| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN002B09 | Sequence | 603 | 000987 (6) | ref|XP_009801997.1| | 7e-88 | PREDICTED: mitochondrial outer membrane protein porin 2-like [Nicotiana sylvest | |||||
| JMSF043P23 | Sequence | 685 | 000987 (6) | ref|XP_009801997.1| | 2e-102 | PREDICTED: mitochondrial outer membrane protein porin 2-like [Nicotiana sylvest | 726 | 000987 (6) | ref|XP_009801997.1| | 5e-92 | PREDICTED: mitochondrial outer membrane protein porin 2-like [Nicotiana sylvest |
| JMSF045J07 | Sequence | 857 | 000987 (6) | ref|XP_009801997.1| | 9e-86 | PREDICTED: mitochondrial outer membrane protein porin 2-like [Nicotiana sylvest | 777 | 024673 | ref|XP_009801997.1| | 6e-52 | PREDICTED: mitochondrial outer membrane protein porin 2-like [Nicotiana sylvest |
| JMSF049I13 | Sequence | 674 | 000987 (6) | ref|XP_009801997.1| | 2e-88 | PREDICTED: mitochondrial outer membrane protein porin 2-like [Nicotiana sylvest | 744 | 000987 (6) | ref|XP_009801997.1| | 6e-93 | PREDICTED: mitochondrial outer membrane protein porin 2-like [Nicotiana sylvest |
This contig is upended
. : . : . : . : . : . :
rJMSF043P23- AGATTGTTGCTAGACAGTTTTCTCACAAAAGGATATTAGGAAAAAG
rJMSF049I13- GCTCAATGAATAGATTGTTGCTAGACAGTTTTCTCACAAAAGGATATTAGGAAAAAG
____________________________________________________________
consensus GCTCAATGAATAGATTGTTGCTAGACAGTTTTCTCACAAAAGGATATTAGGAAAAAG
. : . : . : . : . : . :
rJMSF043P23- TAAACAGAACTGGACAAGACCATGCCATGGCCACTAAATCAAACAAACCCTATATGTCAT
rJMSF049I13- TAAACAGAACTGGACAAGACCATGCCATGGCCACTAAATCAAACAAACCCTATATGTCAT
____________________________________________________________
consensus TAAACAGAACTGGACAAGACCATGCCATGGCCACTAAATCAAACAAACCCTATATGTCAT
. : . : . : . : . : . :
rJMSF043P23- CCCACATCTGTTGAAAAGTATTTGCAACCTTATTGTGCTTCAACGTTATCACAGGGGAAA
rJMSF049I13- CCCACATCTGTTGAAAAGTATTTGCAACCTTATTGTGCTTCAACGTTATCACAGGGGAAA
____________________________________________________________
consensus CCCACATCTGTTGAAAAGTATTTGCAACCTTATTGTGCTTCAACGTTATCACAGGGGAAA
. : . : . : . : . : . :
rJMSF043P23- AAAATGTTTTAATCAATTAAGGCTGTGGTGTCAAAAAACAAAATGAAATTAAGGCTTGAG
rJMSF049I13- AAAATGTTTTAATCAATTAAGGCTGTGGTGTCAAAAAACAAAATGAAATTAAGGCTTGAG
____________________________________________________________
consensus AAAATGTTTTAATCAATTAAGGCTGTGGTGTCAAAAAACAAAATGAAATTAAGGCTTGAG
. : . : . : . : . : . :
