Contig 000958:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031B15Sequence611000958 (2)ref|XP_009758034.1|3e-77PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Nic716005814 (2)emb|CDP07839.1|5e-102unnamed protein product [Coffea canephora]
JMSF046D01Sequence452000958 (2)ref|XP_009758034.1|1e-43PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Nic817005814 (2)emb|CDP07839.1|2e-124unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF031B15+                                                            TATCAGTCGCG
                      ____________________________________________________________
consensus                                                              TATCAGTCGCG
 
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JMSF031B15+           ACGCGAAACATTCCAGGAAGTGCAATACCTGCCCCACTTCCCATCGTGACACCATNTAAG
                      ____________________________________________________________
consensus             ACGCGAAACATTCCAGGAAGTGCAATACCTGCCCCACTTCCCATCGTGACACCATNTAAG
 
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JMSF031B15+           ATAGCAACANTCGGCTTCAGATATGTTCCTAAAAGGTAGACAAAATTATACAGTGTCTGG
                      ____________________________________________________________
consensus             ATAGCAACANTCGGCTTCAGATATGTTCCTAAAAGGTAGACAAAATTATACAGTGTCTGG
 
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JMSF031B15+           AAGAAAATTTTGCATTCCTCAACCTTCCCTTCATTAATCAACTGANGAAGCGTAACAACA
JMSF046D01+                                       CTTCATTAATCAACTGATGAAGCGTAACAACA
                      ____________________________________________________________
consensus             AAGAAAATTTTGCATTCCTCAACCTTCCCTTCATTAATCAACTGATGAAGCGTAACAACA
 
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JMSF031B15+           TCAGCTCCAGAACAGAAAGCTCGATCATTCCCCTTCATAACAACAAATCCAATTTCAGAG
JMSF046D01+           TCAGCTCCAGAACAGAAAGCTCGATCATTCCCCTTCATAACAACAAATCCAATTTCAGAG
                      ____________________________________________________________
consensus             TCAGCTCCAGAACAGAAAGCTCGATCATTCCCCTTCATAACAACAAATCCAATTTCAGAG
 
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JMSF031B15+           TTCTCCTCCCACGAGTTATACAATCTATTCAAGCGAGCCACCATAGAGCTAGTGAGAGAA
JMSF046D01+           TTCTCCTCCCACGAGTTATACAATCTATTCAAGCGAGCCACCATAGAGCTAGTGAGAGAA
                      ____________________________________________________________
consensus             TTCTCCTCCCACGAGTTATACAATCTATTCAAGCGAGCCACCATAGAGCTAGTGAGAGAA
 
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JMSF031B15+           NTGAGTGCAGAAGGTCTATTGAGTATTGCTGCTCTTGATTTCGCCCTTCCTTCAANTAAA
JMSF046D01+           TTGAGTGCAGAAGGTCTATTGAGTATTGCTGCTCTTGATTTCGCCCTTCCTTCAACTAAA
                      ____________________________________________________________
consensus             TTGAGTGCAGAAGGTCTATTGAGTATTGCTGCTCTTGATTTCGCCCTTCCTTCAACTAAA
 
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JMSF031B15+           ACCTGGTCTTGAAGATAATCGTGTTGGGTGTAGCTCGGAAGAGCAGAAAAGCTTCTGTTT
JMSF046D01+           ACCTGGTCTTGAAGATAATCGTGTTGGGTGTAGCTCGGAAGAGCAGAAAAGCTTCTGTTT
                      ____________________________________________________________
consensus             ACCTGGTCTTGAAGATAATCGTGTTGGGTGTAGCTCGGAAGAGCAGAAAAGCTTCTGTTT
 
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JMSF031B15+           TGGTGAGAATAGAGAAATCCANGCCTTTGCTTAGAACATCGACTCAGTAATTGTAGAGTT
JMSF046D01+           TGGTGAGAATAGAGAAATCCANGCCTTTGCTTAGAACATCGACTCAGTAATTGTAGAGTT
                      ____________________________________________________________
consensus             TGGTGAGAATAGAGAAATCCANGCCTTTGCTTAGAACATCGACTCAGTAATTGTAGAGTT
 
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JMSF031B15+           TTCAATCCTATTCCTGGCATTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCCCCCTATCTC
JMSF046D01+           TTCAATCCTATTCCTGGCATTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCCCCCTATCTC
                      ____________________________________________________________
consensus             TTCAATCCTATTCCTGGCATTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCCCCCTATCTC
 
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JMSF031B15+           TCTCGCGTCGCCGTGGGTGCGTTGCGGCTACTGAGCTTTTCAATGGCAGTCTAGTCTG  
JMSF046D01+           TCTCGCGTCGCCGTGGGTGCGTTGCGGCTACTGAGCTTTTCAATGGCAGTCTAGTCTGCC
                      ____________________________________________________________
consensus             TCTCGCGTCGCCGTGGGTGCGTTGCGGCTACTGAGCTTTTCAATGGCAGTCTAGTCTGCC