| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF034A15 | Sequence | 495 | 000945 (4) | ref|XP_011013609.1| | 8e-70 | PREDICTED: probable transporter mch1 [Populus euphratica] | 752 | 012576 (4) | ref|XP_009766430.1| | 238 | PREDICTED: uncharacterized protein LOC104217799 [Nicotiana sylvestris] |
| JMSF017D09 | Sequence | 231 | 000945 (4) | ref|XP_004248658.1| | 3e-09 | PREDICTED: probable transporter mch1 [Solanum lycopersicum] | 784 | 012576 (4) | emb|CDO96930.1| | 3e-76 | unnamed protein product [Coffea canephora] |
| JMSF035F16 | Sequence | 658 | 000945 (4) | ref|XP_011092895.1| | 1e-114 | PREDICTED: probable transporter mch1 [Sesamum indicum] | 697 | 012576 (4) | emb|CDO96930.1| | 2e-83 | unnamed protein product [Coffea canephora] |
| JMSF044J01 | Sequence | 730 | 000945 (4) | ref|XP_011092895.1| | 4e-123 | PREDICTED: probable transporter mch1 [Sesamum indicum] | 812 | 012576 (4) | ref|XP_004248658.1| | 1e-131 | PREDICTED: probable transporter mch1 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMSF044J01+ CTGCGGCGGT
____________________________________________________________
consensus CTGCGGCGGT
. : . : . : . : . : . :
JMSF035F16+ GGAAAAAAACGGCGGCGAGGCAAACAACAAAAGGGAC
JMSF044J01+ GGACGACGGCGGGACTTCACGGAGGAAAAAAACGGCGGCGAGGCAAACAACAAAAGGGAC
____________________________________________________________
consensus GGACGACGGCGGGACTTCACGGAGGAAAAAAACGGCGGCGAGGCAAACAACAAAAGGGAC
. : . : . : . : . : . :
JMSF035F16+ GACCGCGAGCATGAGCAAGAATTTTGCAGGGTCATCCGCGAAGAGAGCGGAGCAGAGGTC
JMSF044J01+ GACCGCGAGCATGAGCAAGAATTTTGCAGGGTCATCCGCGAAGAGAGCGGAGCAGAGGTC
____________________________________________________________
consensus GACCGCGAGCATGAGCAAGAATTTTGCAGGGTCATCCGCGAAGAGAGCGGAGCAGAGGTC
. : . : . : . : . : . :
JMSF035F16+ AGTGAAAATGGCGGTACTCAAACCGACGTAACCTTTCAAGATCCCGGAGACGGGACCCCT
JMSF044J01+ AGTGAAAATGGCGGTACTCAAACCGACGTAACCTTTCAAGATCCCGGAGACGGGACCCCT
____________________________________________________________
consensus AGTGAAAATGGCGGTACTCAAACCGACGTAACCTTTCAAGATCCCGGAGACGGGACCCCT
. : . : . : . : . : . :
JMSF035F16+ GTTTTTCCTGAAATTGCGGATGCATGTAACCAGGATGGCGGTGTTCATCCAAGTAGTGCT
JMFF034A15+ GTTCATCCAAGTAGTGCT
JMSF044J01+ GTTTTTCCTGAAATTGCGGATGCATGTAACCAGGATGGCGGTGTTCATCCAAGTAGTGCT
____________________________________________________________
consensus GTTTTTCCTGAAATTGCGGATGCATGTAACCAGGATGGCGGTGTTCATCCAAGTAGTGCT
. : . : . : . : . : . :
JMSF035F16+ GTTGCCTCCCATACACAGAAAAATGCACATGGCCCAATAAGGCAGAGGCTGGATGCGGCC
JMFF034A15+ GTTGCCTCCCATACACAGAAAAATGCACATGGCCCAATAAGGCAGAGGCTGGATGCGGCC
JMSF044J01+ GTTGCCTCCCATACACAGAAAAATGCACATGGCCCAATAAGGCAGAGGCTGGATGCGGCC
____________________________________________________________
consensus GTTGCCTCCCATACACAGAAAAATGCACATGGCCCAATAAGGCAGAGGCTGGATGCGGCC
. : . : . : . : . : . :
