| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001J19 | Sequence | 529 | 000970 (9) | sp|P19173.3|COX5C_IPOBA | 1e-35 | RecName: Full=Cytochrome c oxidase subunit 5C; AltName: Full=Cytochrome c oxida | 498 | 000970 (9) | sp|P19173.3|COX5C_IPOBA | 8e-36 | RecName: Full=Cytochrome c oxidase subunit 5C; AltName: Full=Cytochrome c oxida |
| JMFF013G03 | Sequence | 519 | 000970 (9) | sp|P19173.3|COX5C_IPOBA | 2e-35 | RecName: Full=Cytochrome c oxidase subunit 5C; AltName: Full=Cytochrome c oxida | 485 | 000970 (9) | sp|P19173.3|COX5C_IPOBA | 1e-35 | RecName: Full=Cytochrome c oxidase subunit 5C; AltName: Full=Cytochrome c oxida |
| JMFS146A09 | Sequence | 482 | 000970 (9) | sp|P19173.3|COX5C_IPOBA | 1e-35 | RecName: Full=Cytochrome c oxidase subunit 5C; AltName: Full=Cytochrome c oxida | |||||
| JMSF040A24 | Sequence | 515 | 000970 (9) | sp|P19173.3|COX5C_IPOBA | 2e-35 | RecName: Full=Cytochrome c oxidase subunit 5C; AltName: Full=Cytochrome c oxida | 463 | 000970 (9) | sp|P19173.3|COX5C_IPOBA | 9e-36 | RecName: Full=Cytochrome c oxidase subunit 5C; AltName: Full=Cytochrome c oxida |
| JMSF048D04 | Sequence | 698 | 000970 (9) | 732 | 000970 (9) | sp|P19173.3|COX5C_IPOBA | 2e-34 | RecName: Full=Cytochrome c oxidase subunit 5C; AltName: Full=Cytochrome c oxida | |||
This contig is upended
. : . : . : . : . : . :
JMFF013G03+ TTT
____________________________________________________________
consensus TTT
. : . : . : . : . : . :
JMFF013G03+ TTTTTTTAAATGGTGGTAATGAAAAGCAAGTATATTAACCATGATAAATGTCAAAAATGA
rJMFF001J19- TGATAAATGTCAAAAATGA
JMFF001J19+ TGAAAAGCAAGTATATTAACCATGATAAATGTCAAAAATGA
JMSF040A24+ TGGTGGTAATGAAAAGCAAGTATATTAACCATGATAAATGTCAAAAATGA
rJMSF040A24- AAAATGA
JMFS146A09+ AACCATGATAAATGTCAAAAATGA
rJMFF013G03- ATATTAACCATGATAAATGTCAAAAATGA
____________________________________________________________
consensus TTTTTTTAAATGGTGGTAATGAAAAGCAAGTATATTAACCATGATAAATGTCAAAAATGA
. : . : . : . : . : . :
JMFF013G03+ TCCATTATTTGAACAACAGTTATCCCAAGAAAACCTAAAGAGTTACTCTAGAAAGCTGTG
rJMFF001J19- TCCATTATTTGAACAACAGTTATCCCAAGAAAACCTAAAGAGTTACTCTAGAAAGCTGTG
JMFF001J19+ TCCATTATTTGAACAACAGTTATCCCAAGAAAACCTAAAGAGTTACTCTAGAAAGCTGTG
JMSF040A24+ TCCATTATTTGAACAACAGTTATCCCAAGAAAACCTAAAGAGTTACTCTAGAAAGCTGTG
rJMSF040A24- TCCATTATTTGAACAACAGTTATCCCAAGAAAACCTAAAGAGTTACTCTAGAAAGCTGTG
JMFS146A09+ TCCATTATTTGAACAACAGTTATCCCAAGAAAACCTAAAGAGTTACTCTAGAAAGCTGTG
rJMFF013G03- TCCATTATTTGAACAACAGTTATCCCAAGAAAACCTAAAGAGTTACTCTAGAAAGCTGTG
rJMSF048D04- GTTATCCCAAGAAAACCTAAAGAGTTACTCTAGAAAGCTGTG
____________________________________________________________
consensus TCCATTATTTGAACAACAGTTATCCCAAGAAAACCTAAAGAGTTACTCTAGAAAGCTGTG
. : . : . : . : . : . :
