACTACTTGTCCCATC
JMFS122D11+ ATTTGGGTCTTGTTCCCATGCCCGCTGAAGCTCCTCAAGGTACACACTACTTGTCCCATC
JMFS143B01+ ATTTGGGTCTTGTTCCCATGCCCGCTGAAGCTCCTCAAGGTACACACTACTTGTCCCATC
JMFS111D03+ ATTTGGGTCTTGTTCCCATGCCCGCTGAAGCTCCTCAAGGTACACACTACTTGTCCCATC
JMFS057G02+ ATTTGGGTCTTGTTCCCATGCCCGCTGAAGCTCCTCAAGGTACACACTACTTGTCCCATC
JMSF050P24+ CTTGTTCCCATGCCCNCTGAAGCTCCTCAAGGTACACACTACTTGTCCCATC
____________________________________________________________
consensus ATTTGGGTCTTGTTCCCATGCCCGCTGAAGCTCCTCAAGGTACACACTACTTGTCCCATC
. : . : . : . : . : . :
JMFS166G09+ TAAGAAACTATCCGTCAGCTTAGAAAGTGGCACAGGCCGTGGCACAGGAGCAGATTGTGC
JMFS122D11+ TAAGAAACTATCCGTCAGCTTAGAAAGTGGCACAGGCCGTGGCACAGGAGCAGATTGTGC
JMFS143B01+ TAAGAAACTATCCGTCAGCTTAGAAAGTGGCACAGGCCGTGGCACAGGAGCAGATTGTGC
JMFS111D03+ TAAGAAACTATCCGTCAGCTTAGAAAGTGGCACAGGCCGTGGCACAGGAGCAGATTGTGC
JMFS057G02+ TAAGAAACTATCCGTCAGCTTAGAAAGTGGCACAGGCCGTGGCACAGGAGCAGATTGTGC
JMSF050P24+ TAAGAAACTATCCGTCAGCTTAGAAAGTGGCACAGGCCGTGGCACAGGAGCAGATTGTGC
____________________________________________________________
consensus TAAGAAACTATCCGTCAGCTTAGAAAGTGGCACAGGCCGTGGCACAGGAGCAGATTGTGC
. : . : . : . : . : . :
JMFS166G09+ CTTTGACCGAACAACTGTGGTGTGAAAGTACCGACTTTGAGAAGGGAGAATACGAGTTCC
JMFS122D11+ CTTTGACCGAACAACTGTGGTGTGAAAGTACCGACTTTGAGAAGGGAGAATACGAGTTCC
JMFS143B01+ CTTTGACCGAACAACTGTGGTGTGAAAGTACCGACTTTGAGAAGGGAGAATACGAGTTCC
JMFS111D03+ CTTTGACCGAACAACTGTGGTGTGAAAGTACCGACTTTGAGAAGGGAGAATACGAGTTCC
JMFS057G02+ CTTTGACCGAACAACTGTGGTGTGAAAGTACCGACTTTGAGAAGGGAGAATACGAGTTCC
JMSF050P24+ CTTTGACCGAACAACTGTGGTGTGAAAGTACCGACTTTGAGAAGGGAGAATACGAGTTCC
____________________________________________________________
consensus CTTTGACCGAACAACTGTGGTGTGAAAGTACCGACTTTGAGAAGGGAGAATACGAGTTCC
. : . : . : . : . : . :
JMFS166G09+ CGGAACATGTGACCCACCATGTGACAAAGCTCTCCTAAGGGCAAGCTTTGCCACATTAGA
JMFS122D11+ CGGAACATGTGACCCACCATGTGACAAAGCTCTCCTAAGGGCAAGCTTTGCCACATTAGA
JMFS143B01+ CGGAACATGTGACCCACCATGTGACAAAGCTCTCCTAAGGGCAAGCTTTGCCACATTAGA
JMFS111D03+ CGGAACATGTGACCCACCATGTGACAAAGCTCTCCTAAGGGCAAGCTTTGCCACATTAGA
JMFS057G02+ CGGAACATGTGACCCACCATGTGACAAAGCTCTCCTAAGGGCAAGCTTTGCCACATTAGA
JMSF050P24+ CGGAACATGTGACCCACCATGTGACAAAGCTCTCCTAAGGGCAAGCTTTGCCACATTAGA
