clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF003N24 | Sequence | 555 | 000955 (12) | ref|XP_011015557.1| | 2e-88 | PREDICTED: selenium-binding protein 1-like [Populus euphratica] | 700 | 004034 (10) | emb|CDP15102.1| | 1e-113 | unnamed protein product [Coffea canephora] |
JMFF012E15 | Sequence | 543 | 000955 (12) | ref|XP_011015557.1| | 2e-86 | PREDICTED: selenium-binding protein 1-like [Populus euphratica] | 751 | 004034 (10) | emb|CDP15102.1| | 1e-125 | unnamed protein product [Coffea canephora] |
JMFF018C01 | Sequence | 194 | 000955 (12) | ||||||||
JMFF023K18 | Sequence | 473 | 000955 (12) | ref|XP_011015557.1| | 7e-72 | PREDICTED: selenium-binding protein 1-like [Populus euphratica] | 628 | 004034 (10) | emb|CDP15102.1| | 5e-103 | unnamed protein product [Coffea canephora] |
JMFF026D19 | Sequence | 537 | 000955 (12) | ref|XP_011015557.1| | 1e-75 | PREDICTED: selenium-binding protein 1-like [Populus euphratica] | 745 | 004034 (10) | emb|CDP15102.1| | 3e-113 | unnamed protein product [Coffea canephora] |
JMFF035F08 | Sequence | 580 | 000955 (12) | ref|XP_011015557.1| | 1e-87 | PREDICTED: selenium-binding protein 1-like [Populus euphratica] | 724 | 004034 (10) | emb|CDP15102.1| | 8e-120 | unnamed protein product [Coffea canephora] |
JMFF035H02 | Sequence | 575 | 000955 (12) | ref|XP_011015557.1| | 5e-86 | PREDICTED: selenium-binding protein 1-like [Populus euphratica] | 721 | 004034 (10) | emb|CDP15102.1| | 4e-119 | unnamed protein product [Coffea canephora] |
JMFF041M08 | Sequence | 633 | 000955 (12) | ref|XP_011015557.1| | 7e-101 | PREDICTED: selenium-binding protein 1-like [Populus euphratica] | 611 | 004034 (10) | emb|CDP15102.1| | 3e-87 | unnamed protein product [Coffea canephora] |
JMFF044K03 | Sequence | 643 | 000955 (12) | ref|XP_011015557.1| | 3e-113 | PREDICTED: selenium-binding protein 1-like [Populus euphratica] | 579 | 004034 (10) | emb|CDP15102.1| | 8e-82 | unnamed protein product [Coffea canephora] |
JMFF050K23 | Sequence | 607 | 000955 (12) | ref|XP_011015557.1| | 1e-81 | PREDICTED: selenium-binding protein 1-like [Populus euphratica] | 566 | 004034 (10) | emb|CDP15102.1| | 2e-77 | unnamed protein product [Coffea canephora] |
JMFS036F03 | Sequence | 618 | 000955 (12) | ref|XP_011015557.1| | 1e-121 | PREDICTED: selenium-binding protein 1-like [Populus euphratica] | |||||
JMSF045M13 | Sequence | 778 | 000955 (12) | ref|XP_011015557.1| | 2e-119 | PREDICTED: selenium-binding protein 1-like [Populus euphratica] | 752 | 004034 (10) | emb|CDP15102.1| | 1e-133 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMFF044K03+ AGTGGACTGTGC
JMFS036F03+ TTGGTACCAAAAATCGTACCCGTACAGTGGACTGTGC
JMSF045M13+ ATCATCGTCTTGTGTCGAGGTTTGGTACCAAAAATCGTACCCGTACAGTGGACTGTGC
____________________________________________________________
consensus ATCATCGTCTTGTGTCGAGGTTTGGTACCAAAAATCGTACCCGTACAGTGGACTGTGC
. : . : . : . : . : . :
JMFF044K03+ CCCGGCTTTTCCCACCGCCCCTTCACATTGAAATCAGAATCAAGAAGAAGAAACCCATTC
JMFF041M08+ TCAGAATCAAGAAGAAGAAACCCATTC
JMFS036F03+ CCCGGCTTTTCCCACCGCCCCTTCACATTGAAATCAGAATCAAGAAGAAGAAACCCATTC
JMSF045M13+ CCCGGCTTTTCCCACCGCCCCTTCACATTGAAATCAGAATCAAGAAGAAGAAACCCATTC
____________________________________________________________
consensus CCCGGCTTTTCCCACCGCCCCTTCACATTGAAATCAGAATCAAGAAGAAGAAACCCATTC
. : . : . : . : . : . :
JMFF044K03+ CCCTCGGCATTCCCATCTTTATCACCAAGGCACGACAGCATTATGTCGCCCGAAGCAAGG
JMFF041M08+ CCCTCGGCATTCCCATCTTTATCACCAAGGCACGACAGCATTATGTCGCCCGAAGCAAGG
JMFS036F03+ CCCTCGGCATTCCCATCTTTATCACCAAGGCACGACAGCATTATGTCGCCCGAAGCAAGG
JMFF050K23+ AAGCAAGG
JMFF035H02+ ACGACAGCATTATGTCGCCCGAAGCAAGG
JMFF035F08+ AAGGCACGACAGCATTATGTCGCCCGAAGCAAGG
JMFF003N24+ TTATCACCAAGGCACGACAGCATTATGTCGCCCGAAGCAAGG
JMFF012E15+ CACGACAGCATTATGTCGCCCGAAGCAAGG
JMSF045M13+ CCCTCGGCATTCCCATCTTTATCACCAAGGCACGACAGCATTATGTCGCCCGAAGCAAGG
____________________________________________________________
consensus CCCTCGGCATTCCCATCTTTATCACCAAGGCACGACAGCATTATGTCGCCCGAAGCAAGG
. : . : . : . : . : . :
JMFF044K03+ CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCTCTACAATATCATCCGGTTCAACA
JMFF041M08+ CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCCCTACAATATCATCCGGTTCAACA
JMFS036F03+ CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCTCTACAATATCATCCGGTTCAACA
