Contig 000934:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF050C14Sequence585000934 (3)ref|XP_009762857.1|1e-61PREDICTED: NAC transcription factor 25 isoform X1 [Nicotiana sylvestris]583000934 (3)ref|XP_009762857.1|1e-30PREDICTED: NAC transcription factor 25 isoform X1 [Nicotiana sylvestris]
JMSF043F19Sequence744000934 (3)ref|XP_009622296.1|8e-18PREDICTED: NAC transcription factor 25 isoform X2 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF050C14-                                                  ACCCTGGAGAGTTTTTTTTT
                      ____________________________________________________________
consensus                                                     ACCCTGGAGAGTTTTTTTTT
 
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rJMFF050C14-          TTTTTTCCGAAACATATACTGCATTTAATTAACTTTTATAAGGTTTTTTTTTTTTGTTAC
                      ____________________________________________________________
consensus             TTTTTTCCGAAACATATACTGCATTTAATTAACTTTTATAAGGTTTTTTTTTTTTGTTAC
 
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rJMFF050C14-          ATAAATTTCTGCTAAGAAGAACAAAACATATATATATGAAGAAACAGTAGCAGTACACTA
                      ____________________________________________________________
consensus             ATAAATTTCTGCTAAGAAGAACAAAACATATATATATGAAGAAACAGTAGCAGTACACTA
 
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rJMFF050C14-          GGTGGGCAAATGCAATATAATGCCATTTAGATCCTAAGCTTATGGGATCTAATTAGCTTA
                      ____________________________________________________________
consensus             GGTGGGCAAATGCAATATAATGCCATTTAGATCCTAAGCTTATGGGATCTAATTAGCTTA
 
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rJMFF050C14-          ATTAATATAATGCTGATTGAGTATCTTAATGTGGCAGACTAATCTCATCAAGATCATCTA
                      ____________________________________________________________
consensus             ATTAATATAATGCTGATTGAGTATCTTAATGTGGCAGACTAATCTCATCAAGATCATCTA
 
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rJMFF050C14-          GCGACAGGAAAACTTCATCCAAACATGAAAGCTCCGTCCCATCATCGCCGCCGCCGCCGT
                      ____________________________________________________________
consensus             GCGACAGGAAAACTTCATCCAAACATGAAAGCTCCGTCCCATCATCGCCGCCGCCGCCGT
 
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rJMFF050C14-          TATCATAGTTTCCCTCGAACACCCGACAGATTACCCATTTGCTATAATCGATCTTGGAAT
JMFF050C14+                                  CGACAGATTACCCATNTGCTATAATCGATCTGNGAAT
                      ____________________________________________________________
consensus             TATCATAGTTTCCCTCGAACACCCGACAGATTACCCATTTGCTATAATCGATCTTGGAAT
 
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rJMFF050C14-          GGCGACTCGATCGTCTGGAGGATGATCTGGAGCTAGTGGAAGCGGAATAATCAGAGAGGC
JMFF050C14+           GGCGACTCGATCGTCTGGAGGATGATCTGGAGCTAGTGGAAGCGGAATAATCAGAGAGGC
                      ____________________________________________________________
consensus             GGCGACTCGATCGTCTGGAGGATGATCTGGAGCTAGTGGAAGCGGAATAATCAGAGAGGC
 
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rJMFF050C14-          GGTATTCCTGCATTACCCAATCGGTTTTGTCGCCCTCCGGCGGCTCGCCGACGTAAAAAG
JMFF050C14+           GGTATTCCTGCATTACCCAATCGGTTTTGTCGCCCTCCGGCGGCTCGCCGACGTAAAAAG
                      ____________________________________________________________
consensus             GGTATTCCTGCATTACCCAATCGGTTTTGTCGCCCTCCGGCGGCTCGCCGACGTAAAAAG
 
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rJMFF050C14-          CGTAGTATTTCTTCATGCCCACTTTCTGGCCGGCGCCGCCGCCGGAGCTGGAGAAGATTG
JMFF050C14+           CGTAGTATTTCTTCATGCCCACTTTCTGGCCGGCGCCGCCGCCGGAGCTGGAGAAGATTG
                      ____________________________________________________________
consensus             CGTAGTATTTCTTCATGCCCACTTTCTGGCCGGCGCCGCCGCCGGAGCTGGAGAAGATTG
 