JMFF013G03+ CAATTCTAGGGGCAACTTTTTGGCTTCCCTTAAGGCAACACAAAGTGTATCAAGAAAAAT
rJMFF001J19- CAATTCTAGGGGCAACTTTTTGGCTTCCCTTAAGGCAACACAAAGTGTATCAAGAAAAAT
JMFF001J19+ CAATTCTAGGGGCAACTTTTTGGCTTCCCTTAAGGCAACACAAAGTGTATCAAGAAAAAT
JMSF040A24+ CAATTCTAGGGGCAACTTTTTGGCTTCCCTTAAGGCAACACAAAGTGTATCAAGAAAAAT
rJMSF040A24- CAATTCTAGGGGCAACTTTTTGGCTTCCCTTAAGGCAACACAAAGTGTATCAAGAAAAAT
JMFS146A09+ CAATTCTAGGGGCAACTTTTTGGCTTCCCTTAAGGCAACACAAAGTGTATCAAGAAAAAT
rJMFF013G03- CAATTCTAGGGGCAACTTTTTGGCTTCCCTTAAGGCAACACAAAGTGTATCAAGAAAAAT
rJMSF048D04- CAATTCTAGGGGCAACTTTTTGGCTTCCCTTAAGGCAACACAAAGTGTATCAAGAAAAAT
____________________________________________________________
consensus CAATTCTAGGGGCAACTTTTTGGCTTCCCTTAAGGCAACACAAAGTGTATCAAGAAAAAT
. : . : . : . : . : . :
JMFF013G03+ GCAGTCTTCCAGGGTTCATTCACTATGATAGTGACTTCCATACAACAGCAAAGAAATATG
rJMFF001J19- GCAGTCTTCCAGGGTTCATTCACTATGATAGTGACTTCCATACAACAGCAAAGAAATATG
JMFF001J19+ GCAGTCTTCCAGGGTTCATTCACTATGATAGTGACTTCCATACAACAGCAAAGAAATATG
JMSF040A24+ GCAGTCTTCCAGGGTTCATTCACTATGATAGTGACTTCCATACAACAGCAAAGAAATATG
rJMSF040A24- GCAGTCTTCCAGGGTTCATTCACTATGATAGTGACTTCCATACAACAGCAAAGAAATATG
JMFS146A09+ GCAGTCTTCCAGGGTTCATTCACTATGATAGTGACTTCCATACAACAGCAAAGAAATATG
rJMFF013G03- GCAGTCTTCCAGGGTTCATTCACTATGATAGTGACTTCCATACAACAGCAAAGAAATATG
rJMSF048D04- GCAGTCTTCCAGGGTTCATTCACTATGATAGTGACTTCCATACAACAGCAAAGAAATATG
____________________________________________________________
consensus GCAGTCTTCCAGGGTTCATTCACTATGATAGTGACTTCCATACAACAGCAAAGAAATATG
. : . : . : . : . : . :
JMFF013G03+ TAAATGAAGTCTATTCTTCATCTGCAACAACACTGATCTGACCCTTCTCGAGCATGTCAT
rJMFF001J19- TAAATGAAGTCTATTCTTCATCTGCAACAACACTGATCTGACCCTTCTCGAGCATGTCAT
JMFF001J19+ TAAATGAAGTCTATTCTTCATCTGCAACAACACTGATCTGACCCTTCTCGAGCATGTCAT
JMSF040A24+ TAAATGAAGTCTATTCTTCATCTGCAACAACACTGATCTGACCCTTCTCGAGCATGTCAT
rJMSF040A24- TAAATGAAGTCTATTCTTCATCTGCAACAACACTGATCTGACCCTTCTCGAGCATGTCAT
JMFS146A09+ TAAATGAAGTCTATTCTTCATCTGCAACAACACTGATCTGACCCTTCTCGAGCATGTCAT
rJMFF013G03- TAAATGAAGTCTATTCTTCATCTGCAACAACACTGATCTGACCCTTCTCGAGCATGTCAT
rJMSF048D04- TAAATGAAGTCTATTCTTCATCTGCAACAACACTGATCTGACCCTTCTCGAGCATGTCAT
____________________________________________________________
consensus TAAATGAAGTCTATTCTTCATCTGCAACAACACTGATCTGACCCTTCTCGAGCATGTCAT
. : . : . : . : . : . :
JMFF013G03+ AGAATTCTTTCATTCTCCTCTGGCTGTTCCAGTGGTGCATTTTCCAGAAGCCACCAGCTA
rJMFF001J19- AGAATTCTTTCATTCTCCTCTGGCTGTTCCAGTGGTGCATTTTCCAGAAGCCACCAGCTA
JMFF001J19+ AGAATTCTTTCATTCTCCTCTGGCTGTTCCAGTGGTGCATTTTCCAGAAGCCACCAGCTA
JMSF040A24+ AGAATTCTTTCATTCTCCTCTGGCTGTTCCAGTGGTGCATTTTCCAGAAGCCACCAGCTA
rJMSF040A24- AGAATTCTTTCATTCTCCTCTGGCTGTTCCAGTGGTGCATTTTCCAGAAGCCACCAGCTA
JMFS146A09+ AGAATTCTTTCATTCTCCTCTGGCTGTTCCAGTGGTGCATTTTCCAGAAGCCACCAGCTA
