Contig 000955:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003N24Sequence555000955 (12)ref|XP_011015557.1|2e-88PREDICTED: selenium-binding protein 1-like [Populus euphratica]700004034 (10)emb|CDP15102.1|1e-113unnamed protein product [Coffea canephora]
JMFF012E15Sequence543000955 (12)ref|XP_011015557.1|2e-86PREDICTED: selenium-binding protein 1-like [Populus euphratica]751004034 (10)emb|CDP15102.1|1e-125unnamed protein product [Coffea canephora]
JMFF018C01Sequence194000955 (12)
JMFF023K18Sequence473000955 (12)ref|XP_011015557.1|7e-72PREDICTED: selenium-binding protein 1-like [Populus euphratica]628004034 (10)emb|CDP15102.1|5e-103unnamed protein product [Coffea canephora]
JMFF026D19Sequence537000955 (12)ref|XP_011015557.1|1e-75PREDICTED: selenium-binding protein 1-like [Populus euphratica]745004034 (10)emb|CDP15102.1|3e-113unnamed protein product [Coffea canephora]
JMFF035F08Sequence580000955 (12)ref|XP_011015557.1|1e-87PREDICTED: selenium-binding protein 1-like [Populus euphratica]724004034 (10)emb|CDP15102.1|8e-120unnamed protein product [Coffea canephora]
JMFF035H02Sequence575000955 (12)ref|XP_011015557.1|5e-86PREDICTED: selenium-binding protein 1-like [Populus euphratica]721004034 (10)emb|CDP15102.1|4e-119unnamed protein product [Coffea canephora]
JMFF041M08Sequence633000955 (12)ref|XP_011015557.1|7e-101PREDICTED: selenium-binding protein 1-like [Populus euphratica]611004034 (10)emb|CDP15102.1|3e-87unnamed protein product [Coffea canephora]
JMFF044K03Sequence643000955 (12)ref|XP_011015557.1|3e-113PREDICTED: selenium-binding protein 1-like [Populus euphratica]579004034 (10)emb|CDP15102.1|8e-82unnamed protein product [Coffea canephora]
JMFF050K23Sequence607000955 (12)ref|XP_011015557.1|1e-81PREDICTED: selenium-binding protein 1-like [Populus euphratica]566004034 (10)emb|CDP15102.1|2e-77unnamed protein product [Coffea canephora]
JMFS036F03Sequence618000955 (12)ref|XP_011015557.1|1e-121PREDICTED: selenium-binding protein 1-like [Populus euphratica]
JMSF045M13Sequence778000955 (12)ref|XP_011015557.1|2e-119PREDICTED: selenium-binding protein 1-like [Populus euphratica]752004034 (10)emb|CDP15102.1|1e-133unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF044K03+                                                           AGTGGACTGTGC
JMFS036F03+                                  TTGGTACCAAAAATCGTACCCGTACAGTGGACTGTGC
JMSF045M13+             ATCATCGTCTTGTGTCGAGGTTTGGTACCAAAAATCGTACCCGTACAGTGGACTGTGC
                      ____________________________________________________________
consensus               ATCATCGTCTTGTGTCGAGGTTTGGTACCAAAAATCGTACCCGTACAGTGGACTGTGC
 
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JMFF044K03+           CCCGGCTTTTCCCACCGCCCCTTCACATTGAAATCAGAATCAAGAAGAAGAAACCCATTC
JMFF041M08+                                            TCAGAATCAAGAAGAAGAAACCCATTC
JMFS036F03+           CCCGGCTTTTCCCACCGCCCCTTCACATTGAAATCAGAATCAAGAAGAAGAAACCCATTC
JMSF045M13+           CCCGGCTTTTCCCACCGCCCCTTCACATTGAAATCAGAATCAAGAAGAAGAAACCCATTC
                      ____________________________________________________________
consensus             CCCGGCTTTTCCCACCGCCCCTTCACATTGAAATCAGAATCAAGAAGAAGAAACCCATTC
 
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JMFF044K03+           CCCTCGGCATTCCCATCTTTATCACCAAGGCACGACAGCATTATGTCGCCCGAAGCAAGG
JMFF041M08+           CCCTCGGCATTCCCATCTTTATCACCAAGGCACGACAGCATTATGTCGCCCGAAGCAAGG
JMFS036F03+           CCCTCGGCATTCCCATCTTTATCACCAAGGCACGACAGCATTATGTCGCCCGAAGCAAGG
JMFF050K23+                                                               AAGCAAGG
JMFF035H02+                                          ACGACAGCATTATGTCGCCCGAAGCAAGG
JMFF035F08+                                     AAGGCACGACAGCATTATGTCGCCCGAAGCAAGG
JMFF003N24+                             TTATCACCAAGGCACGACAGCATTATGTCGCCCGAAGCAAGG
JMFF012E15+                                         CACGACAGCATTATGTCGCCCGAAGCAAGG
JMSF045M13+           CCCTCGGCATTCCCATCTTTATCACCAAGGCACGACAGCATTATGTCGCCCGAAGCAAGG
                      ____________________________________________________________
consensus             CCCTCGGCATTCCCATCTTTATCACCAAGGCACGACAGCATTATGTCGCCCGAAGCAAGG
 
