Contig 000942:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF036B15-                                    CTTGGACGATAATAATATTGGAACATCTGAATGC
                      ____________________________________________________________
consensus                                       CTTGGACGATAATAATATTGGAACATCTGAATGC
 
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JMSF008P19+                                     ATGCCAGAATCTCAGCTCCAATTCATTATCGGCA
rJMSF036B15-          ATACGCTTTCAGGAAAAGAGAAAGATATGCCAGAATCTCAGCTCCAATTCATTATCGGCA
                      ____________________________________________________________
consensus             ATACGCTTTCAGGAAAAGAGAAAGATATGCCAGAATCTCAGCTCCAATTCATTATCGGCA
 
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JMSF008P19+           ACGTACAGCGCTGAAAACGCCATGGACAATGCGCATCAGAGACTCTAATTTATTGCCTT 
rJMSF036B15-          ACGTACAGCGCTGAAAACGCCATGGACAATGCGCATCAGAGACTCTAATTTATTGCCTTC
                      ____________________________________________________________
consensus             ACGTACAGCGCTGAAAACGCCATGGACAATGCGCATCAGAGACTCTAATTTATTGCCTTC
 
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rJMSF036B15-          AAGGAACCGAATGACAAAAAAATAGAACTCAAAATACTTGGGCAAATTTATGCGTGTCGG
                      ____________________________________________________________
consensus             AAGGAACCGAATGACAAAAAAATAGAACTCAAAATACTTGGGCAAATTTATGCGTGTCGG
 
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rJMSF036B15-          AACGTCTGAATGCATACACTTTCTGGAAAACAGAAAGATACGCTAGAATCTCAGCTCCGA
                      ____________________________________________________________
consensus             AACGTCTGAATGCATACACTTTCTGGAAAACAGAAAGATACGCTAGAATCTCAGCTCCGA
 
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rJMSF036B15-          TTCATTATCGGCAACGTACAGCGGCTTAACGGTAAAAGAAAGGAATGCCAGAATCTCAGC
JMSF044C07+                                  GCTTAACGGTAAAAGAAAGGAATGCCAGAATCTCAGC
                      ____________________________________________________________
consensus             TTCATTATCGGCAACGTACAGCGGCTTAACGGTAAAAGAAAGGAATGCCAGAATCTCAGC
 
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rJMSF036B15-          TCCATTTCATTATCGGCAACGTACAGCGCTGAAAACGCCATGGACAAAGCGCATCAGAGA
JMFF042D06+                          GCAACGTACAGCGCTGAAAACGCCATGGACAAAGCGCATCAGAGA
JMSF044C07+           TCCATTTCATTATCGGCAACGTACAGCGCTGAAAACGCCATGGACAAAGCGCATCAGAGA
                      ____________________________________________________________
consensus             TCCATTTCATTATCGGCAACGTACAGCGCTGAAAACGCCATGGACAAAGCGCATCAGAGA
 
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rJMSF036B15-          CTCTAATTTATTGCCTTACCAACAGCAAAACTTCATCCCACATCAACCCCTAAAAACAAT
JMFF042D06+           CTCTAATTTATTGCCTTACCAACAGCAAAACTTCATCCCACATCAACCCCTAAAAACAAT
JMSF036B15+                                                   CATCAACCCCTAAAAACAAT
JMSF044C07+           CTTTAATTTATTGCCTTACCAACAGCAAAACTTCATCCCACATCNACCCCTAAAAACAAT
                      ____________________________________________________________
consensus             CTCTAATTTATTGCCTTACCAACAGCAAAACTTCATCCCACATCAACCCCTAAAAACAAT
 
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rJMSF036B15-          AGCTAACGAAAACGCTAGAATGGGAGTAAATTGCAGATCGCCGGTGGCGATGTGCAGGCC
JMFF042D06+           AGCTAACGAAAACGCTAGAATGGGAGTAAATTGCAGATCGCCGGTGGCGATGTGCAGGCC
JMSF036B15+           AGCTAACGAAAACGCTAGAATGGGAGTAAATTGCAGATCGCCGGTGGCGATGTGCNGGCC
JMSF044C07+           AGCTAACGAAAACGCTAGAATGGGAGTAAATTGCAGATCNCCGGTGGCGATGTGCAGGCC
                      ____________________________________________________________
consensus             AGCTAACGAAAACGCTAGAATGGGAGTAAATTGCAGATCGCCGGTGGCGATGTGCAGGCC
 
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rJMSF036B15-          TCCGAAGAGTGTAGAAAGTCGGCAAGCGTAAATCCCCTTTCGGACGCCGGGGAATCCTAA
JMFF042D06+           TCCGAAGAGTGTAGAAAGTCGGCAAGCGTAAATCCCCTTTCGGACGCCGGGGAATCCTAA
JMSF036B15+           TCCGAAGAGTGTAGAAAGTCGGCAAGCGTAAATCCCCTTTCGGACGCCGGGGAATCCTAA
JMSF044C07+           TCCGAAGAGTGTAGAAAGTCGGCAAGCGTAAATCCCCTTTCGGACGCCGGGGAATCCTAA
                      ____________________________________________________________
consensus             TCCGAAGAGTGTAGAAAGTCGGCAAGCGTAAATCCCCTTTCGGACGCCGGGGAATCCTAA
 
