Contig 000956:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF045A21Sequence694000956 (2)ref|XP_007203653.1|2e-15hypothetical protein PRUPE_ppb013559mg, partial [Prunus persica] gb|EMJ04852.1| 770016188gb|KJB73948.1|2e-11hypothetical protein B456_011G262200, partial [Gossypium raimondii]
JMSF046A21Sequence688000956 (2)ref|XP_007203653.1|2e-15hypothetical protein PRUPE_ppb013559mg, partial [Prunus persica] gb|EMJ04852.1| 674017255gb|KJB73948.1|1e-11hypothetical protein B456_011G262200, partial [Gossypium raimondii]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF045A21+ TTCTNTAATTTGAGAATTTTTCAACCCTATATAT
JMSF046A21+ TTTTTCAACCCTATATAT
                      ____________________________________________________________
consensus TTCTNTAATTTGAGAATTTTTCAACCCTATATAT
 
. : . : . : . : . : . :
JMSF045A21+ ATAGTGATAGCACAAAAAAGCAAAAAGGAAGCAGAACAAAGAGAGAGAGCTGCCATAAAA
JMSF046A21+ ATAGTGATAGCACAAAAAAGCAAAAAGGAAGCAGAACAAAGAGAGAGAGCTGCCATAAAA
                      ____________________________________________________________
consensus ATAGTGATAGCACAAAAAAGCAAAAAGGAAGCAGAACAAAGAGAGAGAGCTGCCATAAAA
 
. : . : . : . : . : . :
JMSF045A21+ GGCAGTNTGAGTTGTGATTGCATTGTATACTTGCCACAACAAATAAACAAAACAAAATGA
JMSF046A21+ GGCAGTNTGAGTTGTGATTGCATTGTATACTTGCCACAACAAATAAACAAAACAAAATGA
                      ____________________________________________________________
consensus GGCAGTNTGAGTTGTGATTGCATTGTATACTTGCCACAACAAATAAACAAAACAAAATGA
 
. : . : . : . : . : . :
JMSF045A21+ TACAAAACCCAGTTTTAGTCTATTGAGGAACTCCTTGAAAACACCAAAGGAATCTAAGAA
JMSF046A21+ TACAAAACCCAGTTTTAGTCTATTGAGGAACTCCTTGAAAACACCAAAGGAATCTAAGAA
                      ____________________________________________________________
consensus TACAAAACCCAGTTTTAGTCTATTGAGGAACTCCTTGAAAACACCAAAGGAATCTAAGAA
 
. : . : . : . : . : . :
JMSF045A21+ TAAGTGGAAAATCACAACAAAGTAGCAGACAATTTCGTTGAAATATTGGGGGAAAATAAC
JMSF046A21+ TAAGTGGAAAATCACAACAAAGTAGCAGACAATTTCGTTGAAATATTGGGGGAAAATAAC
                      ____________________________________________________________
consensus TAAGTGGAAAATCACAACAAAGTAGCAGACAATTTCGTTGAAATATTGGGGGAAAATAAC
 
. : . : . : . : . : . :
JMSF045A21+ TGGAATATTCAATCCAATTTGTAGCATAATCAGCTAGAAGTTTATCAAAATTATAATCCA
JMSF046A21+ TGGAATATTCAATCCAATTTGTAGCATAATCAGCTAGAAGTTTATCAAAATTATAATCCA
                      ____________________________________________________________
consensus TGGAATATTCAATCCAATTTGTAGCATAATCAGCTAGAAGTTTATCAAAATTATAATCCA
 
. : . : . : . : . : . :
JMSF045A21+ CAAATTCATTCAATCATTAGCTTTATACGATTAACAAAATTGGATTTTGCACAGCCTGTT
JMSF046A21+ CAAATTCATTCAATCATTAGCTTTATACGATTAACAAAATTGGATTTTGCACAGCCTGTT
                      ____________________________________________________________
consensus CAAATTCATTCAATCATTAGCTTTATACGATTAACAAAATTGGATTTTGCACAGCCTGTT
 
. : . : . : . : . : . :
JMSF045A21+ AATGATGGCATCTTGAATAAGTCCCTCATCAGGAGATCGGATAGAGGAAACAGCATGCCA
JMSF046A21+ AATGATGGCATCTTGAATAAGTCCCTCATCAGGAGATCGGATAGAGGAAACAGCATGCCA
                      ____________________________________________________________
consensus AATGATGGCATCTTGAATAAGTCCCTCATCAGGAGATCGGATAGAGGAAACAGCATGCCA
 
. : . : . : . : . : . :
JMSF045A21+ AATTCAATTCAGAAGAAGGGGGGATCACCAAAAAATTAGCAGAAAAGCAGATTAAATTCC
JMSF046A21+ AATTCAATTCAGAAGAAGGGGGGATCACCAAAAAATTAGCAGAAAAGCAGATTAAATTCC
                      ____________________________________________________________
consensus AATTCAATTCAGAAGAAGGGGGGATCACCAAAAAATTAGCAGAAAAGCAGATTAAATTCC
 
. : . : . : . : . : . :
JMSF045A21+ CAGATTTTGGGTTCAAAAAAAATTTGGACCATTTCTCGATTTGTGCGTGTCATCCTTGCG
JMSF046A21+ CAGATTTTGGGTTCAAAAAAAATTTGGACCATTTCTCGATTTGTGCGTGTCATCCTTGCG
                      ____________________________________________________________
consensus CAGATTTTGGGTTCAAAAAAAATTTGGACCATTTCTCGATTTGTGCGTGTCATCCTTGCG
 
. : . : . : . : . : . :
JMSF045A21+ CAGGGGCCATGCTAATCTTCTCTGTATCGTTCCAATTTTATCGGATGTCCCCGAAGG
JMSF046A21+ CAGGGGCCATGCTAATCTTCTCTGTATCGTTCCAATTTTATCGGATGTCCCCGAAGGGAC
                      ____________________________________________________________
consensus CAGGGGCCATGCTAATCTTCTCTGTATCGTTCCAATTTTATCGGATGTCCCCGAAGGGAC
 
. : . : . : . : . : . :
JMSF046A21+ GTTCTTGTTCTTCAATGGCGAACTATATGTACTGGAAGATAGCTGGTTCATCGCCCGACC
                      ____________________________________________________________
consensus GTTCTTGTTCTTCAATGGCGAACTATATGTACTGGAAGATAGCTGGTTCATCGCCCGACC