Contig 000980:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF006M22Sequence275000980 (2)324011429 (2)
JMSF048P15Sequence665000980 (2)387011429 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF006M22+ CTCAT
JMSF048P15+ CTCAT
                      ____________________________________________________________
consensus CTCAT
 
. : . : . : . : . : . :
JMSF006M22+ TATTATTCACCTCCTCTTCTTGGCCGCCATGGTTCCCACCCTCACTAGGGTTCTGACTCT
JMSF048P15+ TATTATTCACCTCCTCTTCTTGGCCGCCATGGTTCCCACCCTCACTAGGGTTCTGACTCT
                      ____________________________________________________________
consensus TATTATTCACCTCCTCTTCTTGGCCGCCATGGTTCCCACCCTCACTAGGGTTCTGACTCT
 
. : . : . : . : . : . :
JMSF006M22+ GACTCCCACTACTGTTCGTCGTGGTCGTGGTGGCGCCGCCATCGCCGCCGCCGCCGCCGC
JMSF048P15+ GACTCCCACTACTGTTCGTCGTGGTCGTGGTGGCGCCGCCATCGCCGCCGCCGCCGCCGC
                      ____________________________________________________________
consensus GACTCCCACTACTGTTCGTCGTGGTCGTGGTGGCGCCGCCATCGCCGCCGCCGCCGCCGC
 
. : . : . : . : . : . :
JMSF006M22+ CGATAAATTCCGGCTCCCTCCTCAACCCAAGATGGCTTTTCATCTCCATTTGATTCATAG
JMSF048P15+ CGATAAATTCCGGCTCCCTCCTCAACCCAAGATGGCTTTTCATCTCCATTTGATTCATAG
                      ____________________________________________________________
consensus CGATAAATTCCGGCTCCCTCCTCAACCCAAGATGGCTTTTCATCTCCATTTGATTCATAG
 
. : . : . : . : . : . :
JMSF006M22+ CTAGAGTCCCAGTCCACCACCTATTCGCCATAGCCTTCACCACAAATCTAATCTCTACAC
JMSF048P15+ CTAGAGTCCCAGTCCACCACCTATTCGCCATAGCCTTCACCACAAATCTAATCTCTACAC
                      ____________________________________________________________
consensus CTAGAGTCCCAGTCCACCACCTATTCGCCATAGCCTTCACCACAAATCTAATCTCTACAC
 
. : . : . : . : . : . :
JMSF006M22+ CTCAGAATCTGATAACGCTACTGTACTGT
JMSF048P15+ CTCAGAATCTGATAACGCTACTGTACTGTACCCTTCTCTCTCCAAGATAATATAATATAT
                      ____________________________________________________________
consensus CTCAGAATCTGATAACGCTACTGTACTGTACCCTTCTCTCTCCAAGATAATATAATATAT
 
. : . : . : . : . : . :
JMSF048P15+ TCAATCGCCAGCCACTCTTCGTCTTCATGGAGTCATCTTCTTCGTTAGCTTGGCAGATTC
                      ____________________________________________________________
consensus TCAATCGCCAGCCACTCTTCGTCTTCATGGAGTCATCTTCTTCGTTAGCTTGGCAGATTC
 
. : . : . : . : . : . :
JMSF048P15+ GGTTGGTACGGGCTAGGGTTTAATGAGGATTGTACTGTACTTGAAGATTGCTTGATTCTT
                      ____________________________________________________________
consensus GGTTGGTACGGGCTAGGGTTTAATGAGGATTGTACTGTACTTGAAGATTGCTTGATTCTT
 
. : . : . : . : . : . :
JMSF048P15+ GAATTCTGTTTCTGAAGTTGAAGTACGATATGACGGTGAGATTCAGCCTGGCGTACGCTA
                      ____________________________________________________________
consensus GAATTCTGTTTCTGAAGTTGAAGTACGATATGACGGTGAGATTCAGCCTGGCGTACGCTA
 
. : . : . : . : . : . :
JMSF048P15+ AGCTAGGTAGAAAGGTGACAGCGAATGTTAGCGTGGGACGGTTTTGCAGAGAGTGTGGGT
                      ____________________________________________________________
consensus AGCTAGGTAGAAAGGTGACAGCGAATGTTAGCGTGGGACGGTTTTGCAGAGAGTGTGGGT
 
. : . : . : . : . : . :
JMSF048P15+ TTAGTTGTGTGCGCCACCGGCTCCCGGTGCCGGTGGATAACCTAGATTTCCACTGCCTTA
                      ____________________________________________________________
consensus TTAGTTGTGTGCGCCACCGGCTCCCGGTGCCGGTGGATAACCTAGATTTCCACTGCCTTA
 
. : . : . : . : . : . :
JMSF048P15+ ATTGGGGTTTTATCTTCTGCACTCGGTTTTTGTGCGTCTTTTCCACTGAAAGTCCAGACC
                      ____________________________________________________________
consensus ATTGGGGTTTTATCTTCTGCACTCGGTTTTTGTGCGTCTTTTCCACTGAAAGTCCAGACC