JMFF050K23+ CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCTCTACAATATCATCCGGTTCAACA
JMFF035H02+ CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCCCTACAATATCATCCGGTTCAACA
JMFF023K18+ TACAATATCATCCGGTTCAACA
JMFF035F08+ CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCCCTACAATATCATCCGGTTCAACA
JMFF003N24+ CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCTNTACAATATCATCCGGTTCAACA
JMFF012E15+ CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCTCTACAATATCATCCGGTTCAACA
JMFF026D19+ GGAAACGCCAATCCAGTCTTCTCTACAATATCATCCGGTTCAACA
JMSF045M13+ CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCTCTACAATATCATCCGGTTCAACA
____________________________________________________________
consensus CAATGAGCCGTGTGTGGAAACGCCAATCCAGTCTTCTCTACAATATCATCCGGTTCAACA
. : . : . : . : . : . :
JMFF044K03+ ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMFF041M08+ ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMFS036F03+ ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMFF050K23+ ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMFF035H02+ ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMFF023K18+ ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMFF035F08+ ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMFF003N24+ ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMFF012E15+ ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMFF026D19+ ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
JMSF045M13+ ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
____________________________________________________________
consensus ACTTTATACAGACTAGGAGCTTTCGGATCCTTTATTGTGTCAACTGCATATATCCGCCCC
. : . : . : . : . : . :
JMFF044K03+ GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMFF041M08+ GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMFS036F03+ GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMFF050K23+ GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMFF035H02+ GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMFF023K18+ GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMFF035F08+ GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMFF003N24+ GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMFF012E15+ GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMFF026D19+ GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
JMSF045M13+ GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
____________________________________________________________
consensus GATATTAGTGAAGGCAGGACGAGATATCTTCGAGTAGCAGATGAATCGCCATGGCAAGAA
. : . : . : . : . : . :
JMFF044K03+ CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMFF041M08+ CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMFS036F03+ CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMFF050K23+ CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMFF035H02+ CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMFF023K18+ CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMFF035F08+ CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMFF003N24+ CTGCAGGAATTCCATCCCGAATGGCGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMFF012E15+ CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMFF026D19+ CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
JMSF045M13+ CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
____________________________________________________________
consensus CTGCAGGAATTCCATCCCGAATGGTGCAGTTCATCGCCTAAGTGAGGCATTGGTAGCCTG
. : . : . : . : . : . :
JMFF044K03+ TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMFF041M08+ TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMFS036F03+ TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMFF050K23+ TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMFF035H02+ TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMFF023K18+ TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMFF035F08+ TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMFF003N24+ TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMFF012E15+ TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMFF026D19+ TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
JMSF045M13+ TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
