Contig 000947:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF044K21+                                               TGCACAAAAACTGGAACTGTAATA
                      ____________________________________________________________
consensus                                                 TGCACAAAAACTGGAACTGTAATA
 
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JMSF044K21+           TTTGTCCCTTGCGAAATACTTTGGTAACAATTATCTGAAGGGTTCCTACACGTTTGCCCA
                      ____________________________________________________________
consensus             TTTGTCCCTTGCGAAATACTTTGGTAACAATTATCTGAAGGGTTCCTACACGTTTGCCCA
 
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JMSF044K21+           GTGGGAATATTTATAGTCAATGGAGCCTCAACAATTGTGCCATTTGACAAATAGGAATCG
                      ____________________________________________________________
consensus             GTGGGAATATTTATAGTCAATGGAGCCTCAACAATTGTGCCATTTGACAAATAGGAATCG
 
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JMSF031L20+                     CAGAAGCAATAAAGACCTTCACACATGCAGCAGCCTCTGCTGAAGCTTCA
JMSF044K21+           TTTGGCACCCCAGAAGCAATAAAGACCTTCACACATGCAGCAGCCTCTGCTGAAGCTTCA
                      ____________________________________________________________
consensus             TTTGGCACCCCAGAAGCAATAAAGACCTTCACACATGCAGCAGCCTCTGCTGAAGCTTCA
 
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JMSF031L20+           CTGCTAACTGCTGGAGAAGCTTCCAATTCATATTCTAAATCACTATCATCATCCAGAGGT
JMSF044K21+           CTGCTAACTGCTGGAGAAGCTTCCAATTCATATTCTAAATCACTATCATCATCCAGAGGT
                      ____________________________________________________________
consensus             CTGCTAACTGCTGGAGAAGCTTCCAATTCATATTCTAAATCACTATCATCATCCAGAGGT
 
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JMSF031L20+           AATGCACTGTCATCCAGCCTATCAGCCAATCCATGGCGATAAGCCAAATGACGCCACAGC
JMSF044K21+           AATGCACTGTCATCCAGCCTATCAGCCAATCCATGGCGATAAGCCAAATGACGCCACAGC
                      ____________________________________________________________
consensus             AATGCACTGTCATCCAGCCTATCAGCCAATCCATGGCGATAAGCCAAATGACGCCACAGC
 
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JMSF031L20+           ATTTGGTACTCCCTAGCATTTGTAATCCCAGTGCTGCTCTTCTTCACCAACTCATTCCAA
JMSF014C06+                                                     TTCACCAACTCATTCCAA
JMSF044K21+           ATTTGGTACTCCCTAGCATTTGTAATCCCAGTGCTGCTCTTCTTCACCAACTCATTCCAA
                      ____________________________________________________________
consensus             ATTTGGTACTCCCTAGCATTTGTAATCCCAGTGCTGCTCTTCTTCACCAACTCATTCCAA
 
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JMSF031L20+           TCGATTTTCACCTCCGTAACCTGCGCCACCTCTCGCAACAATGCCAGCACTGTCGTCGCG
JMSF014C06+           TCGATTTTCACCTCCGTAACCTGCGCCACCTCTCGCAACAATGCCAGCACTGTCGTCGCG
JMSF044K21+           TCGATTTTCACCTCCGTAACCTGCGCCACCTCTCGCAACAATGCCAGCACTGTCGTCGCG
                      ____________________________________________________________
consensus             TCGATTTTCACCTCCGTAACCTGCGCCACCTCTCGCAACAATGCCAGCACTGTCGTCGCG
 
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JMSF031L20+           TTGTACCTCTGTAGAAGAGTAGAGATATCTTCTTCACTGACGGAGCACTTTTTCCGCTTA
JMSF014C06+           TTGTACCTCTGTAGAAGAGTAGAGATATCTTCTTCACTGACGGAGCACTTTTTCCGCTTA
JMSF044K21+           TTGTACCTCTGTAGAAGAGTAGAGATATCTTCTTCACTGACGGAGCACTTTTTCCGCTTA
                      ____________________________________________________________
consensus             TTGTACCTCTGTAGAAGAGTAGAGATATCTTCTTCACTGACGGAGCACTTTTTCCGCTTA
 
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JMSF031L20+           CCCGATTTCTCAACCATTTTTAACTCTCCGTATGACGTATGTGAGTATTTCTTTCTAAGA
JMSF014C06+           CCCGATTTCTCAACCATTTTTAACTCTCCGTATGACGTATGTGAGTATTTCTTTCTAAGA
JMSF044K21+           CCCGATTTCTCAACCATTTTTAACTCTCCGTATGACGTATGTGAGTATTTCTTTCTAAGA
                      ____________________________________________________________
consensus             CCCGATTTCTCAACCATTTTTAACTCTCCGTATGACGTATGTGAGTATTTCTTTCTAAGA
 
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JMSF031L20+           TTGGACTTTGTTTTCCCGCGAAACGGTTATGGAGCGGGGGAGGAGGGTTTTAGCGAAGAT
JMSF014C06+           TTGGACTTTGTTTTCCCGCGAAACGGTTATGGAGCGGGGGAGGAGGGTTTTAGCGAAGAT
JMSF044K21+           TTGGACTTTGTTTTCCCGCGAAACGGTTATGGAGCGGGGGAGGAGGGTTTTAGCGAAGAT
                      ____________________________________________________________
consensus             TTGGACTTTGTTTTCCCGCGAAACGGTTATGGAGCGGGGGAGGAGGGTTTTAGCGAAGAT
 
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JMSF031L20+           AGTAAAAACCCTAAGACGGAAAGGAGGATGATGACGTTTGCCGGTGACGGAGTAAAAAAG
JMSF014C06+           AGTAAAAACCCTAAGACGGAAAGGAGGATGATGACGTTTGCCGGTGACGGAGTAAAAAAG
JMSF044K21+           AGTAAAAACCCTAAGACGGAAAGGAGGATGATGACGTTTGCCGGTGACGGAGTAAAAAAG
                      ____________________________________________________________
consensus             AGTAAAAACCCTAAGACGGAAAGGAGGATGATGACGTTTGCCGGTGACGGAGTAAAAAAG
 
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JMSF031L20+           CGACCGGCTGTGGAAGAAAGATAAACGGATGTGTACCTCAAGTACCGGTGTGAGGGTGGG
JMSF014C06+           CGACCGGCTGTGGAAGAAAGATAAACGGATGTGTACCTCAAGTACCGGTGTGAGGGTGGG
JMSF044K21+           CGACCGGCTGTGGAAGAAAGATAAACGGATGTGTACCTCAAGTACCGGTGTGAGGGTGGG
                      ____________________________________________________________
consensus             CGACCGGCTGTGGAAGAAAGATAAACGGATGTGTACCTCAAGTACCGGTGTGAGGGTGGG
 
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JMSF031L20+           TGTGGAGACAGGCGCCGGGGACCGGGGTTTTGGGGGAAGAACGAGGAGGCCACTC     
JMSF014C06+           TGTGGAGACAGGCGCCGGGGACCGGGGTTTTGGGGGAAGAACGAGGAGGCCACTC     
JMSF044K21+           TGTGGAGACAGGCGCCGGGGACCGGGGTTTTGGGGGAAGAACGAGGAGGCCACTCGGTCC
                      ____________________________________________________________
consensus             TGTGGAGACAGGCGCCGGGGACCGGGGTTTTGGGGGAAGAACGAGGAGGCCACTCGGTCC