Contig 000973:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS029C05Sequence614000973 (3)ref|XP_009627858.1|7e-81PREDICTED: uncharacterized protein ycf45 [Nicotiana tomentosiformis]
JMSF018N09Sequence456000973 (3)ref|XP_009627858.1|4e-42PREDICTED: uncharacterized protein ycf45 [Nicotiana tomentosiformis]816011425 (2)ref|XP_006361691.1|7e-84PREDICTED: uncharacterized protein ycf45-like [Solanum tuberosum]
JMSF048H08Sequence712000973 (3)ref|XP_006361691.1|3e-99PREDICTED: uncharacterized protein ycf45-like [Solanum tuberosum]758011425 (2)ref|XP_006361691.1|1e-88PREDICTED: uncharacterized protein ycf45-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF048H08+                   TCTTGCCAACTCCTGGAGGCCCTATAACTAATATGGAACCTCCTCCTTCAAT
                      ____________________________________________________________
consensus                     TCTTGCCAACTCCTGGAGGCCCTATAACTAATATGGAACCTCCTCCTTCAAT
 
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JMFS029C05+                                       GATACAGCTCGACCAACTCGGCATGTAAGGCC
JMSF048H08+           CAAGTCCCGTATGATCTCAGCACTTCCTGATACAGCTCGACCAACTCGGCATGTAAGGCC
                      ____________________________________________________________
consensus             CAAGTCCCGTATGATCTCAGCACTTCCTGATACAGCTCGACCAACTCGGCATGTAAGGCC
 
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JMFS029C05+           AATGATTTGCAATTTACGGTTACGGATAGCACTTATACGATGCAGGGAGTTGTCAATACC
JMSF048H08+           AATGATTTGCAATTTACGGTTACGGATAGCACTTATACGATGCAGGGAGTTGTCAATACC
                      ____________________________________________________________
consensus             AATGATTTGCAATTTACGGTTACGGATAGCACTTATACGATGCAGGGAGTTGTCAATACC
 
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JMFS029C05+           CGAACGGTTGTCATCAGAGAAATCACCAACCTTTGAGATGGCATGACGTAGATCCTCAAG
JMSF048H08+           CGAACGGTTGTCATCAGAGAAATCACCAACCTTTGAGATGGCATGACGTAGATCCTCAAG
                      ____________________________________________________________
consensus             CGAACGGTTGTCATCAGAGAAATCACCAACCTTTGAGATGGCATGACGTAGATCCTCAAG
 
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JMFS029C05+           CTTCACAGGCTGATCCGAAACCACCCAATCTCCCGACGGAAACCGTGCAAGCGGCTTCCT
JMSF018N09+                                   CCAATCTCCCGACGGAAACCGTGCAAGCGGCTTCCT
JMSF048H08+           CTTCACAGGCTGATCCGAAACCACCCAATCTCCCGACGGAAACCGTGCAAGCGGCTTCCT
                      ____________________________________________________________
consensus             CTTCACAGGCTGATCCGAAACCACCCAATCTCCCGACGGAAACCGTGCAAGCGGCTTCCT
 
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JMFS029C05+           ACCCAAATCCATGACTATCTCAATTAACTCCCCGATTTCTTCATGCCTAACGAGCTCATT
JMSF018N09+           ACCCAAATCCATGACTATCTCAATTAACTCCCCGATTTCTTCATGCCTAACGAGCTCATT
JMSF048H08+           ACCCAAATCCATGACTATCTCAATTAACTCCCCGATTTCTTCATGCCTAACGAGCTCATT
                      ____________________________________________________________
consensus             ACCCAAATCCATGACTATCTCAATTAACTCCCCGATTTCTTCATGCCTAACGAGCTCATT
 
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JMFS029C05+           TCTCATCCTCGAGGGCACAATCTGAAGGAACAAGTCCATGTCCGAGACGGGCGCATCCGG
JMSF018N09+           TCTCATCCTCGAGGGCACAATCTGAAGGAACAAGTCCATGTCCGAGACGGGCGCATCCGG
JMSF048H08+           TCTCATCCTCGAGGGCACAATCTGAAGGAACAAGTCCATGTCCGAGACGGGCGCATCCGG
                      ____________________________________________________________
consensus             TCTCATCCTCGAGGGCACAATCTGAAGGAACAAGTCCATGTCCGAGACGGGCGCATCCGG
 
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JMFS029C05+           AGAACTCGACGTCGACGGCGAGCTCGTCGAAATCGACTTCAACCAATTCGCGCGGGTGGT
JMSF018N09+           AGAACTCGACGTCGACGGCGAGCTCGTCGAAATCGACTTCAACCAATTCGCGCGGGTGGT
JMSF048H08+           AGAACTCGACGTCGACGGCGAGCTCGTCGAAATCGACTTCAACCAATTCGCGCGGGTGGT
                      ____________________________________________________________
consensus             AGAACTCGACGTCGACGGCGAGCTCGTCGAAATCGACTTCAACCAATTCGCGCGGGTGGT
 
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JMFS029C05+           CCGGTCCCTCGGCCTCCTAATTTCCGGCGACTGAATCGACGACGAGATTGTGTTCCTGTT
JMSF018N09+           CCGGTCCCTCGGCCTCCTAATTTCCGGCGACTGAATCGACGACGAGATTGTGTTCCTGTT
JMSF048H08+           CCGGTCCCTCGGCCTCCTAATTTCCGGCGACTGAATCGACGACGAGATTGTGTTCCTGTT
                      ____________________________________________________________
consensus             CCGGTCCCTCGGCCTCCTAATTTCCGGCGACTGAATCGACGACGAGATTGTGTTCCTGTT
 
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JMFS029C05+           CCGCCCACCACATTTTCGACGGAATTCCGCAGAGAATGCGGAGGAGCCAGCCCGAGAGCT
JMSF018N09+           CCGCCCACCACATTTTCGACGGAATTCCGCAGAGAATGCGGAGGAGCCAGCCCGAGAGCT
JMSF048H08+           CCGCCCACCACATTTTCGACGGAATTCCGCAGAGAATGCGGAGGAGCCAGCCCGAGAGCT
                      ____________________________________________________________
consensus             CCGCCCACCACATTTTCGACGGAATTCCGCAGAGAATGCGGAGGAGCCAGCCCGAGAGCT
 
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JMFS029C05+           GTCCAGGTATGCAAAAGCTGAGATGGGTATTTGCTTAGCCGAGCTCCATGAGCTCTGAAC
JMSF018N09+           GTCCAGGTATGCAAAAGCTGAGATGGGTATTTGCTTAGCCGAGCTCCATGAGCTCTGAAC
JMSF048H08+           GTCCAGGTATGCAAAAGCTGAGATGGGTATTTGCTTAGCCGAGCTCCATGAGCTCTGAAC
                      ____________________________________________________________
consensus             GTCCAGGTATGCAAAAGCTGAGATGGGTATTTGCTTAGCCGAGCTCCATGAGCTCTGAAC
 
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JMFS029C05+           GTTAATCAAAACAAATTGCGAATTCAAAGCTCTCATATTATC                  
JMSF018N09+           GTTAATCAAAACAAATTGCGAATTCAAAGCTCTCATATTATCTGAACTTCTTCTCTT   
JMSF048H08+           GTTAATCAAAACAAATTGCGAATTCAAAGCTCTCATATTATCTGAACTTCTTCTCTTTCC
                      ____________________________________________________________
consensus             GTTAATCAAAACAAATTGCGAATTCAAAGCTCTCATATTATCTGAACTTCTTCTCTTTCC