Contig 000987:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN002B09Sequence603000987 (6)ref|XP_009801997.1|7e-88PREDICTED: mitochondrial outer membrane protein porin 2-like [Nicotiana sylvest
JMSF043P23Sequence685000987 (6)ref|XP_009801997.1|2e-102PREDICTED: mitochondrial outer membrane protein porin 2-like [Nicotiana sylvest726000987 (6)ref|XP_009801997.1|5e-92PREDICTED: mitochondrial outer membrane protein porin 2-like [Nicotiana sylvest
JMSF045J07Sequence857000987 (6)ref|XP_009801997.1|9e-86PREDICTED: mitochondrial outer membrane protein porin 2-like [Nicotiana sylvest777024673ref|XP_009801997.1|6e-52PREDICTED: mitochondrial outer membrane protein porin 2-like [Nicotiana sylvest
JMSF049I13Sequence674000987 (6)ref|XP_009801997.1|2e-88PREDICTED: mitochondrial outer membrane protein porin 2-like [Nicotiana sylvest744000987 (6)ref|XP_009801997.1|6e-93PREDICTED: mitochondrial outer membrane protein porin 2-like [Nicotiana sylvest

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF043P23- AGATTGTTGCTAGACAGTTTTCTCACAAAAGGATATTAGGAAAAAG
rJMSF049I13- GCTCAATGAATAGATTGTTGCTAGACAGTTTTCTCACAAAAGGATATTAGGAAAAAG
                      ____________________________________________________________
consensus GCTCAATGAATAGATTGTTGCTAGACAGTTTTCTCACAAAAGGATATTAGGAAAAAG
 
. : . : . : . : . : . :
rJMSF043P23- TAAACAGAACTGGACAAGACCATGCCATGGCCACTAAATCAAACAAACCCTATATGTCAT
rJMSF049I13- TAAACAGAACTGGACAAGACCATGCCATGGCCACTAAATCAAACAAACCCTATATGTCAT
                      ____________________________________________________________
consensus TAAACAGAACTGGACAAGACCATGCCATGGCCACTAAATCAAACAAACCCTATATGTCAT
 
. : . : . : . : . : . :
rJMSF043P23- CCCACATCTGTTGAAAAGTATTTGCAACCTTATTGTGCTTCAACGTTATCACAGGGGAAA
rJMSF049I13- CCCACATCTGTTGAAAAGTATTTGCAACCTTATTGTGCTTCAACGTTATCACAGGGGAAA
                      ____________________________________________________________
consensus CCCACATCTGTTGAAAAGTATTTGCAACCTTATTGTGCTTCAACGTTATCACAGGGGAAA
 
. : . : . : . : . : . :
rJMSF043P23- AAAATGTTTTAATCAATTAAGGCTGTGGTGTCAAAAAACAAAATGAAATTAAGGCTTGAG
rJMSF049I13- AAAATGTTTTAATCAATTAAGGCTGTGGTGTCAAAAAACAAAATGAAATTAAGGCTTGAG
                      ____________________________________________________________
consensus AAAATGTTTTAATCAATTAAGGCTGTGGTGTCAAAAAACAAAATGAAATTAAGGCTTGAG
 
. : . : . : . : . : . :
rJMSF043P23- AGCAAGTGACACACCGAACCTTGGAGTCTTCTCCAAGGCCTTGGTATCAAACTCACTCGA
rJMSF049I13- AGCAAGTGACACACCGAACCTTGGAGTCTTCTCCAAGGCCTTGGTATCAAACTCACTCGA
                      ____________________________________________________________
consensus AGCAAGTGACACACCGAACCTTGGAGTCTTCTCCAAGGCCTTGGTATCAAACTCACTCGA
 
. : . : . : . : . : . :
rJMSF043P23- GATGGACAAAATTGATTTTGGTACCACCTCGTGCTGTAAGAGAGCACCTAATTTGCCGTG
rJMSF049I13- GATGGACAAAATTGATTTTGGTACCACCTCGTGCTGTAAGAGAGCACCTAATTTGCCGTG
                      ____________________________________________________________
consensus GATGGACAAAATTGATTTTGGTACCACCTCGTGCTGTAAGAGAGCACCTAATTTGCCGTG
 
