Contig 001000:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015B19Sequence275001000 (10)ref|XP_009794726.1|6e-22PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve634009804 (8)ref|XP_009794726.1|1e-75PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve
JMFF022G14Sequence522001000 (10)ref|XP_009794726.1|3e-67PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve198009804 (8)
JMFF025J14Sequence530001000 (10)ref|XP_009794726.1|3e-67PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve679009804 (8)ref|XP_009794726.1|3e-104PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve
JMFF045H05Sequence627001000 (10)ref|XP_009794726.1|1e-83PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve494009804 (8)ref|XP_009794726.1|2e-20PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve
JMFS004C07Sequence125001000 (10)
JMSF002P12Sequence233001000 (10)gb|AHC69823.1|5e-14polygalacturonase isoenzyme 1 beta subunit [Nicotiana tabacum]664009804 (8)ref|XP_009794726.1|3e-108PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve
JMSF008D22Sequence163001000 (10)
JMSF014K19Sequence403001000 (10)gb|AHC69823.1|6e-42polygalacturonase isoenzyme 1 beta subunit [Nicotiana tabacum]774009804 (8)ref|XP_009794726.1|3e-139PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve
JMSF048C13Sequence679001000 (10)ref|XP_009794726.1|1e-91PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve770009804 (8)ref|XP_009794726.1|2e-137PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve
JMSF050P13Sequence668001000 (10)gb|AHC69823.1|3e-88polygalacturonase isoenzyme 1 beta subunit [Nicotiana tabacum]699009804 (8)ref|XP_009794726.1|9e-84PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF048C13+ TCGGAATAGGAGGTGAATCGC
JMSF050P13+ TGAATCGC
                      ____________________________________________________________
consensus TCGGAATAGGAGGTGAATCGC
 
. : . : . : . : . : . :
JMFF045H05+ AGGCCCATAGTTAGAGAACTTGCCTTTGCCGCCGGTGGAG
JMSF048C13+ ATATCTGGGACATTGACTTCAGGCCCATAGTTAGAGAACTTGCCTTTGCCGCCGGTGGAG
JMSF050P13+ ATATCTGGGACATTGACTTCAGGCCCATAGTTAGAGAACTTGCCTTTGCCGCCGGTGGAG
                      ____________________________________________________________
consensus ATATCTGGGACATTGACTTCAGGCCCATAGTTAGAGAACTTGCCTTTGCCGCCGGTGGAG
 
. : . : . : . : . : . :
JMFF045H05+ CTCGTGCCGTAGGTGTTGAAGCTCTGGTCAACCACGTTGCCGTTGGGGGCATAATTGGAA
JMSF048C13+ CTCGTGCCGTAGGTGTTGAAGCTCTGGTCAACCACGTTGCCGTTGGGGGCATAATTGGAA
JMSF050P13+ CTCGTGCCGTAGGTGTTGAAGCTCTGGTCAACCACGTTGCCGTTGGGGGCATAATTGGAA
                      ____________________________________________________________
consensus CTCGTGCCGTAGGTGTTGAAGCTCTGGTCAACCACGTTGCCGTTGGGGGCATAATTGGAA
 
. : . : . : . : . : . :
JMFF045H05+ AACCTATCCTCGTGTCCGACCGAGTCGCGGCTGTATCGGCGGAACGAGTCGACCGGAATA
JMSF048C13+ AACCTATCCTCGTGTCCGACCGAGTCGCGGCTGTATCGGCGGAACGAGTCGACCGGAATA
JMFF025J14+ TCGTGTCCGACCGAGTCGCGGCTGTATCGGCGGAACGAGTCGACCGGAATA
JMFF022G14+ CGTGTCCGACCGAGTCGCGGCTGTATCGGCGGAACGAGTCGACCGGAATA
JMSF050P13+ AACCTATCNTCGTGTCCGACCGAGTCGCGGCTGTATCGGCGGAACGAGTCGACCGGAATA
                      ____________________________________________________________
consensus AACCTATCCTCGTGTCCGACCGAGTCGCGGCTGTATCGGCGGAACGAGTCGACCGGAATA
 
