Contig 000948:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025E08Sequence578000948 (2)ref|XP_011087784.1|7e-48PREDICTED: uncharacterized protein LOC105169164 isoform X2 [Sesamum indicum]693004028 (4)
JMSF044N05Sequence720000948 (2)ref|XP_002276733.1|4e-77PREDICTED: uncharacterized protein LOC100266910 isoform X2 [Vitis vinifera] ref766004028 (4)ref|XP_009777788.1|1e-18PREDICTED: uncharacterized protein LOC104227268 isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044N05+           TTCCTACAAATGAACACTCATCCTGCATGCAGCTACGTTTCTTAGCATTCAGGTATGCAC
                      ____________________________________________________________
consensus             TTCCTACAAATGAACACTCATCCTGCATGCAGCTACGTTTCTTAGCATTCAGGTATGCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044N05+           GTGCAGGTTCAACCACAGTCCATCCTTTCACTTGCCCACGACAGAGTGGGCATGCAAGCT
                      ____________________________________________________________
consensus             GTGCAGGTTCAACCACAGTCCATCCTTTCACTTGCCCACGACAGAGTGGGCATGCAAGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044N05+           CTGTAATCTCACCTTTCTCAGCAGGCCAATCAGAAAACGGGGCAGGGGCAGGGGCAGGGG
                      ____________________________________________________________
consensus             CTGTAATCTCACCTTTCTCAGCAGGCCAATCAGAAAACGGGGCAGGGGCAGGGGCAGGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF025E08+                                                             ACTTTCGTGT
JMSF044N05+           CTGGGTTATTGATTGAACTTTGAAGAGATTGGCTTTGATTTAGTAATTTAACTTTCGTGT
                      ____________________________________________________________
consensus             CTGGGTTATTGATTGAACTTTGAAGAGATTGGCTTTGATTTAGTAATTTAACTTTCGTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF025E08+           AAGCTTTCTGGTACTGATCTAGGCAATTTGAATAACGGTAGCTAGTTCCGCACATGTAGG
JMSF044N05+           AAGCTTTCTGGTACTGATCTAGGCAATTTGAATAACGGTAGCTAGTTCCGCACATGTAGG
                      ____________________________________________________________
consensus             AAGCTTTCTGGTACTGATCTAGGCAATTTGAATAACGGTAGCTAGTTCCGCACATGTAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF025E08+           GGCGGCAGCCTTTGTCGTGGGAGGAGCACAGGAGAAGAACCGCATTGTGAGGATATTCCA
JMSF044N05+           GGCGGCAGCCTTTGTCGTGGGAGGAGCACAGGAGAAGAACCGCATTGTGAGGATATTCCA
                      ____________________________________________________________
consensus             GGCGGCAGCCTTTGTCGTGGGAGGAGCACAGGAGAAGAACCGCATTGTGAGGATATTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF025E08+           TGCATACTGAACATGTTGCATCTTCCCAGTCATTCTTAAACTTTTTAGAGCATTTCTTTT
JMSF044N05+           TGCATACTGAACATGTTGCATCTTCCCAGTCATTCTTAAACTTTTTAGAGCATTTCTTTT
                      ____________________________________________________________
consensus             TGCATACTGAACATGTTGCATCTTCCCAGTCATTCTTAAACTTTTTAGAGCATTTCTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF025E08+           GGATTGGGTCCCCTGATTGATTCACAGATGGCAAAGGGTATGGAGTTGGCCTACACTGTC
JMSF044N05+           GGATTGGGTCCCCTGATTGATTCACAGATGGCAAAGGGTATGGAGTTGGCCTACACTGTC
                      ____________________________________________________________
consensus             GGATTGGGTCCCCTGATTGATTCACAGATGGCAAAGGGTATGGAGTTGGCCTACACTGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF025E08+           GTGAGGTGATCCTGCGTCTTCCTCTGGTTCCCTTTGCCATGTCCTAAATTAATCGGAGAT
JMSF044N05+           GTGAGGTGATCCTGCGTCTTCCTCTGGTTCCCTTTGCCATGTCCTAAATTAATCGGAGAT
                      ____________________________________________________________
consensus             GTGAGGTGATCCTGCGTCTTCCTCTGGTTCCCTTTGCCATGTCCTAAATTAATCGGAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF025E08+           TTTCTTGAAGAAGACGGGTTGAATCAGAATCCTAGAAAGAGAAAAGTGGGTTGAGAGAGA
JMSF044N05+           TTTCTTGAAGAAGACGGGTTGAATCAGAATCCTAGAAAGAGAAAAGTGGGTTGAGAGAGA
                      ____________________________________________________________
consensus             TTTCTTGAAGAAGACGGGTTGAATCAGAATCCTAGAAAGAGAAAAGTGGGTTGAGAGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF025E08+           GAGAGAGCGAGGGGGGAAGGATTATGGGGTTTGTAATTCGTGCAGATGATTGAACTGGTT
JMSF044N05+           GAGAGAGCGAGGGGGGAAGGATTATGGGGTTTGTAATTCGTGCAGATGATTGAACTGGTT
                      ____________________________________________________________
consensus             GAGAGAGCGAGGGGGGAAGGATTATGGGGTTTGTAATTCGTGCAGATGATTGAACTGGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF025E08+           ACGGAAAAATCGAGCTTTCCCGTGAAAATTTAGAAGAGAGAGAATGGCAGAAAC      
JMSF044N05+           ACGGAAAAATCGAGCTTTCCCGTGAAAATTTAGAAGAGAGAGAATGGCAGAAACGGGAGC
                      ____________________________________________________________
consensus             ACGGAAAAATCGAGCTTTCCCGTGAAAATTTAGAAGAGAGAGAATGGCAGAAACGGGAGC