rJMSF043P23- AGCAAGTGACACACCGAACCTTGGAGTCTTCTCCAAGGCCTTGGTATCAAACTCACTCGA
rJMSF049I13- AGCAAGTGACACACCGAACCTTGGAGTCTTCTCCAAGGCCTTGGTATCAAACTCACTCGA
____________________________________________________________
consensus AGCAAGTGACACACCGAACCTTGGAGTCTTCTCCAAGGCCTTGGTATCAAACTCACTCGA
. : . : . : . : . : . :
rJMSF043P23- GATGGACAAAATTGATTTTGGTACCACCTCGTGCTGTAAGAGAGCACCTAATTTGCCGTG
rJMSF049I13- GATGGACAAAATTGATTTTGGTACCACCTCGTGCTGTAAGAGAGCACCTAATTTGCCGTG
____________________________________________________________
consensus GATGGACAAAATTGATTTTGGTACCACCTCGTGCTGTAAGAGAGCACCTAATTTGCCGTG
. : . : . : . : . : . :
rJMSF043P23- ATTGTTGAGCTTCAGCTTCACATTTGTCAGGTGATCAATAGCGCACGATCCACCAACTGT
rJMSF049I13- ATTGTTGAGCTTCAGCTTCACATTTGTCAGGTGATCAATAGCGCACGATCCACCAACTGT
____________________________________________________________
consensus ATTGTTGAGCTTCAGCTTCACATTTGTCAGGTGATCAATAGCGCACGATCCACCAACTGT
. : . : . : . : . : . :
rJMSF043P23- AAATGTGTTCTCATTGGTGGAGAATCTTCTAACAATCTCTCCTACTGCAGCAGTCTTCTT
rJMSF049I13- AAATGTGTTCTCATTGGTGGAGAATCTTCTAACAATCTCTCCTACTGCAGCAGTCTTCTT
JMSF043P23+ CTACTGCAGCAGTCTTCTT
____________________________________________________________
consensus AAATGTGTTCTCATTGGTGGAGAATCTTCTAACAATCTCTCCTACTGCAGCAGTCTTCTT
. : . : . : . : . : . :
rJMSF043P23- CAATGCATCCAGATGCTGAGTATATGATGCCTTTATTGTGTCCCCCTTGTCTCCCAAGAT
rJMSF049I13- CAATGCATCCAGATGCTGAGTATATGATGCCTTTATTGTGTCCCCCTTGTCTCCCAAGAT
JMFN002B09+ TCTCCCAAGAT
JMSF043P23+ CAATGCATCCAGATGCTGAGTATATGATGCCTTTATTGTGTCCCCCTTGTCTCCCAAGAT
JMSF045J07+ CAAGAT
JMSF049I13+ TTGTCTCCCAAGAT
____________________________________________________________
consensus CAATGCATCCAGATGCTGAGTATATGATGCCTTTATTGTGTCCCCCTTGTCTCCCAAGAT
. : . : . : . : . : . :
rJMSF043P23- TATAGCAGCGCAAGATTCGGGTCTTGTTACACTGATACCAGCATTATACTTTGATAATTT
rJMSF049I13- TATAGCAGCGCAAGATTCGGGTCTTGTTACACTGATACCAGCATTATACTTTGATAATTT
JMFN002B09+ TATAGCAGCGCAAGATTCGGGTCTTGTTACACTGATACCAGCATTATACTTTGATAATTT
JMSF043P23+ TATAGCAGCGCAAGATTCGGGTCTTGTTACACTGATACCAGCATTATACTTTGATAATTT
JMSF045J07+ TATAGCAGCGCAAGATTCGGGTCTTGTTACACTGATACCAGCATTATACTTTGATAATTT
JMSF049I13+ TATAGCAGCGCAAGATTCGGGTCTTGTTACACTGATACCAGCATTATACTTTGATAATTT
____________________________________________________________
consensus TATAGCAGCGCAAGATTCGGGTCTTGTTACACTGATACCAGCATTATACTTTGATAATTT
. : . : . : . : . : . :