. : . : . : . : . : . :
JMFF045H05+ TTCTCGTTATCCGTGTAATTCTTGAACGAATCGACCCCTCCGGCACGGTCGGTGCCGTAA
JMSF048C13+ TTCTCGTTATCCGTGTAATTCTTGAACGAATCGACCCCTCCGGCACGGTCGGTGCCGTAA
JMFF025J14+ TTCTCGTTATCCGTGTAATTCTTGAACGAATCGACCCCTCCGGCACGGTCGGTGCCGTAA
JMFF022G14+ TTCTCGTTATCCGTGTAATTCTTGAACGAATCGACCCCTCCGGCACGGTCGGTGCCGTAA
JMSF050P13+ TTCTCGTTATCCGTGTAATTCTTGAACGAATCGACCCCTCCGGCACGGTCGGTGCCGTAA
                      ____________________________________________________________
consensus TTCTCGTTATCCGTGTAATTCTTGAACGAATCGACCCCTCCGGCACGGTCGGTGCCGTAA
 
. : . : . : . : . : . :
JMFF045H05+ TTGGTGAAATTCTTGAAAGAATAGGACGCGAAATTGACGTTCCCGGCGTGCTTCTCGAGG
JMSF048C13+ TTGGTGAAATTCTTGAAAGAATAGGACGCGAAATTGACGTTCCCGGCGTGCTTCTCGAGG
JMFF025J14+ TTGGTGAAATTCTTGAAAGAATAGGACGCGAAATTGACGTTCCCGGCGTGCTTCTCGAGG
JMFF022G14+ TTGGTGAAATTCTTGAAAGAATAGGACGCGAAATTGACGTTCCCGGCGTGCTTCTCGAGG
JMSF014K19+ AAAGAATAGGACGCGAAATTGACGTTCCCGGCGTGCTTCTCGAGG
JMSF050P13+ TTGGTGAAATTCTTGAAAGAATAGGACGCGAAATTGACGTTCCCGGCGTGCTTCTCGAGG
                      ____________________________________________________________
consensus TTGGTGAAATTCTTGAAAGAATAGGACGCGAAATTGACGTTCCCGGCGTGCTTCTCGAGG
 
. : . : . : . : . : . :
JMFF045H05+ CTGGGGGACAAATCCGGGAAGCAGAGCAGATTCGCCGACGAGCAAAACCCGGGGAGCTGC
JMSF048C13+ CTGGGGGACAAATCCGGGAAGCAGAGCAGATTCGCCGACGAGCAAAACCCGGGGAGCTGC
JMFF025J14+ CTGGGGGACAAATCCGGGAAGCAGAGCAGATTCGCCGACGAGCAAAACCCGGGGAGCTGC
JMFF022G14+ CTGGGGGACAAATCCGGGAAGCAGAGCAGATTCGCCGACGAGCAAAACCCGGGGAGCTGC
JMSF014K19+ CTGGGGGACAAATCCGGGAAGCAGAGCAGATTCGCCGACGAGCAAAACCCGGGGAGCTGC
JMSF050P13+ CTGGGGGACAAATCCGGGAAGCAGAGCAGATTCGCCGACGAGCAAAACCCGGGGAGCTGC
                      ____________________________________________________________
consensus CTGGGGGACAAATCCGGGAAGCAGAGCAGATTCGCCGACGAGCAAAACCCGGGGAGCTGC
 