JMSF035F16+ GCTCACCACCAGCCATTGGACGCCGTAGCCTATTAAGCCTTCGACGGAGCCGATGAGGAG
JMFF034A15+ GCTCACCACCAGCCATTGGACGCCGTAGCCTATTAAGCCTTCGACGGAGCCGATGAGGAG
JMSF044J01+ GCTCACCACCAGCCATTGGACGCCGTAGCCTATTAAGCCTTCGACGGAGCCGATGAGGAG
____________________________________________________________
consensus GCTCACCACCAGCCATTGGACGCCGTAGCCTATTAAGCCTTCGACGGAGCCGATGAGGAG
. : . : . : . : . : . :
JMSF035F16+ AATAACGGGAGTGGACAAGCGGTCGGAGGCGATGCCGGCGAGGAGGCCAAAGGCTTTCCC
JMFF034A15+ AATAACGGGAGTGGACAAGCGGTCGGAGGCGATGCCGGCGAGGAGGCCAAAGGCTTTCCC
JMSF044J01+ AATAACGGGAGTGGACAAGCGGTCGGAGGCGATGCCGGCGAGGAGGCCAAAGGCTTTCCC
____________________________________________________________
consensus AATAACGGGAGTGGACAAGCGGTCGGAGGCGATGCCGGCGAGGAGGCCAAAGGCTTTCCC
. : . : . : . : . : . :
JMSF035F16+ GACGTCTTTAGCCACGGAGAGGTTGTTGAGTTGGAGCTGAGTGAGGGCCATGAGGGTCTT
JMFF034A15+ GACGTCTTTAGCCACGGAGAGGTTGTTGAGTTGGAGCTGAGTGAGGGCCATGAGGGTCTT
JMSF044J01+ GACGTCTTTAGCCACGGAGAGGTTGTTGAGTTGGAGCTGAGTGAGGGCCATGAGGGTCTT
____________________________________________________________
consensus GACGTCTTTAGCCACGGAGAGGTTGTTGAGTTGGAGCTGAGTGAGGGCCATGAGGGTCTT
. : . : . : . : . : . :
JMSF035F16+ GAGGGCATCGGAGTAGTTAGAGAAGGTGTAATTGTTGCCGGAGATGGCTTGGACCCAAAC
JMFF034A15+ GAGGGCATCGGAGTAGTTAGAGAAGGTGTAATTGTTGCCGGAGATGGCTTGGACCCAAAC
JMSF017D09+ GAGTAGTTAGAGAAGGTGTAATTGTTGCCGGAGATGGCTTGGACCCAAAC
JMSF044J01+ GAGGGCATCGGAGTAGTTAGAGAAGGTGTAATTGTTGCCGGAGATGGCTTGGACCCAAAC
____________________________________________________________
consensus GAGGGCATCGGAGTAGTTAGAGAAGGTGTAATTGTTGCCGGAGATGGCTTGGACCCAAAC
. : . : . : . : . : . :
JMSF035F16+ GGCGGTCACAAAGCCAATCCATTTACTGGCCGTTGGCGAAGTGGAAGAGACTCCGAATCC
JMFF034A15+ GGCGGTCACAAAGCCAATCCATTTACTGGCCGTTGGCGAAGTGGAAGAGACTCCGAATCC
JMSF017D09+ GGCGGTCACAAAGCCAATCCATTTACTGGCCGTTGGCGAAGTGGAAGAGACTCCGAATCC
JMSF044J01+ GGCGGTCACAAAGCCAATCCATTTACTGGCCGTTGGCGAAGTGGAAGAGACTCCGAATCC
____________________________________________________________
consensus GGCGGTCACAAAGCCAATCCATTTACTGGCCGTTGGCGAAGTGGAAGAGACTCCGAATCC
. : . : . : . : . : . :
JMSF035F16+ CATCAAAATCAACGGACAAAGGTCTTTGGGGAATACAGAATAGAAAGGAAAGGGTAACAA
JMFF034A15+ CATCAAAATCAACGGACAAAGGTCTTTGGGGAATACAGAATAGAAAGGAAAGGGTAACAA
JMSF017D09+ CATCAAAATCAACGGACAAAGGTCTTTGGGGAATACAGAATAGAAAGGAAAGGGTAACAA
JMSF044J01+ CATCAAAATCAACGGACAAAGGTCTTTGGGGAATACAGAATAGAAAGGAAAGGGTAACAA
____________________________________________________________
consensus CATCAAAATCAACGGACAAAGGTCTTTGGGGAATACAGAATAGAAAGGAAAGGGTAACAA
. : . : . : . : . : . :
JMSF035F16+ TTGAGGCGTGGCAAATGGGC
JMFF034A15+ TTGAGGCGTGGCAAATGGGCTAGTTGGTTGTTAGTAAC
JMSF017D09+ TTGAGGCGTGGCAAATGGGCTAGTTGGTTGTTAGTAAC
JMSF044J01+ TTGAGGCGTGGCAAATGGGCTAGTTGGTTGTTAGTAACAGGTTATTATTATAGGACTTCC
____________________________________________________________
consensus TTGAGGCGTGGCAAATGGGCTAGTTGGTTGTTAGTAACAGGTTATTATTATAGGACTTCC