. : . : . : . : . : . :
rJMSF043P23- ATTGTTGAGCTTCAGCTTCACATTTGTCAGGTGATCAATAGCGCACGATCCACCAACTGT
rJMSF049I13- ATTGTTGAGCTTCAGCTTCACATTTGTCAGGTGATCAATAGCGCACGATCCACCAACTGT
                      ____________________________________________________________
consensus ATTGTTGAGCTTCAGCTTCACATTTGTCAGGTGATCAATAGCGCACGATCCACCAACTGT
 
. : . : . : . : . : . :
rJMSF043P23- AAATGTGTTCTCATTGGTGGAGAATCTTCTAACAATCTCTCCTACTGCAGCAGTCTTCTT
rJMSF049I13- AAATGTGTTCTCATTGGTGGAGAATCTTCTAACAATCTCTCCTACTGCAGCAGTCTTCTT
JMSF043P23+ CTACTGCAGCAGTCTTCTT
                      ____________________________________________________________
consensus AAATGTGTTCTCATTGGTGGAGAATCTTCTAACAATCTCTCCTACTGCAGCAGTCTTCTT
 
. : . : . : . : . : . :
rJMSF043P23- CAATGCATCCAGATGCTGAGTATATGATGCCTTTATTGTGTCCCCCTTGTCTCCCAAGAT
rJMSF049I13- CAATGCATCCAGATGCTGAGTATATGATGCCTTTATTGTGTCCCCCTTGTCTCCCAAGAT
JMFN002B09+ TCTCCCAAGAT
JMSF043P23+ CAATGCATCCAGATGCTGAGTATATGATGCCTTTATTGTGTCCCCCTTGTCTCCCAAGAT
JMSF045J07+ CAAGAT
JMSF049I13+ TTGTCTCCCAAGAT
                      ____________________________________________________________
consensus CAATGCATCCAGATGCTGAGTATATGATGCCTTTATTGTGTCCCCCTTGTCTCCCAAGAT
 
. : . : . : . : . : . :
rJMSF043P23- TATAGCAGCGCAAGATTCGGGTCTTGTTACACTGATACCAGCATTATACTTTGATAATTT
rJMSF049I13- TATAGCAGCGCAAGATTCGGGTCTTGTTACACTGATACCAGCATTATACTTTGATAATTT
JMFN002B09+ TATAGCAGCGCAAGATTCGGGTCTTGTTACACTGATACCAGCATTATACTTTGATAATTT
JMSF043P23+ TATAGCAGCGCAAGATTCGGGTCTTGTTACACTGATACCAGCATTATACTTTGATAATTT
JMSF045J07+ TATAGCAGCGCAAGATTCGGGTCTTGTTACACTGATACCAGCATTATACTTTGATAATTT
JMSF049I13+ TATAGCAGCGCAAGATTCGGGTCTTGTTACACTGATACCAGCATTATACTTTGATAATTT
                      ____________________________________________________________
consensus TATAGCAGCGCAAGATTCGGGTCTTGTTACACTGATACCAGCATTATACTTTGATAATTT
 
. : . : . : . : . : . :
rJMSF043P23- ACCAGAAGCAGTTTCGTAACCTGCTTCAGCACCAATAGCAAAGGTTGGAGTGCCAAGGGT
rJMSF049I13- ACCAGAAGCAGTTTCGTAACCTGCTTCAGCACCAATAGCAAAGGTTGGAGTGCCAAGGGT
JMFN002B09+ ACCAGAAGCAGTTTCGTAACCTGCTTCAGCACCAATAGCAAAGGTTGGAGTGCCAAGGGT
JMSF043P23+ ACCAGAAGCAGTTTCGTAACCTGCTTCAGCACCAATAGCAAAGGTTGGAGTGCCAAGGGT
JMSF045J07+ ACCAGAAGCAGTTTCGTAACCTGCTTCAGCACCAATAGCAAAGGTTGGAGTGCCAAGGGT
JMSF049I13+ ACCAGAAGCAGTTTCGTAACCTGCTTCAGCACCAATAGCAAAGGTTGGAGTGCCAAGGGT
                      ____________________________________________________________
consensus ACCAGAAGCAGTTTCGTAACCTGCTTCAGCACCAATAGCAAAGGTTGGAGTGCCAAGGGT
 
