Contig 000935:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013A17Sequence219000935 (2)764001461 (2)ref|XP_007033651.1|6e-110BTB and TAZ domain protein 3 isoform 1 [Theobroma cacao] gb|EOY04577.1| BTB and
JMSF043G23Sequence644000935 (2)ref|XP_009780836.1|2e-43PREDICTED: BTB/POZ and TAZ domain-containing protein 3 [Nicotiana sylvestris] r744001461 (2)ref|XP_007033651.1|7e-83BTB and TAZ domain protein 3 isoform 1 [Theobroma cacao] gb|EOY04577.1| BTB and

Alignment

This contig is upended


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JMSF043G23+                           TTCATCATAACTGGAGGAATAAAGGAAACGGATGAAGATGAAGA
                      ____________________________________________________________
consensus                             TTCATCATAACTGGAGGAATAAAGGAAACGGATGAAGATGAAGA
 
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JMSF043G23+           CAGCATCATAAGGCATGCCCGGGATCATTATATATCTGATCCCATTATTCGCCTTAGATT
                      ____________________________________________________________
consensus             CAGCATCATAAGGCATGCCCGGGATCATTATATATCTGATCCCATTATTCGCCTTAGATT
 
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JMSF043G23+           GCTGCAGGAAATTCCCCAATACTGGTGAAGCAACACTCAGAAGACTAGAATGAGCTGGAA
                      ____________________________________________________________
consensus             GCTGCAGGAAATTCCCCAATACTGGTGAAGCAACACTCAGAAGACTAGAATGAGCTGGAA
 
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JMSF043G23+           TAATAGACCCATCCTCTGTCATGATATGTACATCTGCTCCATATCCTTCCACGAAGAGTT
                      ____________________________________________________________
consensus             TAATAGACCCATCCTCTGTCATGATATGTACATCTGCTCCATATCCTTCCACGAAGAGTT
 
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JMSF043G23+           TGTCCCACGTATCTTTCACATTCTTCAGGATGCAACAAGAATCAGCAAGCCCTCTACGAG
                      ____________________________________________________________
consensus             TGTCCCACGTATCTTTCACATTCTTCAGGATGCAACAAGAATCAGCAAGCCCTCTACGAG
 
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JMSF043G23+           CACTGTCTCTTGAGCAGACTTTAGGAGGCGGTGGAGGAGGTTTTGGAACTTGACGCCTAC
                      ____________________________________________________________
consensus             CACTGTCTCTTGAGCAGACTTTAGGAGGCGGTGGAGGAGGTTTTGGAACTTGACGCCTAC
 
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JMSF043G23+           AACAAACGGGAGACTTGGGCTCCTCCTCGACAAAAAGTAAAGTGCCTTCTGAATCAGTTC
                      ____________________________________________________________
consensus             AACAAACGGGAGACTTGGGCTCCTCCTCGACAAAAAGTAAAGTGCCTTCTGAATCAGTTC
 
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JMSF013A17+                     TATGTTGAAAGTCCCATCAAAGGATTCAATGGCCGAGGATGGACATGAAC
JMSF043G23+           CCTCTACGCTTATGTTGAAAGTCCCATCAAAGGATTCAATGGCCGAGGATGGACATGAAC
                      ____________________________________________________________
consensus             CCTCTACGCTTATGTTGAAAGTCCCATCAAAGGATTCAATGGCCGAGGATGGACATGAAC
 
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JMSF013A17+           TATCACTGTCTGATGAAGCCATATGATACTAAGTTGAAATGTAGTATCAAGAAACAAATT
JMSF043G23+           TATCACTGTCTGATGAAGCCATATGATACTAAGTTGAAATGTAGTATCAAGAAACAAATT
                      ____________________________________________________________
consensus             TATCACTGTCTGATGAAGCCATATGATACTAAGTTGAAATGTAGTATCAAGAAACAAATT
 
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JMSF013A17+           TCACAAGAACTGGAATTAAAACTTGCCTACACAGATTGTATAGTTAATAGTTTTTTGGGA
JMSF043G23+           TCACAAGAACTGGAATTAAAACTTGCCTACACAGATTGTATAGTTAATAGTTTTTTGGGA
                      ____________________________________________________________
consensus             TCACAAGAACTGGAATTAAAACTTGCCTACACAGATTGTATAGTTAATAGTTTTTTGGGA
 
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JMSF013A17+           GACGGGCAAAAAGCGAACGAAGCGGATTGTATAGAGAAGGAGCAC               
JMSF043G23+           GACGGGCAAAAAGCGAACGAAGCGGATTGTATAGAGAAGGAGCACGACACGAGGATTCCC
                      ____________________________________________________________
consensus             GACGGGCAAAAAGCGAACGAAGCGGATTGTATAGAGAAGGAGCACGACACGAGGATTCCC