____________________________________________________________
consensus CGGAACATGTGACCCACCATGTGACAAAGCTCTCCTAAGGGCAAGCTTTGCCACATTAGA
. : . : . : . : . : . :
JMFS166G09+ TCCAGCTCTAAACCACACCATTGCTACAACCCGAGTTCTCAAAATTCAATAACTTGTCCA
JMFS122D11+ TCCAGCTCTAAACCACACCATTGCTACAACCCGAGTTCTCAAAATTCAATAACTTGTCCA
JMFS143B01+ TCCAGCTCTAAACCACACCATTGCTACAACCCGAGTTCTCAAAATTCAATAACTTGTCCA
JMFS111D03+ TCCAGCTCTAAACCACACCATTGCTACAACCCGAGTTCTCAAAATTCAATAACTTGTCCA
JMFS057G02+ TCCAGCTCTAAACCACACCATTGCTACAACCCGAGTTCTCAAAATTCAATAACTTGTCCA
JMSF050P24+ TCCAGCTCTAAACCACACCANTGCTACAACCCGAGTTCTCAAAATTCAATAACTTGTCCA
____________________________________________________________
consensus TCCAGCTCTAAACCACACCATTGCTACAACCCGAGTTCTCAAAATTCAATAACTTGTCCA
. : . : . : . : . : . :
JMFS166G09+ AAATC
JMFS122D11+ AAATCTTATGCACTTAACCTCACTAACAGCAGTAGACCATACTCTATCTCTCGTACGGGC
JMFS143B01+ AAATCTTATGCACTTAACCTCACTAACAGCAGTAGACCATACTCTATCTCTCGTACGGGC
JMFS111D03+ AAATCTTATGCACTTAACCTCACTAACAGCAGTAGACCATAC----TCTCTCGTACGGGC
JMFS057G02+ AAATCTTATGCACTTAACCTCACTAACAGCAGTAGACCATACTCTATCTCTCGTACGGGC
JMSF050P24+ AAATCTTATGCACTTAACCTCACTAACAGCAGTAGACCATACTCTATCTCTCGTACGGGC
____________________________________________________________
consensus AAATCTTATGCACTTAACCTCACTAACAGCAGTAGACCATACTCTATCTCTCGTACGGGC
. : . : . : . : . : . :
JMFS122D11+ AAGAAATGAGAGA
JMFS143B01+ AAGAAATGAGAGAGTTTCGGCTGCTCAGAGGAACCCTAAAATGTGGGCATAACCAAAATA
JMFS111D03+ AAGAAATGAGAGAGTTTCGGCTGCTCAGAGGAACCCTAAAATGTGGGCATAACCAAAATA
JMFS057G02+ AAGAAATGAGAGAGTTTCGGCTGCTCAGAGGAACCCTAAAATGTGGGCATAACCAAAATA
JMSF050P24+ AAGAAATGAGAGAGTTTCGGCTGCTCAGAGGAACCCTAAAATGTGGGCATAACCAAAATA
____________________________________________________________
consensus AAGAAATGAGAGAGTTTCGGCTGCTCAGAGGAACCCTAAAATGTGGGCATAACCAAAATA
. : . : . : . : . : . :
JMFS143B01+ GCTTCGAGAGC
JMFS111D03+ GCTTCGAGAGC
JMFS057G02+ GCTTCGAGAGC
JMSF050P24+ GCTTCGAGAGCTCGGTNTATACTTGGAAATGGAAGTTCAAAGTTGAAACGAAGATCTTNT
____________________________________________________________
consensus GCTTCGAGAGCTCGGTNTATACTTGGAAATGGAAGTTCAAAGTTGAAACGAAGATCTTNT
. : . : . : . : . : . :
JMSF050P24+ CCTAGTAATATCTTNTACGGACTACTATTTNGGATTGCCACTTGCCTTTTTCTCAAATCC
____________________________________________________________
consensus CCTAGTAATATCTTNTACGGACTACTATTTNGGATTGCCACTTGCCTTTTTCTCAAATCC