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rJMFF050C14-          GCTCGTCCACCCCTAATGGCTTC                                     
JMFF050C14+           GCTCGTCCACCCCTAATGGCTTCCAGAATCCGTTCTCCGTCATTCTTCTCGATGTTCTTC
                      ____________________________________________________________
consensus             GCTCGTCCACCCCTAATGGCTTCCAGAATCCGTTCTCCGTCATTCTTCTCGATGTTCTTC
 
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JMFF050C14+           TGCTGTAAAAATACCATTTCCTCCCCTCCGCCATGGCTTTCCCGTCTAAGTCCCATGGAT
JMSF043F19+                                                    CCGTCTAAGTCCCATGGAT
                      ____________________________________________________________
consensus             TGCTGTAAAAATACCATTTCCTCCCCTCCGCCATGGCTTTCCCGTCTAAGTCCCATGGAT
 
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JMFF050C14+           CGTAAGGGTAGAGGTCGAGATCGGGAATGACGTCAGGGTGGCACGGCAGCAGCGCCGCCT
JMSF043F19+           CGTAAGGGTAGAGGTCGAGATCGGGAATGACGTCAGGGTGGCACGGCAGCAGCGCCGCCT
                      ____________________________________________________________
consensus             CGTAAGGGTAGAGGTCGAGATCGGGAATGACGTCAGGGTGGCACGGCAGCAGCGCCGCCT
 
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JMFF050C14+           TGCGGTGGAGGAAATGCACCACCAGCTCCTCATCCGAGGGGTAGAACCGAAAGCCCGGCG
JMSF043F19+           TGCGGTGGAGGAAATGCACCACCAGCTCCTCATCCGAGGGGTAGAACCGAAAGCCCGGCG
                      ____________________________________________________________
consensus             TGCGGTGGAGGAAATGCACCACCAGCTCCTCATCCGAGGGGTAGAACCGAAAGCCCGGCG
 
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JMFF050C14+           GGAGATTAACGTTGTTATCCCCCATATATGTATCGTATATACACAGAGTATATATATGTG
JMSF043F19+           GGAGATTAACGTTGTTATCCCCCATATATGTATCGTATATACACAGAGTATATATATGTG
                      ____________________________________________________________
consensus             GGAGATTAACGTTGTTATCCCCCATATATGTATCGTATATACACAGAGTATATATATGTG
 
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JMFF050C14+           TATGTATAGCTCCGATCAGGAAGAAATGAAGGTGGCCGGAGAAGATATATGTATTATCGG
JMSF043F19+           TATGTATAGCTCCGATCAGGAAGAAATGAAGGTGGCCGGAGAAGATATATGTATTATCGG
                      ____________________________________________________________
consensus             TATGTATAGCTCCGATCAGGAAGAAATGAAGGTGGCCGGAGAAGATATATGTATTATCGG
 
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JMFF050C14+           CGC                                                         
JMSF043F19+           CGCAGAGAGAGGATTAATAAAGAAGCTATGGCGGGTGATATTTATAGGGAGATGAGACAG
                      ____________________________________________________________
consensus             CGCAGAGAGAGGATTAATAAAGAAGCTATGGCGGGTGATATTTATAGGGAGATGAGACAG
 
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JMSF043F19+           AGGAGGAGGAGGAGAGAGAAAGAGGTTGACGTGAGATGGAAGATGAAGATCATAAATCGG
                      ____________________________________________________________
consensus             AGGAGGAGGAGGAGAGAGAAAGAGGTTGACGTGAGATGGAAGATGAAGATCATAAATCGG
 
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JMSF043F19+           AGCCGTATTTCACATATTCGGATCCATCGCAGGTTGCTTTAATCTAGACAGTAGCCCGCA
                      ____________________________________________________________
consensus             AGCCGTATTTCACATATTCGGATCCATCGCAGGTTGCTTTAATCTAGACAGTAGCCCGCA
 
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JMSF043F19+           GCTGCGCTAGCTAGCTGTAGTAGTACTATACAAGTATGCTATGCTATATAGTTGTTCTTC
                      ____________________________________________________________
consensus             GCTGCGCTAGCTAGCTGTAGTAGTACTATACAAGTATGCTATGCTATATAGTTGTTCTTC