rJMFF013G03- AGAATTCTTTCATTCTCCTCTGGCTGTTCCAGTGGTGCATTTTCCAGAAGCCACCAGCTA
rJMSF048D04- AGAATTCTTTCATTCTCCTCTGGCTGTTCCAGTGGTGCATTTTCCAGAAGCCACCAGCTA
____________________________________________________________
consensus AGAATTCTTTCATTCTCCTCTGGCTGTTCCAGTGGTGCATTTTCCAGAAGCCACCAGCTA
. : . : . : . : . : . :
JMFF013G03+ TGAGTCCAAGGCTAAAACCAATAACAAGCTCTTTGACAACACTTGGACCCTTGTATACCA
rJMFF001J19- TGAGTCCAAGGCTAAAACCAATAACAAGCTCTTTGACAACACTTGGACCCTTGTATACCA
JMFF001J19+ TGAGTCCAAGGCTAAAACCAATAACAAGCTCTTTGACAACACTTGGACCCTTGTATACCA
JMSF040A24+ TGAGTCCAAGGCTAAAACCAATAACAAGCTCTTTGACAACACTTGGACCCTTGTATACCA
rJMSF040A24- TGAGTCCAAGGCTAAAACCAATAACAAGCTCTTTGACAACACTTGGACCCTTGTATACCA
JMFS146A09+ TGAGTCCAAGGCTAAAACCAATAACAAGCTCTTTGACAACACTTGGACCCTTGTATACCA
rJMFF013G03- TGAGTCCAAGGCTAAAACCAATAACAAGCTCTTTGACAACACTTGGACCCTTGTATACCA
rJMSF048D04- TGAGTCCAAGGCTAAAACCAATAACAAGCTCTTTGACAACACTTGGACCCTTGTATACCA
____________________________________________________________
consensus TGAGTCCAAGGCTAAAACCAATAACAAGCTCTTTGACAACACTTGGACCCTTGTATACCA
. : . : . : . : . : . :
JMFF013G03+ CATGTGCAACATGACCACCCGCCATTCTTGAGCAGAAGCACCAGAAAGCTGAGACGAGAG
rJMFF001J19- CATGTGCAACATGACCACCCGCCATTCTT
JMFF001J19+ CATGTGCAACATGACCACCCGCCATTCTT
JMSF040A24+ CATGTGCAACATGACCACCCGCCATTCTTGAGCAGAAGCACCAGAAAGCTGAGACGAGAG
rJMSF040A24- CATGTGCAACATGACCACCCGCCATTCTTGAGCAGAAGCACCAGAAAGCTGAGACGAGAG
JMFS146A09+ CATGTGCAACATGACCACCCGCCATTCTTGAGCAGAAGCACCAGAAAGCTGAGACGAGAG
rJMFF013G03- CATGTGCAACATGACCACCCGCCATTCTTGAGCAGAAGCACCAGAAAGCTGAGACGAGAG
rJMSF048D04- CATGTGCAACATGACCACCCGCCATTCTTCTG-AGGGTTACAAAATAGAACTTGTTAAAA
____________________________________________________________
consensus CATGTGCAACATGACCACCCGCCATTCTTGAGCAGAAGCACCAGAAAGCTGAGACGAGAG
. : . : . : . : . : . :
JMFF013G03+ AGAAAGAGATCCGCTTGAGAAGGTAAAGGCGATTTC
JMSF040A24+ AGAAAGAGATCCGCTTGAGAAGGTAAAGGCGATTTC
rJMSF040A24- AGAAAGAGATCCGCTTGAGAAGGTAAAGGCGATTTC
JMFS146A09+ AGAAAGAGATCCGCTT
rJMFF013G03- AGAAAGAGATCCGCTTGAGAAGGTAAAGGCGATTTC
rJMSF048D04- AAAAAATACTCCGTAACAACATGCAATTTTGAATAACATTGAAGTTCTAAGCATTCAGAA
____________________________________________________________
consensus AGAAAGAGATCCGCTTGAGAAGGTAAAGGCGATTTCCATTGAAGTTCTAAGCATTCAGAA
. : . : . : . : . : . :
rJMSF048D04- CAGCATCATTAAAACAGTAAAATTACTCACCAATAGCAACAGCGTACACATGAAACACGT
____________________________________________________________
consensus CAGCATCATTAAAACAGTAAAATTACTCACCAATAGCAACAGCGTACACATGAAACACGT
. : . : . : . : . : . :
rJMSF048D04- CACGACATGACTATATTACTCTATAATAGAAAGTGCTGCATATATTGCTCTATGATAGAA
JMSF048D04+ ATAATAGAAAGTGCTGCATATATTGCTCTATGATAGAA
____________________________________________________________
consensus CACGACATGACTATATTACTCTATAATAGAAAGTGCTGCATATATTGCTCTATGATAGAA
. : . : . : . : . : . :