rJMSF043P23- ACCAGAAGCAGTTTCGTAACCTGCTTCAGCACCAATAGCAAAGGTTGGAGTGCCAAGGGT
rJMSF049I13- ACCAGAAGCAGTTTCGTAACCTGCTTCAGCACCAATAGCAAAGGTTGGAGTGCCAAGGGT
JMFN002B09+ ACCAGAAGCAGTTTCGTAACCTGCTTCAGCACCAATAGCAAAGGTTGGAGTGCCAAGGGT
JMSF043P23+ ACCAGAAGCAGTTTCGTAACCTGCTTCAGCACCAATAGCAAAGGTTGGAGTGCCAAGGGT
JMSF045J07+ ACCAGAAGCAGTTTCGTAACCTGCTTCAGCACCAATAGCAAAGGTTGGAGTGCCAAGGGT
JMSF049I13+ ACCAGAAGCAGTTTCGTAACCTGCTTCAGCACCAATAGCAAAGGTTGGAGTGCCAAGGGT
____________________________________________________________
consensus ACCAGAAGCAGTTTCGTAACCTGCTTCAGCACCAATAGCAAAGGTTGGAGTGCCAAGGGT
. : . : . : . : . : . :
rJMSF043P23- AAGAGAAAGATCAATGATGGGTGAGTGATTGGGGGCAACAACAGCTGTTGTGAANGTTGC
rJMSF049I13- AAGAGAAAGATCAATGATGGGTGAGTGATTGGGGGCAACAACAGCTGTTGTGAAGGTTGC
JMFN002B09+ AAGAGAAAGATCAATGATGGGTGAGTGATTGGGGGCAACAACAGCTGTTGTGAAGGTTGC
JMSF043P23+ AAGAGAAAGATCAATGATGGGTGAGTGATTGGGGGCAACAACAGCTGTTGTGAAGGTTGC
JMSF045J07+ AAGAGAAAGATCAATGATGGGTGAGTGATTGGGGGCAACAACAGCTGTTGTGAAGGTTGC
JMSF049I13+ AAGAGAAAGATCAATGATGGGTGAGTGATTGGGGGCAACAACAGCTGTTGTGAAGGTTGC
____________________________________________________________
consensus AAGAGAAAGATCAATGATGGGTGAGTGATTGGGGGCAACAACAGCTGTTGTGAAGGTTGC
. : . : . : . : . : . :
rJMSF043P23- ATGGTGGTGGAGGTACTCAA
rJMSF049I13- ATGGTGGTGGAGGTACTCAAACTCCAG
JMFN002B09+ ATGGTGGTGGAGGTACTCAAACTCCAGCTTGACAGAATTATAATTAGGAAATTTCACAGA
JMSF043P23+ ATGGTGGTGGAGGTACTCAAACTCCAGCTTGACAGAATTATAATTAGGAAATTTCACAGA
JMSF045J07+ ATGGTGGTGGAGGTACTCAAACTCCAGCTTGACAGAATTATAATTAGGAAATTTCACAGA
JMSF049I13+ ATGGTGGTGGAGGTACTCAAACTCCAGCTTAACAGAATTATAATTAGGAAATTTCACAGA
____________________________________________________________
consensus ATGGTGGTGGAGGTACTCAAACTCCAGCTTGACAGAATTATAATTAGGAAATTTCACAGA
. : . : . : . : . : . :
JMFN002B09+ GGCAATGGTCTTCGATGATGGGACAATGTTGGTGAAAGTCAGAGTTGTAAAGATATTTGA
JMSF043P23+ GGCAATGGTCTTCGATGATGGGACAATGTTGGTGAAAGTCAGAGTTGTAAAGATATTTGA
JMSF045J07+ GGCAATGGTCTTCGATGATGGGACAATGTTGGTGAAAGTCAGAGTTGTAAAGATATTTGA
JMSF049I13+ GGCAATGGTCTTCGATGATGGGACAATGTTGGTGAAAGTCAGAGTTGTAAAGATATTTGA
____________________________________________________________
consensus GGCAATGGTCTTCGATGATGGGACAATGTTGGTGAAAGTCAGAGTTGTAAAGATATTTGA
. : . : . : . : . : . :
JMFN002B09+ TTCTGTATCAACTTTGACATCAACCGTAGTGTTCTTATATTTGTATTGCACTGCTACATC
JMSF043P23+ TTCTGTATCAACTTTGACATCAACCGTAGTGTTCTTATATTTGTATTGCACTGCTACATC
