Contig 000968:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002P03Sequence296000968 (6)gb|KCW54638.1|2e-19hypothetical protein EUGRSUZ_I00580 [Eucalyptus grandis]692003421 (8)ref|XP_009776303.1|4e-81PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Nicotiana sylve
JMSF006L12Sequence365000968 (6)gb|ACJ85724.1|2e-35unknown [Medicago truncatula]
JMSF041O24Sequence800000968 (6)gb|KCW54638.1|9e-145hypothetical protein EUGRSUZ_I00580 [Eucalyptus grandis]747003421 (8)ref|XP_009776303.1|2e-103PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Nicotiana sylve
JMSF042O11Sequence718000968 (6)gb|KCW54638.1|1e-128hypothetical protein EUGRSUZ_I00580 [Eucalyptus grandis]495003421 (8)ref|XP_009776303.1|1e-25PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Nicotiana sylve
JMSF045P02Sequence746000968 (6)gb|KCW54638.1|1e-125hypothetical protein EUGRSUZ_I00580 [Eucalyptus grandis]698003421 (8)ref|XP_009597687.1|2e-55PREDICTED: serine hydroxymethyltransferase, mitochondrial isoform X2 [Nicotiana
JMSF047O08Sequence668000968 (6)gb|KCW54638.1|3e-101hypothetical protein EUGRSUZ_I00580 [Eucalyptus grandis]766003421 (8)ref|XP_009776303.1|5e-101PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Nicotiana sylve

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF041O24+ TGATGCGGTCATAATCATAGAGACGCGCATAAGCACTAGCTCCAGCAACAATTAGCTTT
                      ____________________________________________________________
consensus TGATGCGGTCATAATCATAGAGACGCGCATAAGCACTAGCTCCAGCAACAATTAGCTTT
 
. : . : . : . : . : . :
JMSF042O11+ TTTTCTCAAGCTGGTCATAGTCGATATAGCCAGTGCTCTCA
JMSF041O24+ GGCCTAAAAAGCGTCGCACTTTTCTCAAGCTGGTCATAGTCGATATAGCCAGTGCTCTCA
JMSF045P02+ TTTTCTCAAGCTGGTCATAGTCGATATAGCCAGTGCTCTCA
                      ____________________________________________________________
consensus GGCCTAAAAAGCGTCGCACTTTTCTCAAGCTGGTCATAGTCGATATAGCCAGTGCTCTCA
 
. : . : . : . : . : . :
JMSF042O11+ TTCAATCTATAGGGCATTGTCTCAAAAAAGATGGAAACTGCTGATATCTTCTTTGTGTCA
JMSF041O24+ TTCAATCTATAGGGCATTGTCTCAAAAAAGATGGAAACTGCTGATATCTTCTTTGTGTCA
JMSF045P02+ TTCAATCTATAGGGCATTGTCTCAAAAAAGATGGAAACTGCTGATATCTTCTTTGTGTCA
JMSF047O08+ TTGTGTCA
                      ____________________________________________________________
consensus TTCAATCTATAGGGCATTGTCTCAAAAAAGATGGAAACTGCTGATATCTTCTTTGTGTCA
 
. : . : . : . : . : . :
JMSF042O11+ GTCTGATATCCATGGGAGAGATGCCCACCATGAGGAAGATCAAGTGCCATGATTCTGTCA
JMSF041O24+ GTCTGATATCCATGGGAGAGATGCCCACCATGAGGAAGATCAAGTGCCATGATTCTGTCA
JMSF045P02+ GTCTGATATCCATGGGAGAGATGCCCACCATGAGGAAGATCAAGTGCCATGATTCTGTCA
JMSF047O08+ GTCTGATATCCATGGGAGAGATGCCCACCATGAGGAAGATCAAGTGCCATGATTCTGTCA
                      ____________________________________________________________
consensus GTCTGATATCCATGGGAGAGATGCCCACCATGAGGAAGATCAAGTGCCATGATTCTGTCA
 
. : . : . : . : . : . :
JMSF042O11+ TGAGGTTTTAATAATGCAGTGTAAACCTGAAAATTGGATGGTGATCCCGATAAAGGCTGC
JMSF041O24+ TGAGGTTTTAATAATGCAGTGTAAACCTGAAAATTGGATGGTGATCCCGATAAAGGCTGC
JMSF045P02+ TGAGGTTTTAATAATGCAGTGTAAACCTGAAAATTGGATGGTGATCCCGATAAAGGCTGC
JMSF047O08+ TGAGGTTTTAATAATGCAGTGTAAACCTGAAAATTGGATGGTGATCCCGATAAAGGCTGC
                      ____________________________________________________________
consensus TGAGGTTTTAATAATGCAGTGTAAACCTGAAAATTGGATGGTGATCCCGATAAAGGCTGC
 
