Contig 000957:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN005D18+                                       GCCAATGAAAATTCCTGAACAAATACATAATA
                      ____________________________________________________________
consensus                                         GCCAATGAAAATTCCTGAACAAATACATAATA
 
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JMFN005D18+           AAACCCAACAAACTTGGTTTCAAAAGACTGCCCAAAGGATATATGTATATCTTGCTTCTC
rJMSF046B10-                                AAAGACTGCCCAAAGGATATATGTATATCTTGCTTCTC
                      ____________________________________________________________
consensus             AAACCCAACAAACTTGGTTTCAAAAGACTGCCCAAAGGATATATGTATATCTTGCTTCTC
 
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JMFN005D18+           TTTTGAGCAGGGAAACTACAGCATATCCACAGTTTCATCAACCAACTACTATGAAACATG
rJMSF046B10-          TTTTGAGCAGGGAAACTACAGCATATCCACAGTTTCATCAACCAACTACTATGAAACATG
                      ____________________________________________________________
consensus             TTTTGAGCAGGGAAACTACAGCATATCCACAGTTTCATCAACCAACTACTATGAAACATG
 
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JMFN005D18+           TAACCACAAGCATCTGAGAAGTTAATTAGATGAATATACTTGCCACCCAACAACTTTGTA
rJMSF046B10-          TAACCACAAGCATCTGAGAAGTTAATTAGATGAATATACTTGCCACCCAACAACTTTGTA
                      ____________________________________________________________
consensus             TAACCACAAGCATCTGAGAAGTTAATTAGATGAATATACTTGCCACCCAACAACTTTGTA
 
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JMFN005D18+           CATCTACAAACTTGATTCAAACATGCATGACGACTTTCCTCTCAGTAATGCGGGGGTGGA
rJMSF046B10-          CATCTACAAACTTGATTCAAACATGCATGACGACTTTCCTCTCAGTAATGCGGGGGTGGA
                      ____________________________________________________________
consensus             CATCTACAAACTTGATTCAAACATGCATGACGACTTTCCTCTCAGTAATGCGGGGGTGGA
 
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JMFN005D18+           GGGTAGGTTCCGGGATAATGACCTGGGGGGTAATACGATGCGTCGTACATGTGTGGTGGA
rJMSF046B10-          GGGTAGGTTCCGGGATAATGACCTGGGGGGTAATACGATGCGTCGTACATGTGTGGTGGA
                      ____________________________________________________________
consensus             GGGTAGGTTCCGGGATAATGACCTGGGGGGTAATACGATGCGTCGTACATGTGTGGTGGA
 
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JMFN005D18+           TATGATGGGGGAGGATATGCCGAAGGTGTTGTGTAAGGCGGTGGGTAAGCACCCGGTTGA
rJMSF046B10-          TATGATGGGGGAGGATATGCCGAAGGTGTTGTGTAAGGCGGTGGGTAAGCACCCGGTTGA
                      ____________________________________________________________
consensus             TATGATGGGGGAGGATATGCCGAAGGTGTTGTGTAAGGCGGTGGGTAAGCACCCGGTTGA
 
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JMFN005D18+           GGAGGTGGAGGATAGGCGGCTGGCTGAGGAGGGTATGAAGAGTAAGGAGACGGTGCTGGA
rJMSF046B10-          GGAGGTGGAGGATAGGCGGCTGGCTGAGGAGGGTATGAAGAGTAAGGAGACGGTGCTGGA
JMSF046B10+                                           GTATGAAGAGTAAGGAGACGGTGCTGGA
                      ____________________________________________________________
consensus             GGAGGTGGAGGATAGGCGGCTGGCTGAGGAGGGTATGAAGAGTAAGGAGACGGTGCTGGA
 
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JMFN005D18+           TAAGGATGTGTTGAGTACGGAGATGGTGTTGGATAAGGGGAAGGCATTGGATAGGAGGCC
rJMSF046B10-          TAAGGATGTGTTGAGTACGGAGATGGTGTTGGATAAGGGGAAGGCATTGGATAGGAGGCC
JMSF046B10+           TAAGGATGTGTTGAGTACGGAGATGGTGTTGGATAAGGGGAAGGCATTGGATAGGAGGCC
                      ____________________________________________________________
consensus             TAAGGATGTGTTGAGTACGGAGATGGTGTTGGATAAGGGGAAGGCATTGGATAGGAGGCC
 
