Contig 000960:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022L20Sequence660000960 (2)ref|XP_009604417.1|1e-59PREDICTED: probable receptor protein kinase TMK1 [Nicotiana tomentosiformis]756011417 (2)ref|XP_009787090.1|5e-38PREDICTED: crocetin glucosyltransferase, chloroplastic-like [Nicotiana sylvestr
JMSF046G12Sequence258000960 (2)ref|XP_009604417.1|2e-05PREDICTED: probable receptor protein kinase TMK1 [Nicotiana tomentosiformis]764011417 (2)ref|XP_009787090.1|6e-38PREDICTED: crocetin glucosyltransferase, chloroplastic-like [Nicotiana sylvestr

Alignment

This contig is upended


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JMSF022L20+                                                                      G
                      ____________________________________________________________
consensus                                                                        G
 
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JMSF022L20+           GATAATATTACGTTCTCGAGATTTGGGAAAGAATCGAAGAAATCAGGAATGATACCAAAA
                      ____________________________________________________________
consensus             GATAATATTACGTTCTCGAGATTTGGGAAAGAATCGAAGAAATCAGGAATGATACCAAAA
 
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JMSF022L20+           ACATTAGCGTTACTGGCGTAGAAAGAAACCAAATTACTGCTTCGGTTCAGGTGCGTGGGA
                      ____________________________________________________________
consensus             ACATTAGCGTTACTGGCGTAGAAAGAAACCAAATTACTGCTTCGGTTCAGGTGCGTGGGA
 
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JMSF022L20+           ATTTCCCAGGAACTAAGGTTTCGATTTCCAGAAACGCTGAAACTCTTCAAACGGGGAAGA
                      ____________________________________________________________
consensus             ATTTCCCAGGAACTAAGGTTTCGATTTCCAGAAACGCTGAAACTCTTCAAACGGGGAAGA
 
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JMSF022L20+           CCGGAGAGGAAATCCGGCGGGACTGAGCTGAAGTTATTGCCGTCTAACCGGAGCTCTTCG
                      ____________________________________________________________
consensus             CCGGAGAGGAAATCCGGCGGGACTGAGCTGAAGTTATTGCCGTCTAACCGGAGCTCTTCG
 
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JMSF022L20+           AGCTCCGGCATGTTAGCGAAAGAAGGTAAGGGTCCGGAAAGGGAGTTCCCGGAGACGGAG
                      ____________________________________________________________
consensus             AGCTCCGGCATGTTAGCGAAAGAAGGTAAGGGTCCGGAAAGGGAGTTCCCGGAGACGGAG
 
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JMSF022L20+           AGGTTTTTGAGCGAGGAGAGCTGTGTGATCCCGGAGAAGAGTTCGCCGGAAACGGAGAGC
                      ____________________________________________________________
consensus             AGGTTTTTGAGCGAGGAGAGCTGTGTGATCCCGGAGAAGAGTTCGCCGGAAACGGAGAGC
 
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JMSF022L20+           GAGTCGATTTTGATGGATATGACATTCTTCCCGGCGGTGTCGTCGCAAGTGACGTGAGTC
JMSF046G12+                                                     TCGCAANTGACGTGANTC
                      ____________________________________________________________
consensus             GAGTCGATTTTGATGGATATGACATTCTTCCCGGCGGTGTCGTCGCAAGTGACGTGAGTC
 
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JMSF022L20+           CAAGAACAGTAGTGGGTGGAGTTTGACCAGTGGTTGGGTGCGGGAGAAATGGCAGCGAGG
JMSF046G12+           CAAGAACNGTAGTGNGTNGAGTTTGACCANTGGTTGGCTGCGGGAGAAATGGCAGCGAGG
                      ____________________________________________________________
consensus             CAAGAACAGTAGTGGGTGGAGTTTGACCAGTGGTTGGGTGCGGGAGAAATGGCAGCGAGG
 
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JMSF022L20+           AGCTGGGACATTACAGCGCCGTCGTCGGAGAATGTGATGCCGGAGAAGAAGGTGAGTACG
JMSF046G12+           AGCTGGGACATTACAGCGCCGTCGTCGGAGAATGTGATGCCGNAGAAGAAGGTGAGTACG
                      ____________________________________________________________
consensus             AGCTGGGACATTACAGCGCCGTCGTCGGAGAATGTGATGCCGGAGAAGAAGGTGAGTACG
 
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JMSF022L20+           ATGATGATGAAGAGGTGGATGTGAAAGGGACGGA-GTGAGGCCATTAATGATGAATTGAT
JMSF046G12+           ATGATGATGAAGAGGTGGATGTGAAAGGGACGGACGTGAGGCCATTAATGATGAATTGAT
                      ____________________________________________________________
consensus             ATGATGATGAAGAGGTGGATGTGAAAGGGACGGACGTGAGGCCATTAATGATGAATTGAT
 
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JMSF022L20+           GATGATGAGGAGGTTAATGTGGTAGGGATGGAGTGCAGTTTGGATGACTATAACAGCATC
JMSF046G12+           GATGATGAGGAGGTTAATGTGGTAGGNATGGAGTGCNGTTTGGATGACTATAACAGCATC
                      ____________________________________________________________
consensus             GATGATGAGGAGGTTAATGTGGTAGGGATGGAGTGCAGTTTGGATGACTATAACAGCATC