. : . : . : . : . : . :
JMSF042O11+ ACATTCACTCCCCATTTTGCAGGGTCAAGGCGGAACGCTTCCAAAGCGCGTTTTTGGCAC
JMSF041O24+ ACATTCACTCCCCATTTTGCAGGGTCAAGGCGGAACGCTTCCAAAGCGCGTTTTTGGCAC
JMSF045P02+ ACATTCACTCCCCATTTTGCAGGGTCAAGGCGGAACGCTTCCAAAGCGCGTTTTTGGCAC
JMSF047O08+ ACATTCACTCCCCATTTTGCAGGGTCAAGGCGGAACGCTTCCAAAGCGCGTTTTTGGCAC
                      ____________________________________________________________
consensus ACATTCACTCCCCATTTTGCAGGGTCAAGGCGGAACGCTTCCAAAGCGCGTTTTTGGCAC
 
. : . : . : . : . : . :
JMSF042O11+ AAGGATTCTGCCATATCAATGTACTCATTTCCTCCATAGTATCTGGCACCAGGATATCCT
JMSF041O24+ AAGGATTCTGCCATATCAATGTACTCATTTCCTCCATAGTATCTGGCACCAGGATATCCT
JMSF045P02+ AAGGATTCTGCCATATCAATGTACTCATTTCCTCCATAGTATCTGGCACCAGGATATCCT
JMSF047O08+ AAGGATTCTGCCATATCAATGTACTCATTTCCTCCATAGTATCTGGCACCAGGATATCCT
                      ____________________________________________________________
consensus AAGGATTCTGCCATATCAATGTACTCATTTCCTCCATAGTATCTGGCACCAGGATATCCT
 
. : . : . : . : . : . :
JMSF042O11+ TCACTGTATTTATTTGTCATAACAGAGCCAACTGCTTGCATCACAGATAAAGAAGTGAAA
JMSF041O24+ TCACTGTATTTATTTGTCATAACAGAGCCAACTGCTTGCATCACAGATAAAGAAGTGAAA
JMSF045P02+ TCACTGTATTTATTTGTCATAACAGAGCCAACTGCTTGCATCACAGATAAAGAAGTGAAA
JMSF006L12+ GTATTTATTNGTCATAACAGAGCCAACTGCTTGCATCACAGATAAAGAAGTGAAA
JMSF047O08+ TCACTGTATTTATTTGTCATAACAGAGCCAACTGCTTGCATCACAGATAAAGAAGTGAAA
                      ____________________________________________________________
consensus TCACTGTATTTATTTGTCATAACAGAGCCAACTGCTTGCATCACAGATAAAGAAGTGAAA
 
. : . : . : . : . : . :
JMSF042O11+ TTTTCTGAGGGGATGAGTTCAAGCCCCTTCCATTGTCTAGCTTTCTCGAGCTCAATAATG
JMSF041O24+ TTTTCTGAGGGGATGAGTTCAAGCCCCTTCCATTGTCTAGCTTTCTCGAGCTCAATAATG
JMSF045P02+ TTTTCTGAGGGGATGAGTTCAAGCCCCTTCCATTGTCTAGCTTTCTCGAGCTCAATAATG
JMSF006L12+ TTTTCTGAGGGGATGAGTTCAAGCCCCTTCCATTGTCTAGCTTTCTCGAGCTCAATAATG
JMSF002P03+ GGATGAGTTCAAGCCCCTTCCATTGTCTAGCTTTCTCGAGCTCAATAATG
JMSF047O08+ TTTTCTGAGGGGATGAGTTCAAGCCCCTTCCATTGTCTAGCTTTCTCGAGCTCAATAATG
                      ____________________________________________________________
consensus TTTTCTGAGGGGATGAGTTCAAGCCCCTTCCATTGTCTAGCTTTCTCGAGCTCAATAATG
 
. : . : . : . : . : . :
JMSF042O11+ TCAGCAATCTCAGGATCAACCTCCTCTAATGAAGCATTCAGCTGCTTTGGCCAAGAGACT
JMSF041O24+ TCAGCAATCTCAGGATCAACCTCCTCTAATGAAGCATTCAGCTGCTTTGGCCAAGAGACT
JMSF045P02+ TCAGCAATCTCAGGATCAACCTCCTCTAATGAAGCATTCAGCTGCTTTGGCCAAGAGACT
JMSF006L12+ TCAGCAATCTCAGGATCAACCTCCTCTAATGAAGCATTCAGCTGCTTTGGCCAAGAGACT
JMSF002P03+ TCAGCAATCTCAGGATCAACCTCCTCTAATGAAGCATTCAGCTGCTTTGGCCAAGAGACT
JMSF047O08+ TCAGCAATCTCAGGATCAACCTCCTCTAATGAAGCATTCAGCTGCTTTGGCCAAGAGACT
                      ____________________________________________________________
consensus TCAGCAATCTCAGGATCAACCTCCTCTAATGAAGCATTCAGCTGCTTTGGCCAAGAGACT
 