. : . : . : . : . : . :
JMFF045H05+ GTCGACAGCGACTCCCCCCCGTCCGCCGCCATCTTCGAATATCCGGCGTACTGGGCGGCG
JMSF048C13+ GTCGACAGCGACTCCCCCCCGTCCGCCGCCATCTTCGAATATCCGGCGTACTGGGCGGCG
JMFF025J14+ GTCGACAGCGACTCCCCCCCGTCCGCCGCCATCTTCGAATATCCGGCGTACTGGGCGGCG
JMFF022G14+ GTCGACAGCGACTCCCCCCCGTCCGCCGCCATCTTCGAATATCCGGCGTACTGGGCGGCG
JMSF014K19+ GTCGACAGCGACTCCCCCCCGTCCGCCGCCATCTTCGAATATCCGGCGTACTGGGCGGCG
JMFF015B19+ CCGCCGCCATCTTCGAATATCCGGCGTACTGGGCGGCG
JMSF050P13+ GTCGACAGCGACTCCCCCCCGTCCGCCGCCATCTTCGAATATCCGGCGTACTGGGCGGCG
                      ____________________________________________________________
consensus GTCGACAGCGACTCCCCCCCGTCCGCCGCCATCTTCGAATATCCGGCGTACTGGGCGGCG
 
. : . : . : . : . : . :
JMFF045H05+ TTCAACGGCGACGCCTTGTTTAGCAGAAACCACGGCTTCGCCAAGTCATTCGAAATCTGC
JMSF048C13+ TTCAACGGCGACGCCTTGTTTAGCAGAAACCACGGCTTCGCCAAGTCATTCGAAATCTGC
JMFF025J14+ TTCAACGGCGACGCCTTGTTTAGCAGAAACCACGGCTTCGCCAAGTCATTCGAAATCTGC
JMFF022G14+ TTCAACGGCGACGCCTTGTTTAGCAGAAACCACGGCTTCGCCAAGTCATTCGAAATCTGC
JMSF014K19+ TTCAACGGCGACGCCTTGTTTAGCAGAAACCACGGCTTCGCCAAGTCATTCGAAATCTGC
JMFF015B19+ TTCAACGGCGACGCCTTGTTTAGCAGAAACCACGGCTTCGCCAAGTCATTCGAAATCTGC
JMSF002P12+ GCGACGCCTTGTTTAGCAGAAACCACGGCTTCGCCAAGTCATTCGAAATCTGC
JMSF008D22+ TGC
JMSF050P13+ TTCAACGGCGACGCCTTGTTTAGCAGAAACCACGGCTTCGCCAAGTCATTCGAAATCTGC
                      ____________________________________________________________
consensus TTCAACGGCGACGCCTTGTTTAGCAGAAACCACGGCTTCGCCAAGTCATTCGAAATCTGC
 
. : . : . : . : . : . :
JMFF045H05+ TTCTTCCAGTAACGAATCAGGTAAGCTTTGGGCGTGAAGGGATTCGACAACTCGCCGGAA
JMSF048C13+ TTCTTCCAGTAACGAATCAGGTAAGCTTTGGGCGTGAAGGGATTCGACAACTCGCCGGAA
JMFF025J14+ TTCTTCCAGTAACGAATCAGGTAAGCTTTGGGCGTGAAGGGATTCGACAACTCGCCGGAA
JMFF022G14+ TTCTTCCAGTAACGAATCAGGTAAGCTTTGGGCGTGAAGGGATTCGACAACTCGCCGGAA
JMSF014K19+ TTCTTCCAGTAACGAATCAGGTAAGCTTTGGGCGTGAAGGGATTCGACAACTCGCCGGAA
JMFF015B19+ TTCTTCCAGTAACGAATCAGGTAAGCTTTGGGCGTGAAGGGATTCGACAACTCGCCGGAA
JMFS004C07+ CGGAG
JMSF002P12+ TTCTTCCAGTAACGAATCAGGTAAGCTTTGGGCGTGAAGGGATTCGACAACTCGCCGGAA
JMSF008D22+ TTCTTCCAGTAANGAATCAGGTAAGCTTTGGGCGTGAAGGGATTNGACAACTCGCCGGAA
JMSF050P13+ TTCTTCCAGTAACGAATCAGGTAAGCTTTGGGCGTGAAGGGATTCGACAACTCGCCGGAA
                      ____________________________________________________________
consensus TTCTTCCAGTAACGAATCAGGTAAGCTTTGGGCGTGAAGGGATTCGACAACTCGCCGGAA
 