. : . : . : . : . : . :
rJMSF043P23- AAGAGAAAGATCAATGATGGGTGAGTGATTGGGGGCAACAACAGCTGTTGTGAANGTTGC
rJMSF049I13- AAGAGAAAGATCAATGATGGGTGAGTGATTGGGGGCAACAACAGCTGTTGTGAAGGTTGC
JMFN002B09+ AAGAGAAAGATCAATGATGGGTGAGTGATTGGGGGCAACAACAGCTGTTGTGAAGGTTGC
JMSF043P23+ AAGAGAAAGATCAATGATGGGTGAGTGATTGGGGGCAACAACAGCTGTTGTGAAGGTTGC
JMSF045J07+ AAGAGAAAGATCAATGATGGGTGAGTGATTGGGGGCAACAACAGCTGTTGTGAAGGTTGC
JMSF049I13+ AAGAGAAAGATCAATGATGGGTGAGTGATTGGGGGCAACAACAGCTGTTGTGAAGGTTGC
                      ____________________________________________________________
consensus AAGAGAAAGATCAATGATGGGTGAGTGATTGGGGGCAACAACAGCTGTTGTGAAGGTTGC
 
. : . : . : . : . : . :
rJMSF043P23- ATGGTGGTGGAGGTACTCAA
rJMSF049I13- ATGGTGGTGGAGGTACTCAAACTCCAG
JMFN002B09+ ATGGTGGTGGAGGTACTCAAACTCCAGCTTGACAGAATTATAATTAGGAAATTTCACAGA
JMSF043P23+ ATGGTGGTGGAGGTACTCAAACTCCAGCTTGACAGAATTATAATTAGGAAATTTCACAGA
JMSF045J07+ ATGGTGGTGGAGGTACTCAAACTCCAGCTTGACAGAATTATAATTAGGAAATTTCACAGA
JMSF049I13+ ATGGTGGTGGAGGTACTCAAACTCCAGCTTAACAGAATTATAATTAGGAAATTTCACAGA
                      ____________________________________________________________
consensus ATGGTGGTGGAGGTACTCAAACTCCAGCTTGACAGAATTATAATTAGGAAATTTCACAGA
 
. : . : . : . : . : . :
JMFN002B09+ GGCAATGGTCTTCGATGATGGGACAATGTTGGTGAAAGTCAGAGTTGTAAAGATATTTGA
JMSF043P23+ GGCAATGGTCTTCGATGATGGGACAATGTTGGTGAAAGTCAGAGTTGTAAAGATATTTGA
JMSF045J07+ GGCAATGGTCTTCGATGATGGGACAATGTTGGTGAAAGTCAGAGTTGTAAAGATATTTGA
JMSF049I13+ GGCAATGGTCTTCGATGATGGGACAATGTTGGTGAAAGTCAGAGTTGTAAAGATATTTGA
                      ____________________________________________________________
consensus GGCAATGGTCTTCGATGATGGGACAATGTTGGTGAAAGTCAGAGTTGTAAAGATATTTGA
 
. : . : . : . : . : . :
JMFN002B09+ TTCTGTATCAACTTTGACATCAACCGTAGTGTTCTTATATTTGTATTGCACTGCTACATC
JMSF043P23+ TTCTGTATCAACTTTGACATCAACCGTAGTGTTCTTATATTTGTATTGCACTGCTACATC
JMSF045J07+ TTCTGTATCAACTTTGACATCAACCGTAGTGTTCTTATATTTGTATTGCACTGCTACATC
JMSF049I13+ TTCTGTATCAACTTTGACATCAACCGTAGTGTTCTTATATTTGTATTGCACTGCTACATC
                      ____________________________________________________________
consensus TTCTGTATCAACTTTGACATCAACCGTAGTGTTCTTATATTTGTATTGCACTGCTACATC
 