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JMFN005D18+           ATATGTGGCGGTGGGGCAGAATGGAGAGTTGCTTGTGGTGCCGGTGGTGGAATATAGGGA
rJMSF046B10-          ATATGTGGCGGTGGGGCAGAATGGAGAGTTGCTTGTGGTGCCGGTGGTGGAATATAGGGA
JMSF046B10+           ATATGTGGCGGTGGGGCAGAATGGAGAGTTGCTTGTGGTGCCGGTGGTGGAATATAGGGA
                      ____________________________________________________________
consensus             ATATGTGGCGGTGGGGCAGAATGGAGAGTTGCTTGTGGTGCCGGTGGTGGAATATAGGGA
 
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JMFN005D18+           GGAGCAGATGGAGCGTAGCTTGTTGCCGGCTTATTAGCA-TTTGCATAGTGCATTATCAG
rJMSF046B10-          GGAGCAGATGGAGCGTANCTTGTTGCCGGCTTATTAGCATTTTGCATAGTGCATTATCAG
JMSF046B10+           GGAGCAGATGGAGCGTAGCTTGTTGCCGGCTTATTAGCA-TTTGCATAGTGCATTATCAG
                      ____________________________________________________________
consensus             GGAGCAGATGGAGCGTAGCTTGTTGCCGGCTTATTAGCA-TTTGCATAGTGCATTATCAG
 
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JMFN005D18+           CCGAACTTCTC                                                 
rJMSF046B10-          CCGAACTTCTCCTGCATTTCTGCCAGTCTTTGTTTGG                       
JMSF046B10+           CCGAACTTCTCCTGCATTTCTGCCAGTCTTTGTTTGGAGTGGCCAAGAGCTATCATCATA
                      ____________________________________________________________
consensus             CCGAACTTCTCCTGCATTTCTGCCAGTCTTTGTTTGGAGTGGCCAAGAGCTATCATCATA
 
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JMSF046B10+           GCCTTGAGAGAGAACTCTGTGGAGTATAACCTTTCCACTGCCAATGAAATCGTCGTAGGT
                      ____________________________________________________________
consensus             GCCTTGAGAGAGAACTCTGTGGAGTATAACCTTTCCACTGCCAATGAAATCGTCGTAGGT
 
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JMSF046B10+           AATTGTATTGCTATTCCAGACAACAACATTCAGCTCCCTCAAGCCTTCAATCATTGAAAA
                      ____________________________________________________________
consensus             AATTGTATTGCTATTCCAGACAACAACATTCAGCTCCCTCAAGCCTTCAATCATTGAAAA
 
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JMSF046B10+           CACGAATTTTTCTTGGAAGGTAGGGCTTTTCCCCCCATCAGTACAGGTACGCGTCCGGAA
                      ____________________________________________________________
consensus             CACGAATTTTTCTTGGAAGGTAGGGCTTTTCCCCCCATCAGTACAGGTACGCGTCCGGAA
 
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JMSF046B10+           CTTTGTGCTAGCATATTCAAGGCAGACATAGGGATCTTGCCTGGAGATCCATTCTGTGTC
                      ____________________________________________________________
consensus             CTTTGTGCTAGCATATTCAAGGCAGACATAGGGATCTTGCCTGGAGATCCATTCTGTGTC
 
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JMSF046B10+           CTTCAACTTTTGACAAGAAACGACGGTAACTTCGAGAAGTTGACCTTGGATGCTAGAAAT
                      ____________________________________________________________
consensus             CTTCAACTTTTGACAAGAAACGACGGTAACTTCGAGAAGTTGACCTTGGATGCTAGAAAT
 
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JMSF046B10+           CGACATGGAAGAGGCCCCGGACGAAGAATTTGGTTTATGTTTGCTTGACGACATCTCGCT
                      ____________________________________________________________
consensus             CGACATGGAAGAGGCCCCGGACGAAGAATTTGGTTTATGTTTGCTTGACGACATCTCGCT
 
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JMSF046B10+           GTGCTAAAACCAACCGCTTTTATGGGATAACCATACAAAAAAATTACTCCCTCCGTAATT
                      ____________________________________________________________
consensus             GTGCTAAAACCAACCGCTTTTATGGGATAACCATACAAAAAAATTACTCCCTCCGTAATT
 
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JMSF046B10+           AATTACAGTAAATATAAGGTAAAAAACAAAATAATAATTTTAATTTTAATTTTGCTCCAA
                      ____________________________________________________________
consensus             AATTACAGTAAATATAAGGTAAAAAACAAAATAATAATTTTAATTTTAATTTTGCTCCAA