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rJMSF036B15-          GAACACCAATTGGGCGCTCTTAGCCTTTAGATCTTGACCCGTCGAGAGAGGATTATTGAT
JMFF042D06+           GAACACCAATTGGGCGCTCTTAGCCTTTAGATCTTGACCCGTCGAGAGAGGATTATTGAT
JMSF036B15+           GAACNCCAATTGGGCGCTNTTAGCCTTTAGATCTTGACCCGTCGAGAGAGGATTATTGAT
JMSF053E23+                                            TTGACCCGTCGAGAGAGGATTATTGAT
JMSF044C07+           GAACNCCAATTGGGCGCTNTTAGCCTTTAGATCTTGACCCGTCGAGAGAGGATTATTGAT
                      ____________________________________________________________
consensus             GAACACCAATTGGGCGCTCTTAGCCTTTAGATCTTGACCCGTCGAGAGAGGATTATTGAT
 
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rJMSF036B15-          GCACGGATGCGATTTCACTGTCTCCNATGCAGCGGCAGCGGATAAAGAGCTCCAA     
JMFF042D06+           GCACGGATGCGATTTCACTGTCTCCAATGCAGCGGCAGCGGATAAAGAGCTCCAAAGCGA
JMSF036B15+           GCNCGGATGCGATTTCNCTGTNTCCAATGCAGCGGCAGCGGATAAAGAGCTCCAAAGCGA
JMSF053E23+           GCACGGATGCGATTTCACTGTNTCCAATGCAGCGGCAGCGGATAAAGAGCTCCAAAGNGN
JMSF044C07+           GCNCGGATGCGATTTCNCTGTCTCCAATGCAGCGGCAGCGGATAAAGAGCTCCAAAGCGA
                      ____________________________________________________________
consensus             GCACGGATGCGATTTCACTGTCTCCAATGCAGCGGCAGCGGATAAAGAGCTCCAAAGCGA
 
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JMFF042D06+           TGAGAATGAGGATAAGTAGGGAAGAAATTTTTGAACATCAAAATCTACAGGAGACTATTT
JMSF036B15+           TGAGAATGAGGATAAGTAGGGAAGAAATTTTTGAACNTCAAAATNTACNGGNGACTATTT
JMSF053E23+           TGNGAATGAGGNTAAGTAGGGAAGAAATTTTTGAACNTCAAAATNTACNGGNGACTATTT
JMSF044C07+           TGAGAATGAGGATAAGTAGGGAAGAAATTTTTGAACATCAAAATTTACNGGAGNCTATTT
                      ____________________________________________________________
consensus             TGAGAATGAGGATAAGTAGGGAAGAAATTTTTGAACATCAAAATTTACAGGAGACTATTT
 
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JMFF042D06+           CCAGAAAATTAACAGAAAAAAAAAATCAAAAGAAATATGTTAAGAAACAAAACATATATG
JMSF036B15+           CCNGAAAATTAACNGAAAAAAAAAATCAAAAGAAATATGTTAAGAAACAAAACATATATG
JMSF053E23+           CCNGAAAATTANCNGAAAAAAAAAATCAAAAGAAATATGTTAAGAAACAAAACATATATG
JMSF044C07+           CCAGAAAATTAACAGAAAAAAAAAATCAAAAGAAATATGTTAAGAAACAAAACATATATG
                      ____________________________________________________________
consensus             CCAGAAAATTAACAGAAAAAAAAAATCAAAAGAAATATGTTAAGAAACAAAACATATATG
 
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JMFF042D06+           GCTCAGCGAGTAAGAATTGAATCAATAAGCTATAATCAATAGCTTTCGTAGTTTGATGGT
JMSF036B15+           GCTCAGCGAGTAAGAATTGAATCAATAAGCTATAATCAATAGATTTCGTAGTTTGATGGT
JMSF053E23+           GCTCAGCGAGTAAGAATTGAATCAATAAGCTATAATCAATAGCTTTCGTAGTTTGATGGT
JMSF044C07+           GCTCAGCGAGTAAGAATTGAATCAATAAGCTATAATCAATAGCTTTCGTAGTTTGATGGT
                      ____________________________________________________________
consensus             GCTCAGCGAGTAAGAATTGAATCAATAAGCTATAATCAATAGCTTTCGTAGTTTGATGGT
 
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JMFF042D06+           ATTATACTTCAGACATCACAGCCACAAAAACTCATCGGAAGCGAAGAAGAAAGATGCTAA
JMSF036B15+           ATTATACTTCAGACATCACAGCCACAAAAACTCATCGGAAGCGAAGAAGAAAGATGCTAA
JMSF053E23+           ATTATACTTCAGACATCACAGCCACAAAAACTCATCGGAAGCGAAGAAGAAAGATGCTAA
JMSF044C07+           ATTATACTTCAGACATCACAGCCACAAAAACTCATCGGAAGCGAAGAAGAAAGATGCTAA
                      ____________________________________________________________
consensus             ATTATACTTCAGACATCACAGCCACAAAAACTCATCGGAAGCGAAGAAGAAAGATGCTAA
 
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JMFF042D06+           CACTACAAACAAAAGCTAGAAAGAGTGAGGCGAAGAGAATAGCGGAACCCT         
JMSF036B15+           CACTACAAACAAAAGCTAGAAAGAGTGAGGCGAAGAGAATAGCGGAACCCTAATTTGA  
JMSF053E23+           CACTACAAACAAAAGCTAGAAAGAGTGAGGCGAAGAGAATAGCGGAACCCTAATTTGA  
JMSF044C07+           CACTACAAACAAAAGCTAGAAAGAGTGAGGCGAAGAGAATAGCGGAACCCTAATTTGACC
                      ____________________________________________________________
consensus             CACTACAAACAAAAGCTAGAAAGAGTGAGGCGAAGAGAATAGCGGAACCCTAATTTGACC