Contig 000966:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF020K03Sequence710000966 (2)ref|XP_006592769.1|8e-110PREDICTED: mRNA-decapping enzyme-like protein-like isoform X2 [Glycine max]414011423 (2)ref|XP_002273425.1|6e-11PREDICTED: mRNA-decapping enzyme-like protein isoform X2 [Vitis vinifera] emb|C
JMSF047K21Sequence709000966 (2)ref|XP_006592769.1|3e-109PREDICTED: mRNA-decapping enzyme-like protein-like isoform X2 [Glycine max]411011423 (2)ref|XP_002273425.1|6e-11PREDICTED: mRNA-decapping enzyme-like protein isoform X2 [Vitis vinifera] emb|C

Alignment

This contig is upended


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JMSF020K03+                     CACAAAGGAATGGTCATCAGGAACATCTCTGACATTAGTGGTGGTGGTTG
JMSF047K21+                      ACAAAGGAATGGTCATCAGGAACATCTCTGACATTAGTGGTGGTGGTTG
                      ____________________________________________________________
consensus                       CACAAAGGAATGGTCATCAGGAACATCTCTGACATTAGTGGTGGTGGTTG
 
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JMSF020K03+           TTGATGGCTCCAAGGGACCATCAATTACCGCCATGGTNGGAACTGCTTCCAGCTCTTCAA
JMSF047K21+           TTGATGGCTCCAAGGGACCATCAATTACCGCCATGGTNGGAACTGCTTCCAGCTCTTCAA
                      ____________________________________________________________
consensus             TTGATGGCTCCAAGGGACCATCAATTACCGCCATGGTNGGAACTGCTTCCAGCTCTTCAA
 
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JMSF020K03+           ATTCACTCTTGACTGGAGGTACTTTTGACTTTGAAGGCACCTTTGAATACGCATTCAGTA
JMSF047K21+           ATTCACTCTTGACTGGAGGTACTTTTGACTTTGAAGGCACCTTTGAATACGCATTCAGTA
                      ____________________________________________________________
consensus             ATTCACTCTTGACTGGAGGTACTTTTGACTTTGAAGGCACCTTTGAATACGCATTCAGTA
 
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JMSF020K03+           TCCTGCTAAATAGATTTGCAACCTCCTCACATTCACGTGCATTGTAAAACCATATTCCAT
JMSF047K21+           TCCTGCTAAATAGATTTGCAACCTCCTCACATTCACGTGCATTGTAAAACCATATTCCAT
                      ____________________________________________________________
consensus             TCCTGCTAAATAGATTTGCAACCTCCTCACATTCACGTGCATTGTAAAACCATATTCCAT
 
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JMSF020K03+           TAACTTCCTGGGCAGCATTCCGATACAGTAAATATGGAACCTGGATCTCATACTCAAAAT
JMSF047K21+           TAACTTCCTGGGCAGCATTCCGATACAGTAAATATGGAACCTGGATCTCATACTCAAAAT
                      ____________________________________________________________
consensus             TAACTTCCTGGGCAGCATTCCGATACAGTAAATATGGAACCTGGATCTCATACTCAAAAT
 
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JMSF020K03+           CTCCCAAGAGATCCTCCACCAAGTTATCTGCATTTCTGCGATTCATTACAATGAATTGGA
JMSF047K21+           CTCCCAAGAGATCCTCCACCAAGTTATCTGCATTTCTGCGATTCATTACAATGAATTGGA
                      ____________________________________________________________
consensus             CTCCCAAGAGATCCTCCACCAAGTTATCTGCATTTCTGCGATTCATTACAATGAATTGGA
 
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JMSF020K03+           ACCTAGGTTGAGAAGTCCTCTTAACAACGAAGAGAGATCCTTCAACATCCTTTCGACTCC
JMSF047K21+           ACCTAGGTTGAGAAGTCCTCTTAACAACGAAGAGAGATCCTTCAACATCCTTTCGACTCC
                      ____________________________________________________________
consensus             ACCTAGGTTGAGAAGTCCTCTTAACAACGAAGAGAGATCCTTCAACATCCTTTCGACTCC
 
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JMSF020K03+           ATTGGCTCGTATCAATGTTAAATTCATAGAAGGTGACGTGAGCGGCGGTGATGAGAATTT
JMSF047K21+           ATTGGCTCGTATCAATGTTAAATTCATAGAAGGTGACGTGAGCGGCGGTGATGAGAATTT
                      ____________________________________________________________
consensus             ATTGGCTCGTATCAATGTTAAATTCATAGAAGGTGACGTGAGCGGCGGTGATGAGAATTT
 
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JMSF020K03+           CCTCAATGTAGGGATCGATTCGTTGCAGAACGGTGAGGTTGAGCTGCTTCGTGCTGTTCT
JMSF047K21+           CCTCAATGTAGGGATCGATTCGTTGCAGAACGGTGAGGTTGAGCTGCTTCGTGCTGTTCT
                      ____________________________________________________________
consensus             CCTCAATGTAGGGATCGATTCGTTGCAGAACGGTGAGGTTGAGCTGCTTCGTGCTGTTCT
 
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JMSF020K03+           GATCAAGATTTGGCATCAATTTCCCGCTTTGCGCCATGTTGTTTGTGCTTTCTCCCCGAC
JMSF047K21+           GATCAAGATTTGGCATCAATTTCCCGCTTTGCGCCATGTTGTTTGTGCTTTCTCCCCGAC
                      ____________________________________________________________
consensus             GATCAAGATTTGGCATCAATTTCCCGCTTTGCGCCATGTTGTTTGTGCTTTCTCCCCGAC
 
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JMSF020K03+           TCTTCGAGAGCTATAAACCCTAGCAATGGCGGTCAAATGTTGCACGCGCTCTCCCCCTAT
JMSF047K21+           TCTTCGAGAGCTATAAACCCTAGCAATGGCGGTCAAATGTTGCACGCGCTCTCCCCCTAT
                      ____________________________________________________________
consensus             TCTTCGAGAGCTATAAACCCTAGCAATGGCGGTCAAATGTTGCACGCGCTCTCCCCCTAT
 
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JMSF020K03+           CAGTGAATGGAATTTTATCGTAAAAAATTAAAAATAACTTGCCTTTTTAATCTTACTCTC
JMSF047K21+           CAGTGAATGGAATTTTATCGTAAAAAATTAAAAATAACTTGCCTTTTTAATCTTACTCTC
                      ____________________________________________________________
consensus             CAGTGAATGGAATTTTATCGTAAAAAATTAAAAATAACTTGCCTTTTTAATCTTACTCTC