Contig 000969:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027L12Sequence566000969 (2)ref|XP_009763337.1|4e-115PREDICTED: GDP-mannose 3,5-epimerase 1 [Nicotiana sylvestris]718005544 (3)gb|KDO48921.1|3e-95hypothetical protein CISIN_1g017216mg [Citrus sinensis]
JMSF047P21Sequence651000969 (2)gb|ACU16974.1|2e-116unknown [Glycine max]753005544 (3)gb|KCW85270.1|6e-111hypothetical protein EUGRSUZ_B02118 [Eucalyptus grandis]

Alignment

This contig is upended


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JMFF027L12+                                         GCTCAGCAGGCCACGCATCACATTCCTTAA
JMSF047P21+                    CTAAACCATACGCATCTTGAGGCTCAGCAGGCCACGCATCACATTCCTTAA
                      ____________________________________________________________
consensus                      CTAAACCATACGCATCTTGAGGCTCAGCAGGCCACGCATCACATTCCTTAA
 
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JMFF027L12+           GGCTCACGTTGGTCTCTAATTGCTTGAATTCAGGGTAAATGCAAGCACTAGAGGCATAGA
JMSF047P21+           GGCTCACGTTGGTCTCTAATTGCTTGAATTCAGGGTAAATGCAAGCACTAGAGGCATAGA
                      ____________________________________________________________
consensus             GGCTCACGTTGGTCTCTAATTGCTTGAATTCAGGGTAAATGCAAGCACTAGAGGCATAGA
 
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JMFF027L12+           AGAACCTTTTAACGCCATTAATCCTGGAAGCCTCCATCATGTTGAAGCTAATCATGGTAT
JMSF047P21+           AGAACCTTTTAACGCCATTAATCCTGGAAGCCTCCATCATGTTGAAGCTAATCATGGTAT
                      ____________________________________________________________
consensus             AGAACCTTTTAACGCCATTAATCCTGGAAGCCTCCATCATGTTGAAGCTAATCATGGTAT
 
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JMFF027L12+           TATTATACATAATAACCGAGTGATTGGACTGAATGAACCCCATCCCACCCATATCGGCAG
JMSF047P21+           TATTATACATAATAACCGAGTGATTGGACTGAATGAACCCCATTCCACCCATATCGGCAG
                      ____________________________________________________________
consensus             TATTATACATAATAACCGAGTGATTGGACTGAATGAACCCCATTCCACCCATATCGGCAG
 
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JMFF027L12+           CAAGATTAAAGACGTGGTCCACTCCCTTGGTGACCTTCAAACAATTGTCCATAACCCGGA
JMSF047P21+           CAAGATTAAAGACGTGGTCCACTCCCTTGGTGACCTTCAAACAATTGTCCATAACCCGGA
                      ____________________________________________________________
consensus             CAAGATTAAAGACGTGGTCCACTCCCTTGGTGACCTTCAAACAATTGTCCATAACCCGGA
 
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JMFF027L12+           GATCGACTAGATGAAACTCATGGCAAAACATATCCTCGGTCATATGTTCATTCTTCTTCC
JMSF047P21+           GATCGACTAGATGAAACTCATGGCAAAACATATCCTCGGTCATATGTTCATTCTTCTTCC
                      ____________________________________________________________
consensus             GATCGACTAGATGAAACTCATGGCAAAACATATCCTCGGTCATATGTTCATTCTTCTTCC
 
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JMFF027L12+           AGTCCGAAGCAATAACGTAGTGGCCCTCACTCTTCAGGCGCCGAGCAATGTGAGAAGCAA
JMSF047P21+           AGTCCGAAGCAATAACGTAGTGGCCCTCACTCTTCAGGCGCCGAGCAATGTGAGAAGCAA
                      ____________________________________________________________
consensus             AGTCCGAAGCAATAACGTAGTGGCCCTCACTCTTCAGGCGCCGAGCAATGTGAGAAGCAA
 
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JMFF027L12+           TAAAGCCTCCCGCTCCGGTTATGGAGATACGAAGCTTCTCAGCGGGCCAGTAAGGCTCCC
JMSF047P21+           TAAAGCCTCCCGCTCCGGTTATGGAGATACGAAGCTTCTCAGCGGGCCAGTAAGGCTCCC
                      ____________________________________________________________
consensus             TAAAGCCTCCCGCTCCGGTTATGGAGATACGAAGCTTCTCAGCGGGCCAGTAAGGCTCCC
 
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JMFF027L12+           TCTCAAGGTTTTCATAGGTGTAAGCACCATAA                            
JMSF047P21+           TCTCAAGGTTTTCATAGGTGTAAGCACCATAACTGATCCCTCCTGAGCTTCCCATTCTAG
                      ____________________________________________________________
consensus             TCTCAAGGTTTTCATAGGTGTAAGCACCATAACTGATCCCTCCTGAGCTTCCCATTCTAG
 
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JMSF047P21+           AAAGTCCAAGAAGATGGAGAGAGAACAGAAGAGCTAGGAATAGATAACAGAATCTTGGTA
                      ____________________________________________________________
consensus             AAAGTCCAAGAAGATGGAGAGAGAACAGAAGAGCTAGGAATAGATAACAGAATCTTGGTA
 
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JMSF047P21+           GCGCCGGTTGGATTTGGATAGTATCTTTTTGAAGAGTATTTCACAGTGAAGATGACAGCC
                      ____________________________________________________________
consensus             GCGCCGGTTGGATTTGGATAGTATCTTTTTGAAGAGTATTTCACAGTGAAGATGACAGCC