. : . : . : . : . : . :
JMFF045H05+ TCCTCCCCACCCATAATCCCAATCACATTGAAAGATGAAGCCAAGAAGAAGAGGAGGAAG
JMSF048C13+ TCCTCCCCACCCATAATCCCAATCACATTGAAAGATGAAGCCAAGAAGAAGAGGAGGAAG
JMFF025J14+ TCCTCCCCACCCATAATCCCAATCACATTGAAAGATGAAGCCAAGAAGAAGAGGAGGAAG
JMFF022G14+ TCCTCCCCACCCATAATCCCAATCACATTGAAAGATGAAGCCAAGAAGAAGAGGAGGAAG
JMSF014K19+ TCCTCCCCACCCATAATCCCAATCACATTGAAAGATGAAGCCAAGAAGAAGAGGAGGAAG
JMFF015B19+ TCCTCCCCACCCATAATCCCAATCACATTGAAAGATGAAGCCAAGAAGAAGAGGAGGAAG
JMFS004C07+ TCCTCCCCACCCATAATCCCAATCACATTGAAAGATGAAGCCAAGAAGAAGAGGAGGAAG
JMSF002P12+ TCCTCCCCACCCATAATCCCAATCACATTGAAAGATGAAGCCAAGAAGAAGAGGAGGAAG
JMSF008D22+ TCCTCCCCACCCATAATCCCAATCACATTGAAAGATGAAGCCAAGAAGAAGAGGAGGAAG
JMSF050P13+ TCCTCCCCACCCATAATCCCAATCACATTGAAAGATGAAGCCAAGAAGAAGAGGAGGAAG
                      ____________________________________________________________
consensus TCCTCCCCACCCATAATCCCAATCACATTGAAAGATGAAGCCAAGAAGAAGAGGAGGAAG
 
. : . : . : . : . : . :
JMFF045H05+ AGAGAGAGAGGATGCATTTTAGTTTACTTGAGAGTGAGGAAGCTCTG
JMSF048C13+ AGAGAGAGAGGATGCATTTTAGTTTACTTGAGAGTGAGGAAGCTCTGCTAGTGGGCT
JMFF025J14+ AGAGAGAGAGGATGCATTTTAGTTTACTTGAGAGTGAGGAAGCTCTGCTAGTGGGCT
JMFF022G14+ AGAGAGAGAGGATGCATTTTAGTTTACTTGAGAGTGAGGAAGCTCTGCTAGT
JMSF014K19+ AGAGAGAGAGGATGCATTTTAGTTTACTTGAGAGTGAGGAAGCTCTGCTAGTGGGC
JMFF015B19+ AGAGAGAGAGGATGCATTTTAGTTTACTTGAGAGTGAGGAAGCTCTGCTAGTGGGCT
JMFS004C07+ AGAGAGAGAGGATGCATTTTAGTTTACTTGAG
JMSF002P12+ AGAGAGAGAGGATGCATTTTAGTTTACTTGAGAGTGAGGAAGCTCTGCTAGTGGGCT
JMSF008D22+ AGAGAGAGAGGATGCATTTTAGTTTACTTGAGAGTGAGGA
JMSF050P13+ AGAGAGAGAGGATGCATTTTAGTTTACTTGAGAGTGAGGAAGCTCTGCTAGTGGGCTGCC
                      ____________________________________________________________
consensus AGAGAGAGAGGATGCATTTTAGTTTACTTGAGAGTGAGGAAGCTCTGCTAGTGGGCTGCC