Contig 000989:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF025O11Sequence212000989 (2)732007237 (2)ref|XP_009615447.1|169PREDICTED: uncharacterized protein LOC104108165, partial [Nicotiana tomentosifo
JMSF049J11Sequence190000989 (2)752007237 (2)ref|XP_009615447.1|177PREDICTED: uncharacterized protein LOC104108165, partial [Nicotiana tomentosifo

Alignment

This contig is upended


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JMSF025O11+                                       ANTTTACCCNATTNGNCCNTAGGGNAAAAAAA
JMSF049J11+                                                                AAAAAAA
                      ____________________________________________________________
consensus                                         ANTTTACCCNATTNGNCCNTAGGGNAAAAAAA
 
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JMSF025O11+           AAAAAAAAAACTCCATTGATGGGTTCAGATTTTTTAATTTCGACGTACCCAATACAATAT
JMSF049J11+           AAAAAAAAAACTCCATTGATGGGTTCAGATTTTTTAATTTCGACGTACCCAATNCAATAT
                      ____________________________________________________________
consensus             AAAAAAAAAACTCCATTGATGGGTTCAGATTTTTTAATTTCGACGTACCCAATACAATAT
 
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JMSF025O11+           ATTTGCTGCCTATAAATCAAATATTGAAATCATTTTTAAATTTTACATATTCCAAGAAGA
JMSF049J11+           ATTTGCTGCCTATAAATCAAATATTGAAATCATTTTTAAATTTTACATATTCCAAGAAGA
                      ____________________________________________________________
consensus             ATTTGCTGCCTATAAATCAAATATTGAAATCATTTTTAAATTTTACATATTCCAAGAAGA
 
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JMSF025O11+           CAGGATTGTATCAAGCTTAAAGGAAAGCAGTAAAAACTATGTCTTGGGTAATTTAATTGC
JMSF049J11+           CAGGATTGTATCAAGCTTAAAGGAAAGCAGTAAAAACTATGTCTTGGGTAATTTAATTGC
                      ____________________________________________________________
consensus             CAGGATTGTATCAAGCTTAAAGGAAAGCAGTAAAAACTATGTCTTGGGTAATTTAATTGC