Contig 000998:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010P05Sequence555000998 (8)705002579 (7)ref|XP_009598097.1|6e-12PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Nicotiana tomentosiform
JMFF015P02Sequence590000998 (8)758002579 (7)ref|XP_009588928.1|5e-17PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Nicotiana tomentosiform
JMFF017I02Sequence554000998 (8)641002579 (7)ref|XP_009598097.1|6e-12PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Nicotiana tomentosiform
JMFF021F10Sequence551000998 (8)634002579 (7)ref|XP_009598097.1|7e-12PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Nicotiana tomentosiform
JMFF021N10Sequence460000998 (8)349002579 (7)ref|XP_009588928.1|1e-08PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Nicotiana tomentosiform
JMFF048K01Sequence598000998 (8)
JMSF004K03Sequence391000998 (8)440007045 (3)ref|XP_009609403.1|6e-55PREDICTED: ABC transporter G family member 32-like [Nicotiana tomentosiformis]
JMSF050G04Sequence631000998 (8)729002579 (7)ref|XP_009588928.1|2e-28PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Nicotiana tomentosiform

Alignment

This contig is upended


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JMSF050G04+                                        CGCCGCCGCCGCCGCCGCCGCCACCTTCTTC
                      ____________________________________________________________
consensus                                          CGCCGCCGCCGCCGCCGCCGCCACCTTCTTC
 
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JMFF015P02+           CTCATCAACACCTTCCATCATTGACCGGAACTCCCTACCGTAAACATCTAAGGAATCAGA
JMFF048K01+           CTCATCAACACCTTCCATCATTGACCGGAACTCCCTACCGTAAACATCTAAGGAATCAGA
JMFF017I02+                                                        ATCTAAGGAATCAGA
JMFF010P05+                                                       CATCTAAGGAATCAGA
JMFF021F10+                                                     AACATCTAAGGAATCAGA
JMSF050G04+           CTCATCAACACCTTCCATCATTGACCGGAACTCCCTACCGTAAACATCTAAGGAATCAGA
                      ____________________________________________________________
consensus             CTCATCAACACCTTCCATCATTGACCGGAACTCCCTACCGTAAACATCTAAGGAATCAGA
 
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JMFF015P02+           GCCTCCAAGTGATGATCTCTTCATGGCTGGTTGTTCTGATCTGCTGACAAAATTCCAATC
JMFF048K01+           GCCTCCAAGTGATGA--TCTTCATGGCTGGTTGTTCTGATCTGCTGACAAAATTCCAATC
JMFF017I02+           GCCTCCAAGTGATGATCTCTTCATGGCTGGTTGTTCTGATCTGCTGACAAAATTCCAATC
JMFF021N10+                                                GATCTGCTGACAAAATTCCAATC
JMFF010P05+           GCCTCCAAGTGATGATCTCTTCATGGCTGGTTGTTCTGATCTGCTGACAAAATTCCAATC
JMFF021F10+           GCCTCCAAGTGATGATCTCTTCATGGCTGGTTGTTCTGATCTGCTGACAAAATTCCAATC
JMSF050G04+           GCCTCCAAGTGATGATCTCTTCATGGCTGGTTGTTCTGATCTGCTGACAAAATTCCAATC
                      ____________________________________________________________
consensus             GCCTCCAAGTGATGATCTCTTCATGGCTGGTTGTTCTGATCTGCTGACAAAATTCCAATC
 
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JMFF015P02+           TTTTTACTGAAACTTCTGGGGAATCTTTCAAGAACTTTGGGCTGTTGTTCTTGGACTGTA
JMFF048K01+           TTTTTACTGAAACTTCTGGGGAATCTTTCAAGAACTTTGGGCTGTTGTTCTTGGACTGTA
JMFF017I02+           TTTTTACTGAAACTTCTGGGGAATCTTTCAAGAACTTTGGGCTGTTGTTCTTGGACTGTA
JMFF021N10+           TTTTTACTGAAACTTCTGGGGAATCTTTCAAGAACTTTGGGCTGTTGTTCTTGGACTGTA
JMFF010P05+           TTTTTACTGAAACTTCTGGGGAATCTTTCAAGAACTTTGGGCTGTTGTTCTTGGACTGTA
JMFF021F10+           TTTTTACTGAAACTTCTGGGGAATCTTTCAAGAACTTTGGGCTGTTGTTCTTGGACCGTA
JMSF050G04+           TTTTTACTGAAACTTCTGGGGAATCTTTCAAGAACTTTGGGCTGTTGTTCTTGGACTGTA
                      ____________________________________________________________
consensus             TTTTTACTGAAACTTCTGGGGAATCTTTCAAGAACTTTGGGCTGTTGTTCTTGGACTGTA
 