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JMFF044K03+           CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCTCTACAATATCATCCGGTTCAACA
JMFF041M08+           CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCCCTACAATATCATCCGGTTCAACA
JMFS036F03+           CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCTCTACAATATCATCCGGTTCAACA
JMFF050K23+           CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCTCTACAATATCATCCGGTTCAACA
JMFF035H02+           CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCCCTACAATATCATCCGGTTCAACA
JMFF023K18+                                                 TACAATATCATCCGGTTCAACA
JMFF035F08+           CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCCCTACAATATCATCCGGTTCAACA
JMFF003N24+           CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCTNTACAATATCATCCGGTTCAACA
JMFF012E15+           CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCTCTACAATATCATCCGGTTCAACA
JMFF026D19+                          GGAAACGCCAATCCAGTCTTCTCTACAATATCATCCGGTTCAACA
JMSF045M13+           CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCTCTACAATATCATCCGGTTCAACA
                      ____________________________________________________________
consensus             CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCTCTACAATATCATCCGGTTCAACA
 
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JMFF044K03+           ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMFF041M08+           ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMFS036F03+           ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMFF050K23+           ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMFF035H02+           ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMFF023K18+           ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMFF035F08+           ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMFF003N24+           ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMFF012E15+           ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMFF026D19+           ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMSF045M13+           ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
                      ____________________________________________________________
consensus             ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
 
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JMFF044K03+           GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMFF041M08+           GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMFS036F03+           GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMFF050K23+           GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMFF035H02+           GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMFF023K18+           GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMFF035F08+           GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMFF003N24+           GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMFF012E15+           GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMFF026D19+           GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMSF045M13+           GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
                      ____________________________________________________________
consensus             GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
 
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JMFF044K03+           CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMFF041M08+           CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMFS036F03+           CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMFF050K23+           CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMFF035H02+           CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMFF023K18+           CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMFF035F08+           CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMFF003N24+           CTGCAGGAATTCCATCCCGAATGGCGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMFF012E15+           CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMFF026D19+           CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMSF045M13+           CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
                      ____________________________________________________________
consensus             CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
 
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JMFF044K03+           TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMFF041M08+           TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMFS036F03+           TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMFF050K23+           TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMFF035H02+           TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMFF023K18+           TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMFF035F08+           TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMFF003N24+           TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMFF012E15+           TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMFF026D19+           TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMSF045M13+           TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
                      ____________________________________________________________
consensus             TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
 
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JMFF044K03+           GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMFF041M08+           GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMFS036F03+           GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMFF050K23+           GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMFF035H02+           GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMFF023K18+           GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMFF035F08+           GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMFF003N24+           GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMFF012E15+           GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMFF026D19+           GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMSF045M13+           GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
                      ____________________________________________________________
consensus             GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
 
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JMFF044K03+           CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFF041M08+           CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFS036F03+           CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFF050K23+           CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFF035H02+           CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFF023K18+           CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFF035F08+           CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFF003N24+           CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFF012E15+           CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFF026D19+           CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFF018C01+                                     ATAGCCGGGCCCAGACTTGCAGCACCCACCCAAC
JMSF045M13+           CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
                      ____________________________________________________________
consensus             CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
 
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JMFF044K03+           TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
JMFF041M08+           TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
JMFS036F03+           TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTC                        
JMFF050K23+           TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
JMFF035H02+           TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
JMFF023K18+           TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
JMFF035F08+           TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
JMFF003N24+           TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
JMFF012E15+           TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
JMFF026D19+           TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
JMFF018C01+           TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATNTCACTTCTCCGGCCAGGA
JMSF045M13+           TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
                      ____________________________________________________________
consensus             TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
 
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JMFF044K03+           AAACCAGAGTCAAGGCTAAGAGTGATGTGTT                             
JMFF041M08+           AAACCAGAGTCAAGGCTAAGAGTGATGTGTTATCAGGAGGCCCCTACGGGAGGTTTTTTT
JMFF050K23+           AAACCAGAGTCAAGGCTAAGAGTGATGTGTTATCAGGAGGCCCCTACGGGAGGTTTTTTT
JMFF035H02+           AAACCAGAGTCAAGGCTAAGAGTGATGTGTTATCAGGAGGCCCCTACGGGAGGTTTTTTT
JMFF023K18+           AAACCAGAGTCAAGGCTAAGAGTGATGTGTT                             
JMFF035F08+           AAACCAGAGTCAAGGCTAAGAGTGATGTGTTATCAGGAGGCCCCTACGGGAGGTTTTTTT
JMFF003N24+           AAACCAGAGTCAAGGCTAAGAGTGATGTGTTAT                           
JMFF012E15+           AAACCAGAGTCAAGGCTAAGAGTGATGTGTTAT                           
JMFF026D19+           AAACCAGAGTCAAGGCTAAGAGTGATGTGTTATCAGGAGGCCCCTACGGGAGGTTTTTTT
JMFF018C01+           AAACCAGAGTCAAGGCTAAGAGTGATGTGTTATCAGGAGGCCCCTACGGGAGGTTTTTTT
JMSF045M13+           AAACCAGAGTCAAGGCTAAGAGTGATGTGTTATCAGGAGGCCCCTACGGGAGGTTTTTTT
                      ____________________________________________________________
consensus             AAACCAGAGTCAAGGCTAAGAGTGATGTGTTATCAGGAGGCCCCTACGGGAGGTTTTTTT
 
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JMFF041M08+           ATTCGT                                                      
JMFF050K23+           ATTCGTAAAAATAGTGAGACACCCCGGGCGAACTGCTTCTTCTTATAATACGACGACAC 
JMFF035H02+           ATTCGT                                                      
JMFF035F08+           ATTCGT                                                      
JMFF026D19+           ATTCGTAAAAAT                                                
JMFF018C01+           ANTNGTAAAAATAGTGAGACACCCCGGGCGAACTGCTTCT                    
JMSF045M13+           ATTCGTAAAAATAGTGAGACACCCCGGGCGAACTGCTTCTTCTTATAATACGACGACACC
                      ____________________________________________________________
consensus             ATTCGTAAAAATAGTGAGACACCCCGGGCGAACTGCTTCTTCTTATAATACGACGACACC