. : . : . : . : . : . :
JMFN002B09+ TCCAGTTGAAAGAGCTCCTTTCTTAACTGCAGTTGGTGTTATGGTCACTCCGCAGTCACT
JMSF043P23+ TCCAGTTGAAAGAGCTCCTTTCTTAACTGCAGTTGGTGTTATGGTCACTCCGCAGTCACT
JMSF045J07+ TCCAGTTGAAAGAGCTCCTTTCTTAACTGCAGTTGGTGTTATGGTCACTCCGCAGTCACT
JMSF049I13+ TCCAGTTGAAAGAGCTCCTTTCTTAACTGCAGTTGGTGTTATGGTCACTCCGCAGTCACT
                      ____________________________________________________________
consensus TCCAGTTGAAAGAGCTCCTTTCTTAACTGCAGTTGGTGTTATGGTCACTCCGCAGTCACT
 
. : . : . : . : . : . :
JMFN002B09+ GTGGGTCGACACAGATATCTTCTGATCCGAGATATAGTCCTTCGTCAGCAGATCTTTGGC
JMSF043P23+ GTGGGTCGACACAGATATCTTCTGATCCGAGATATAGTCCTTCGTCAGCAGATCTTTGGC
JMSF045J07+ GTGGGTCGACACAGATATCTTCTGATCCGAGATATAGTCCTTCGTCAGCAGATCTTTGGC
JMSF049I13+ GTGGGTCGACACAGATATCTTCTGATCCGAGATATAGTCCTTCGTCAGCAGATCTTTGGC
                      ____________________________________________________________
consensus GTGGGTCGACACAGATATCTTCTGATCCGAGATATAGTCCTTCGTCAGCAGATCTTTGGC
 
. : . : . : . : . : . :
JMFN002B09+ TTTCTTGCCAATACCGGAGAAGAGACCAGGTCCGGTAGTCATTTTGTCTCAGGCCGATGA
JMSF043P23+ TTTCTTGCCAATACCGGAGAAGAGACCAGGTCCGGTAGTCATTTTGTCTCAGGCCGATGA
JMSF045J07+ TTTCTTGCCAATACCGGAGAAGAGACCAGGTCCGGTAGTCATTTTGTCTCAGGCCGATGA
JMSF049I13+ TTTCTTGCCAATACCGGAGAAGAGACCAGGTCCGGTAGTCATTTTGTCTCAGGCCGATGA
                      ____________________________________________________________
consensus TTTCTTGCCAATACCGGAGAAGAGACCAGGTCCGGTAGTCATTTTGTCTCAGGCCGATGA
 
. : . : . : . : . : . :
JMFN002B09+ GATCACCAGAGATGGAGAGTATTGAAGAGAATCGGGAAGGCGGAACTCTGAA
JMSF043P23+ GATCACCAGAGATGGAGAGTATTGCAGAGAATCGGGAAGGCGGAACTCTGAATCTGGAAA
JMSF045J07+ GATCACCAGAGATGGAGAGTATTGCAGAGAATCGGGAAGGCGGAACTCTGAATCTGGAAA
JMSF049I13+ GATCACCAGAGATGGAGAGTATTGCAGAGAATCGGGAAGGCGGAACTCTGAATCTGGAAA
                      ____________________________________________________________
consensus GATCACCAGAGATGGAGAGTATTGCAGAGAATCGGGAAGGCGGAACTCTGAATCTGGAAA
 
. : . : . : . : . : . :
JMSF043P23+ CCGAG
JMSF045J07+ CCGAGAAGGAGGAAGA
JMSF049I13+ CCGAGAAGGAGGAAGACAGCTCCAAAAGAGAAATTCGTTTTTATTGTTACCATTATCATC
                      ____________________________________________________________
consensus CCGAGAAGGAGGAAGACAGCTCCAAAAGAGAAATTCGTTTTTATTGTTACCATTATCATC