JMSF045J07+ TTCTGTATCAACTTTGACATCAACCGTAGTGTTCTTATATTTGTATTGCACTGCTACATC
JMSF049I13+ TTCTGTATCAACTTTGACATCAACCGTAGTGTTCTTATATTTGTATTGCACTGCTACATC
____________________________________________________________
consensus TTCTGTATCAACTTTGACATCAACCGTAGTGTTCTTATATTTGTATTGCACTGCTACATC
. : . : . : . : . : . :
JMFN002B09+ TCCAGTTGAAAGAGCTCCTTTCTTAACTGCAGTTGGTGTTATGGTCACTCCGCAGTCACT
JMSF043P23+ TCCAGTTGAAAGAGCTCCTTTCTTAACTGCAGTTGGTGTTATGGTCACTCCGCAGTCACT
JMSF045J07+ TCCAGTTGAAAGAGCTCCTTTCTTAACTGCAGTTGGTGTTATGGTCACTCCGCAGTCACT
JMSF049I13+ TCCAGTTGAAAGAGCTCCTTTCTTAACTGCAGTTGGTGTTATGGTCACTCCGCAGTCACT
____________________________________________________________
consensus TCCAGTTGAAAGAGCTCCTTTCTTAACTGCAGTTGGTGTTATGGTCACTCCGCAGTCACT
. : . : . : . : . : . :
JMFN002B09+ GTGGGTCGACACAGATATCTTCTGATCCGAGATATAGTCCTTCGTCAGCAGATCTTTGGC
JMSF043P23+ GTGGGTCGACACAGATATCTTCTGATCCGAGATATAGTCCTTCGTCAGCAGATCTTTGGC
JMSF045J07+ GTGGGTCGACACAGATATCTTCTGATCCGAGATATAGTCCTTCGTCAGCAGATCTTTGGC
JMSF049I13+ GTGGGTCGACACAGATATCTTCTGATCCGAGATATAGTCCTTCGTCAGCAGATCTTTGGC
____________________________________________________________
consensus GTGGGTCGACACAGATATCTTCTGATCCGAGATATAGTCCTTCGTCAGCAGATCTTTGGC
. : . : . : . : . : . :
JMFN002B09+ TTTCTTGCCAATACCGGAGAAGAGACCAGGTCCGGTAGTCATTTTGTCTCAGGCCGATGA
JMSF043P23+ TTTCTTGCCAATACCGGAGAAGAGACCAGGTCCGGTAGTCATTTTGTCTCAGGCCGATGA
JMSF045J07+ TTTCTTGCCAATACCGGAGAAGAGACCAGGTCCGGTAGTCATTTTGTCTCAGGCCGATGA
JMSF049I13+ TTTCTTGCCAATACCGGAGAAGAGACCAGGTCCGGTAGTCATTTTGTCTCAGGCCGATGA
____________________________________________________________
consensus TTTCTTGCCAATACCGGAGAAGAGACCAGGTCCGGTAGTCATTTTGTCTCAGGCCGATGA
. : . : . : . : . : . :
JMFN002B09+ GATCACCAGAGATGGAGAGTATTGAAGAGAATCGGGAAGGCGGAACTCTGAA
JMSF043P23+ GATCACCAGAGATGGAGAGTATTGCAGAGAATCGGGAAGGCGGAACTCTGAATCTGGAAA
JMSF045J07+ GATCACCAGAGATGGAGAGTATTGCAGAGAATCGGGAAGGCGGAACTCTGAATCTGGAAA
JMSF049I13+ GATCACCAGAGATGGAGAGTATTGCAGAGAATCGGGAAGGCGGAACTCTGAATCTGGAAA
____________________________________________________________
consensus GATCACCAGAGATGGAGAGTATTGCAGAGAATCGGGAAGGCGGAACTCTGAATCTGGAAA
. : . : . : . : . : . :
JMSF043P23+ CCGAG
JMSF045J07+ CCGAGAAGGAGGAAGA
JMSF049I13+ CCGAGAAGGAGGAAGACAGCTCCAAAAGAGAAATTCGTTTTTATTGTTACCATTATCATC
____________________________________________________________
consensus CCGAGAAGGAGGAAGACAGCTCCAAAAGAGAAATTCGTTTTTATTGTTACCATTATCATC