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JMFF015P02+           GTAATGAAGAAGAAGAAGAAGAAGATGATGATGATCAAGAACAGTTCAGAAAAGAAAGCA
JMFF048K01+           GTAATGAAGAAGAAGAAGAAGAAGATGATGATGATCAAGAACAGTTCAGAAAAGAAAGCA
JMFF017I02+           GTAATGAAGAAGAAGAAGAAGAAGATGATGATGATCAAGAACAGTTCAGAAAAGAAAGCA
JMFF021N10+           GTAATGAAGAAGAAGAAGAAGAAGATGATGATGATCAAGAACAGTTCAGAAAAGAAAGCA
JMSF004K03+                               GAAGATGATGATGATCAAGANCAGTTCAGAAAAGAAAGCA
JMFF010P05+           GTAATGAAGAAGAAGAAGAAGAAGATGATGATGATCAAGAACAGTTCAGAAAAGAAAGCA
JMFF021F10+           GTAATGAAGAAGAAGAAGAAGAAGATGATGATGATCAAGAACAGTTCAGAAAAGAAAGCA
JMSF050G04+           GTAATGAAGAAGAAGAAGAAGAAGATGATGATGATCAAGAACAGTTCAGAAAAGAAAGCA
                      ____________________________________________________________
consensus             GTAATGAAGAAGAAGAAGAAGAAGATGATGATGATCAAGAACAGTTCAGAAAAGAAAGCA
 
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JMFF015P02+           AGCTGGGAAACAAGTCATCATGACTCATGAGAACCCCTTTTCACATCTTTTAAGCACAAA
JMFF048K01+           AGCTGGGAAACAAGTCATCATGACTCATGAGAACCCCTTTTCACATCTTTTAAGCACAAA
JMFF017I02+           AGCTGGGAAACAAGTCATCATGACTCATGAGAACCCCTTTTCACATCTTTTAAGCACAAA
JMFF021N10+           AGCTGGGAAACAAGTCATCATGACTCATGAGAACCCCTTTTCACATCTTTTAAGCACAAA
JMSF004K03+           AGCTGGGAAACAAGTCATCATGACTCATGAGAACCCCTTTTCACATCTTTTAAGCACAAA
JMFF010P05+           AGCTGGGAAACAAGTCATCATGACTCATGAGAACCCCTTTTCACATCTTTTAAGCACAAA
JMFF021F10+           AGCTGGGAAACAAGTCATCATGACTCATGAGAACCCCTTTTCACATCTTTTAAGCACAAA
JMSF050G04+           AGCTGGGAAACAAGTCATCATGACTCATGAGAACCCCTTTTCACATCTTTTAAGCGCAAA
                      ____________________________________________________________
consensus             AGCTGGGAAACAAGTCATCATGACTCATGAGAACCCCTTTTCACATCTTTTAAGCACAAA
 
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JMFF015P02+           AACTCCATTTTTGTACTTGTTAGGTGGCACCATTACTGCTAGTTTAGTTCAGTTCATCCA
JMFF048K01+           AACTCCATTTTTGTACTTGTTAGGTGGCACCATTACTGCTAGTTTAGTTCAGTTCATCCA
JMFF017I02+           AACTCCATTTTTGTACTTGTTAGGTGGCACCATTACTGCTAGTTTAGTTCAGTTCATCCA
JMFF021N10+           AACTCCATTTTTGTACTTGTTAGGTGGCACCATTACTGCTAGTTTAGTTCAGTTCATCCA
JMSF004K03+           AACTCCATTTTTGTACTTGTTAGGTGGCACCATTACTGCTAGTTTAGTTCAGTTCATCCA
JMFF010P05+           AACTCCATTTTTGTACTTGTTAGGTGGCACCATTACTGCTAGTTTAGTTCAGTTCATCCA
JMFF021F10+           AACCCCATTTTTGTACTTGTTAGGTGGCACCATTACTGCTAGTTTAGTTCAGTTCATCCA
JMSF050G04+           AACTCCATTTTTGTACTTGTTAGGTGGCACCATTACTGCTAGTTTAGTTCAGTTCATCCA
                      ____________________________________________________________
consensus             AACTCCATTTTTGTACTTGTTAGGTGGCACCATTACTGCTAGTTTAGTTCAGTTCATCCA
 
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JMFF015P02+           CCTATGAACCCACCAAGAACAAGCAAAACCCAATAATGCAGAAAGGGAATAATGGAATGA
JMFF048K01+           CCTATGAACCCACCAAGAACAAGCAAAACCCAATAATGCAGAAAGGGAATAATGGAATGA
JMFF017I02+           CCTATGAACCCACCAAGAACAAGCAAAACCCAATAATGCAGAAAGGGAATAATGGAATGA
JMFF021N10+           CCTATGAACCCACCAAGAACAAGCAAAACCCAATAATGCAGAAAGGGAATAATGGAATGA
JMSF004K03+           CCTATGAACCCACCAAGAACAAGCAAAACCCAATAATGCAGAAAGGGAATAATGGAATGA
JMFF010P05+           CCTATGAACCCACCAAGAACAAGCAAAACCCAATAATGCAGAAAGGGAATAATGGAATGA
JMFF021F10+           CCTATGAACCCACCAAGAACAAGCAAAACCCAATAATGCAGAAAGGGAATAATGGAATGA
JMSF050G04+           CCTATGAACCCACCAAGAACAAGCAAAACCCAATAATGCAGAAAGGGAATAATGGAATGA
                      ____________________________________________________________
consensus             CCTATGAACCCACCAAGAACAAGCAAAACCCAATAATGCAGAAAGGGAATAATGGAATGA
 
