Contig 000956:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF045A21Sequence694000956 (2)ref|XP_007203653.1|2e-15hypothetical protein PRUPE_ppb013559mg, partial [Prunus persica] gb|EMJ04852.1| 770016188gb|KJB73948.1|2e-11hypothetical protein B456_011G262200, partial [Gossypium raimondii]
JMSF046A21Sequence688000956 (2)ref|XP_007203653.1|2e-15hypothetical protein PRUPE_ppb013559mg, partial [Prunus persica] gb|EMJ04852.1| 674017255gb|KJB73948.1|1e-11hypothetical protein B456_011G262200, partial [Gossypium raimondii]

Alignment

This contig is upended


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JMSF045A21+                                     TTCTNTAATTTGAGAATTTTTCAACCCTATATAT
JMSF046A21+                                                     TTTTTCAACCCTATATAT
                      ____________________________________________________________
consensus                                       TTCTNTAATTTGAGAATTTTTCAACCCTATATAT
 
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JMSF045A21+           ATAGTGATAGCACAAAAAAGCAAAAAGGAAGCAGAACAAAGAGAGAGAGCTGCCATAAAA
JMSF046A21+           ATAGTGATAGCACAAAAAAGCAAAAAGGAAGCAGAACAAAGAGAGAGAGCTGCCATAAAA
                      ____________________________________________________________
consensus             ATAGTGATAGCACAAAAAAGCAAAAAGGAAGCAGAACAAAGAGAGAGAGCTGCCATAAAA
 
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JMSF045A21+           GGCAGTNTGAGTTGTGATTGCATTGTATACTTGCCACAACAAATAAACAAAACAAAATGA
JMSF046A21+           GGCAGTNTGAGTTGTGATTGCATTGTATACTTGCCACAACAAATAAACAAAACAAAATGA
                      ____________________________________________________________
consensus             GGCAGTNTGAGTTGTGATTGCATTGTATACTTGCCACAACAAATAAACAAAACAAAATGA
 
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JMSF045A21+           TACAAAACCCAGTTTTAGTCTATTGAGGAACTCCTTGAAAACACCAAAGGAATCTAAGAA
JMSF046A21+           TACAAAACCCAGTTTTAGTCTATTGAGGAACTCCTTGAAAACACCAAAGGAATCTAAGAA
                      ____________________________________________________________
consensus             TACAAAACCCAGTTTTAGTCTATTGAGGAACTCCTTGAAAACACCAAAGGAATCTAAGAA
 
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JMSF045A21+           TAAGTGGAAAATCACAACAAAGTAGCAGACAATTTCGTTGAAATATTGGGGGAAAATAAC
JMSF046A21+           TAAGTGGAAAATCACAACAAAGTAGCAGACAATTTCGTTGAAATATTGGGGGAAAATAAC
                      ____________________________________________________________
consensus             TAAGTGGAAAATCACAACAAAGTAGCAGACAATTTCGTTGAAATATTGGGGGAAAATAAC
 
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JMSF045A21+           TGGAATATTCAATCCAATTTGTAGCATAATCAGCTAGAAGTTTATCAAAATTATAATCCA
JMSF046A21+           TGGAATATTCAATCCAATTTGTAGCATAATCAGCTAGAAGTTTATCAAAATTATAATCCA
                      ____________________________________________________________
consensus             TGGAATATTCAATCCAATTTGTAGCATAATCAGCTAGAAGTTTATCAAAATTATAATCCA
 
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JMSF045A21+           CAAATTCATTCAATCATTAGCTTTATACGATTAACAAAATTGGATTTTGCACAGCCTGTT
JMSF046A21+           CAAATTCATTCAATCATTAGCTTTATACGATTAACAAAATTGGATTTTGCACAGCCTGTT
                      ____________________________________________________________
consensus             CAAATTCATTCAATCATTAGCTTTATACGATTAACAAAATTGGATTTTGCACAGCCTGTT
 
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JMSF045A21+           AATGATGGCATCTTGAATAAGTCCCTCATCAGGAGATCGGATAGAGGAAACAGCATGCCA
JMSF046A21+           AATGATGGCATCTTGAATAAGTCCCTCATCAGGAGATCGGATAGAGGAAACAGCATGCCA
                      ____________________________________________________________
consensus             AATGATGGCATCTTGAATAAGTCCCTCATCAGGAGATCGGATAGAGGAAACAGCATGCCA
 
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JMSF045A21+           AATTCAATTCAGAAGAAGGGGGGATCACCAAAAAATTAGCAGAAAAGCAGATTAAATTCC
JMSF046A21+           AATTCAATTCAGAAGAAGGGGGGATCACCAAAAAATTAGCAGAAAAGCAGATTAAATTCC
                      ____________________________________________________________
consensus             AATTCAATTCAGAAGAAGGGGGGATCACCAAAAAATTAGCAGAAAAGCAGATTAAATTCC
 
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JMSF045A21+           CAGATTTTGGGTTCAAAAAAAATTTGGACCATTTCTCGATTTGTGCGTGTCATCCTTGCG
JMSF046A21+           CAGATTTTGGGTTCAAAAAAAATTTGGACCATTTCTCGATTTGTGCGTGTCATCCTTGCG
                      ____________________________________________________________
consensus             CAGATTTTGGGTTCAAAAAAAATTTGGACCATTTCTCGATTTGTGCGTGTCATCCTTGCG
 
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JMSF045A21+           CAGGGGCCATGCTAATCTTCTCTGTATCGTTCCAATTTTATCGGATGTCCCCGAAGG   
JMSF046A21+           CAGGGGCCATGCTAATCTTCTCTGTATCGTTCCAATTTTATCGGATGTCCCCGAAGGGAC
                      ____________________________________________________________
consensus             CAGGGGCCATGCTAATCTTCTCTGTATCGTTCCAATTTTATCGGATGTCCCCGAAGGGAC
 
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JMSF046A21+           GTTCTTGTTCTTCAATGGCGAACTATATGTACTGGAAGATAGCTGGTTCATCGCCCGACC
                      ____________________________________________________________
consensus             GTTCTTGTTCTTCAATGGCGAACTATATGTACTGGAAGATAGCTGGTTCATCGCCCGACC