____________________________________________________________
consensus TGGATTATCTTAGAAAATGTTGGTGAATTAGGATCAACATCAACAGTAGCCAGGTAATCA
. : . : . : . : . : . :
JMFF044K03+ GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMFF041M08+ GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMFS036F03+ GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMFF050K23+ GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMFF035H02+ GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMFF023K18+ GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMFF035F08+ GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMFF003N24+ GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMFF012E15+ GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMFF026D19+ GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
JMSF045M13+ GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
____________________________________________________________
consensus GGTTTCTCTATTCCTGTTCCTGAATAGACGCACGTGACATAAATGAGGGACTCCCGAGGA
. : . : . : . : . : . :
JMFF044K03+ CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFF041M08+ CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFS036F03+ CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFF050K23+ CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFF035H02+ CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFF023K18+ CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFF035F08+ CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFF003N24+ CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFF012E15+ CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFF026D19+ CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
JMFF018C01+ ATAGCCGGGCCCAGACTTGCAGCACCCACCCAAC
JMSF045M13+ CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
____________________________________________________________
consensus CCTTTCATGGCTTCCTTGGGGCTAGCATAGCCGGGCCCAGACTTGCAGCACCCACCCACC
. : . : . : . : . : . :
JMFF044K03+ TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
JMFF041M08+ TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
JMFS036F03+ TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTC
JMFF050K23+ TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
JMFF035H02+ TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
JMFF023K18+ TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
JMFF035F08+ TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
JMFF003N24+ TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
JMFF012E15+ TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
JMFF026D19+ TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
JMFF018C01+ TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATNTCACTTCTCCGGCCAGGA
JMSF045M13+ TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
____________________________________________________________
consensus TTGGGTTGCTCCGCCGCTACCGCCGTTACCGCCGTCGCCATCTCACTTCTCCGGCCAGGA
. : . : . : . : . : . :
JMFF044K03+ AAACCAGAGTCAAGGCTAAGAGTGATGTGTT
JMFF041M08+ AAACCAGAGTCAAGGCTAAGAGTGATGTGTTATCAGGAGGCCCCTACGGGAGGTTTTTTT
JMFF050K23+ AAACCAGAGTCAAGGCTAAGAGTGATGTGTTATCAGGAGGCCCCTACGGGAGGTTTTTTT
JMFF035H02+ AAACCAGAGTCAAGGCTAAGAGTGATGTGTTATCAGGAGGCCCCTACGGGAGGTTTTTTT
JMFF023K18+ AAACCAGAGTCAAGGCTAAGAGTGATGTGTT
JMFF035F08+ AAACCAGAGTCAAGGCTAAGAGTGATGTGTTATCAGGAGGCCCCTACGGGAGGTTTTTTT
JMFF003N24+ AAACCAGAGTCAAGGCTAAGAGTGATGTGTTAT
JMFF012E15+ AAACCAGAGTCAAGGCTAAGAGTGATGTGTTAT
JMFF026D19+ AAACCAGAGTCAAGGCTAAGAGTGATGTGTTATCAGGAGGCCCCTACGGGAGGTTTTTTT
JMFF018C01+ AAACCAGAGTCAAGGCTAAGAGTGATGTGTTATCAGGAGGCCCCTACGGGAGGTTTTTTT
JMSF045M13+ AAACCAGAGTCAAGGCTAAGAGTGATGTGTTATCAGGAGGCCCCTACGGGAGGTTTTTTT
____________________________________________________________
consensus AAACCAGAGTCAAGGCTAAGAGTGATGTGTTATCAGGAGGCCCCTACGGGAGGTTTTTTT
. : . : . : . : . : . :
JMFF041M08+ ATTCGT
JMFF050K23+ ATTCGTAAAAATAGTGAGACACCCCGGGCGAACTGCTTCTTCTTATAATACGACGACAC
JMFF035H02+ ATTCGT
JMFF035F08+ ATTCGT
JMFF026D19+ ATTCGTAAAAAT
JMFF018C01+ ANTNGTAAAAATAGTGAGACACCCCGGGCGAACTGCTTCT
JMSF045M13+ ATTCGTAAAAATAGTGAGACACCCCGGGCGAACTGCTTCTTCTTATAATACGACGACACC
____________________________________________________________
consensus ATTCGTAAAAATAGTGAGACACCCCGGGCGAACTGCTTCTTCTTATAATACGACGACACC