. : . : . : . : . : . :
JMSF042O11+ TGACACTTTTCCTTCTCATAAACTGCTTCGCTGGATAAAGAAGACATGTAATAGAGAGAA
JMSF041O24+ TGACACTTTTCCTTCTCATAAACTGCTTCGCTGGATAAAGAAGACATGTAATAGAGAGAA
JMSF045P02+ TGACACTTTTCCTTCTCATAAACTGCTTCGCTGGATAAAGAAGACATGTAATAGAGAGAA
JMSF006L12+ TGACACTTTTCCTTCTCATAAACTGCTTCGCTGGATAAAGAAGACATGTAATAGAGAGAA
JMSF002P03+ TGACACTTTTCCTTCTCATAAACTGCTTCGCTGGATAAAGAAGACATGTAATAGAGAGAA
JMSF047O08+ TGACACTTTTCCTTCTCATAAACTGCTTCGCTGGATAAAGAAGACATGTAATAGAGAGAA
                      ____________________________________________________________
consensus TGACACTTTTCCTTCTCATAAACTGCTTCGCTGGATAAAGAAGACATGTAATAGAGAGAA
 
. : . : . : . : . : . :
JMSF042O11+ CCGCCGCCATTGTAGAGAGTCTTGATGGGTTTTTCAATGGAAGATGAGAGCCTCCGAAGC
JMSF041O24+ CCGCCGCCATTGTAGAGAGTCTTGATGGGTTTTTCAATGGAAGATGAGAGCCTCCGAAGC
JMSF045P02+ CCGCCGCCATTGTAGAGAGTCTTGATGGGTTTTTCAATGGAAGATGAGAGCCTCCGAAGC
JMSF006L12+ CCGCCGCCATTGTAGAGAGTCTTGATGGGTTTTTCAATGGAAGATGAGAGCCTCCGAAGC
JMSF002P03+ CCGCCGCCATTGTAGAGAGTCTTGATGGGTTTTTCAATGGAAGATGAGAGCCTCCGAAGC
JMSF047O08+ CCGCCGCCATTGTAGAGAGTCTTGATGGGTTTTTCAATGGAAGATGAGAGCCTCCGAAGC
                      ____________________________________________________________
consensus CCGCCGCCATTGTAGAGAGTCTTGATGGGTTTTTCAATGGAAGATGAGAGCCTCCGAAGC
 
. : . : . : . : . : . :
JMSF042O11+ GCCATGGCCATAGCCATCGCCATTAACAATATGGGTACACTACAGAAGCTAAGCTAGCAG
JMSF041O24+ GCCATGGCCATAGCCATCGCCATTAACAATATGGGTACACTACAGAAGCTAAGCTAGCAG
JMSF045P02+ GCCATGGCCATAGCCATCGCCATTAACAATATGGGTACACTACAGAAGCTAAGCTAGCAG
JMSF006L12+ GCCATGGCCATAGCCATCGCCATTAACAATATGGGTACACTACAGAAGCTAAGCTAGCAG
JMSF002P03+ GCCATGGCCATAGCCATCGCCATTAACAATATGGGTACACTACAGAAGCTAAGCTAGCAG
JMSF047O08+ GCCATGGCCATAGCCATCGCCATTAACAATATGGGTACACTACAGAAGCTAAGCTAGCAG
                      ____________________________________________________________
consensus GCCATGGCCATAGCCATCGCCATTAACAATATGGGTACACTACAGAAGCTAAGCTAGCAG
 
. : . : . : . : . : . :
JMSF042O11+ AGAGT
JMSF041O24+ AGAGTGAATCTGTTTGGTGT
JMSF045P02+ AGAGTGAATCTGTTTGGTGTAATTAGTGAGTGGG
JMSF006L12+ AGAG
JMSF002P03+ AGAGT
JMSF047O08+ AGAGTGAATCTGTTTGGTGTAATTAGTGAGTGGGTGTGTATGGGTAAGGAGGAATGGGTC
                      ____________________________________________________________
consensus AGAGTGAATCTGTTTGGTGTAATTAGTGAGTGGGTGTGTATGGGTAAGGAGGAATGGGTC