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JMFF015P02+           TGGAAGCAAAACTGGGGAAAATGTCTCCTCTTTCTCTCCAAACATTTCCATGCTTACATC
JMFF048K01+           TGGAAGCAAAACTGGGGAAAATGTCTCCTCTTTCTCTCCAAACATTTCCATGCTTACATC
JMFF017I02+           TGGAAGCAAAACTGGGGAAAATGTCTCCTCTTTCTCTCCAAACATTTCCATGCTTACATC
JMFF021N10+           TGGAAGCAAAACTGGGGAAAATGTCTCCTCTTTCTCTCCAAACACTTCCATGCTTACATC
JMSF004K03+           TGGAAGCAAAACTGGGGAAAATGTCTCCTCTTTCTCTCCAAACATTTCCATGCTTACATC
JMFF010P05+           TGGAAGCAAAACTGGGGAAAATGTCTCCTCTTTCTCTCCAAACATTTCCATGCTTACATC
JMFF021F10+           TGGAAGCAAAACTGGGGAAAATGTCTCCTCTTTCTCTCCAAACATTTCCATGCTTACATC
JMSF050G04+           TGGAAGCAAAACTGGGGAAAATGTCTCCTCTTTCTCTCCAAACATTTCCATGCTTACATC
                      ____________________________________________________________
consensus             TGGAAGCAAAACTGGGGAAAATGTCTCCTCTTTCTCTCCAAACATTTCCATGCTTACATC
 
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JMFF015P02+           ATTAGTTGTTGTTAGAACACAGGCTTAGGTCAGAAGACTCTCAGAGCTGTTCATCTACAA
JMFF048K01+           ATTAGTTGTTGTTAGAACACAGGCTTAGGTCAGAAGACTCTCAGAGCTGTTCATCTACAA
JMFF017I02+           ATTAGTTGTTGTTAGAACACAGGCTTAGGTCAGAAGACTCTCAGAGCTGTTCATCTACAA
JMFF021N10+           ATTAGTTGTTGTTAGAACACAGGCTTAGGTCAGAAGACTCTCAGAGCTGTTCATCTACAA
JMSF004K03+           ATTAGTTGTTGTTAGAACACAGGCTTAGGTCAGAAGACTCTCAGAGCTGTTCATCTACAA
JMFF010P05+           ATTAGTTGTTGTTAGAACACAGGCTTAGGTCAGAAGACTCTCAGAGCTGTTCATCTACAA
JMFF021F10+           ATTAGTTGTTGTTAGAACACAGGCTTAGGTCAGAAGACTCTCAGAGCTGTTCATCTACAA
JMSF050G04+           ATTAGTTGTTGTTAGAACACAGGCTTAGGTCAGAAGACTCTCAGAGCTGTTCATCTACAA
                      ____________________________________________________________
consensus             ATTAGTTGTTGTTAGAACACAGGCTTAGGTCAGAAGACTCTCAGAGCTGTTCATCTACAA
 
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JMFF015P02+           GAAGAAGAGTAGAGGACAGGGAAACAAGAAGAAGAAGAAGGAGAGAGCTT          
JMFF048K01+           GAAGAAGAGTAGAGGACAGGGAAACAAGAAGAAGAAGAAGGAGAGAGCCTAAT       
JMFF017I02+           GAAGAAGAGTAGAGGACAGGGAAACAAGAAGAAGAAGAAGGAGAGAGCTTAAT       
JMFF021N10+           GAAGAAGAGTAGAG                                              
JMSF004K03+           GAAGAAGAGTAGAGGACAGGGAAACAAGAAGAAGAAGAAGGAGAGAGC            
JMFF010P05+           GAAGAAGAGTAGAGGACAGGGAAACAAGAAGAAGAAGAAGGAGAGAGCTTAAT       
JMFF021F10+           GAAGAAGAGTAGAGGACAGGGAAACAAGAAGAAGAAGAAGGAGAGAGCTTAAT       
JMSF050G04+           GAAGAAGAGTAGAGGACAGGGAAACAAGAAGAAGAAGAAGGAGAGAGCTTAATGGACTTC
                      ____________________________________________________________
consensus             GAAGAAGAGTAGAGGACAGGGAAACAAGAAGAAGAAGAAGGAGAGAGCTTAATGGACTTC