rJMSF048D04- AGTGAATATTATATTACTCTATAATAGAAAGTGATGCATATATTACTCTATAATATTAAG
JMSF048D04+ AGTGAATATTATATTACTCTATAATAGAAAGTGATGCATATATTACTCTATAATATTAAG
____________________________________________________________
consensus AGTGAATATTATATTACTCTATAATAGAAAGTGATGCATATATTACTCTATAATATTAAG
. : . : . : . : . : . :
rJMSF048D04- TGATCTATATATTGTTCCATAATATCAAGCATGAGCTATTGAAGCAGTATGAACCAAAAA
JMSF048D04+ TGATCTATATATTGTTCCATAATATCAAGCATGAGCTATTGAAGCAGTATGAACCAAAAA
____________________________________________________________
consensus TGATCTATATATTGTTCCATAATATCAAGCATGAGCTATTGAAGCAGTATGAACCAAAAA
. : . : . : . : . : . :
rJMSF048D04- TCTGTTATGGATAACCCATTACCA
JMSF048D04+ TCTGTTATGGATAACCCATTACCAATGGATGTGGGGAAAAATGACACTTATTTTCAATTA
____________________________________________________________
consensus TCTGTTATGGATAACCCATTACCAATGGATGTGGGGAAAAATGACACTTATTTTCAATTA
. : . : . : . : . : . :
JMSF048D04+ ACAGAGACTCGCCAACACAAAATTTAGAGGTCTCATCACTACAAAACATAGGGCAATCTG
____________________________________________________________
consensus ACAGAGACTCGCCAACACAAAATTTAGAGGTCTCATCACTACAAAACATAGGGCAATCTG
. : . : . : . : . : . :
JMSF048D04+ AACAAAGATCCTAAAAGCACATCCCATTATGCAATCAGTCGGAATAGATCCGATCTTTAA
____________________________________________________________
consensus AACAAAGATCCTAAAAGCACATCCCATTATGCAATCAGTCGGAATAGATCCGATCTTTAA
. : . : . : . : . : . :
JMSF048D04+ TATAACCCAATTAATTGTTCAGCATATTACACGTAAATTAACAAAAACAAAGGCAATTCG
____________________________________________________________
consensus TATAACCCAATTAATTGTTCAGCATATTACACGTAAATTAACAAAAACAAAGGCAATTCG
. : . : . : . : . : . :
JMSF048D04+ AGTAATCCAAGTATAGCTTCATCCTAAATATGTTATCCAGCACTAATCTAGCAGCTTAGC
____________________________________________________________
consensus AGTAATCCAAGTATAGCTTCATCCTAAATATGTTATCCAGCACTAATCTAGCAGCTTAGC
. : . : . : . : . : . :
JMSF048D04+ ATCGATTTAGGCAAAGTCGTAAGAAGAAAAGAGGAAGTCAAACAAATCCAATATTCAAAC
____________________________________________________________
consensus ATCGATTTAGGCAAAGTCGTAAGAAGAAAAGAGGAAGTCAAACAAATCCAATATTCAAAC
. : . : . : . : . : . :
JMSF048D04+ ATACGACCCTAATTTTTTTCGCCTGTATTCAAGTCTCAACATTAATTTTTATGCTCAAAT
____________________________________________________________
consensus ATACGACCCTAATTTTTTTCGCCTGTATTCAAGTCTCAACATTAATTTTTATGCTCAAAT
. : . : . : . : . : . :
JMSF048D04+ AAATAAATAACAAAACAGAAACGTGAGATTCAAAGCAAGGGATCCGGGATTGACTTACGA
____________________________________________________________
consensus AAATAAATAACAAAACAGAAACGTGAGATTCAAAGCAAGGGATCCGGGATTGACTTACGA
. : . : . : . : . : . :
JMSF048D04+ GCAGAAGCACCAGAAAGCTGAGACGAGAGAGAAAGAGATCCGCTTGAGAAGGTAAAGGCC
____________________________________________________________
consensus GCAGAAGCACCAGAAAGCTGAGACGAGAGAGAAAGAGATCCGCTTGAGAAGGTAAAGGCC