Contig 000932:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043E23+            TTTGCACTTAAGTATAACAGTATTACCATTGTGTTTCTGTGCTAACACAGATCAACATT
                      ____________________________________________________________
consensus              TTTGCACTTAAGTATAACAGTATTACCATTGTGTTTCTGTGCTAACACAGATCAACATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043E23+           TTCTTTTTTCTCTTCCTTCTTATTTTTCGAACAGAAAAAAGAAATCAGTGTAAAGTATAA
                      ____________________________________________________________
consensus             TTCTTTTTTCTCTTCCTTCTTATTTTTCGAACAGAAAAAAGAAATCAGTGTAAAGTATAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043E23+           GAAGATGCAGGCCATTTTAAAGATGATCGAATAAAAAGATAGTTAAGCAGACCATACCAC
                      ____________________________________________________________
consensus             GAAGATGCAGGCCATTTTAAAGATGATCGAATAAAAAGATAGTTAAGCAGACCATACCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043E23+           GTGCAATAAACTCTGAAGAAGATACCGCATGCATATACAGTTCCGGTATATCGAGCTGTT
                      ____________________________________________________________
consensus             GTGCAATAAACTCTGAAGAAGATACCGCATGCATATACAGTTCCGGTATATCGAGCTGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043E23+           TGGATTAGCAAAATCATCGCAATCATCTCGCAAGCAACAACAGGTAGCACCCATTATACC
                      ____________________________________________________________
consensus             TGGATTAGCAAAATCATCGCAATCATCTCGCAAGCAACAACAGGTAGCACCCATTATACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043E23+           CTCCAAAATCAGAGTCTATCCTTCAAATCGCCTCTTTTTCTAGTATCATTTACAGCCCCA
                      ____________________________________________________________
consensus             CTCCAAAATCAGAGTCTATCCTTCAAATCGCCTCTTTTTCTAGTATCATTTACAGCCCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043E23+           AAAGCCACAAGTTCAAAGCAAAACGCTTGTGAAACAGAACTCGGGGATGACCGAAAACTG
                      ____________________________________________________________
consensus             AAAGCCACAAGTTCAAAGCAAAACGCTTGTGAAACAGAACTCGGGGATGACCGAAAACTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043E23+           ATAGAGAACCCTAGGCTCACAGAAACTGTGGGGGGAGTGCAAACCAGCAATTAGTCTCTC
                      ____________________________________________________________
consensus             ATAGAGAACCCTAGGCTCACAGAAACTGTGGGGGGAGTGCAAACCAGCAATTAGTCTCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF009A17+              AGAACAACCCTGAATGGCCTTTTCTTATCTAGATCACAGCCAGTATCACCTCTACTT
JMSF043E23+           TTGAGAACAACCCTGAATGGCCTTTTCTTATCTAGATCACAGCCAGTATCACCTCTACTT
                      ____________________________________________________________
consensus             TTGAGAACAACCCTGAATGGCCTTTTCTTATCTAGATCACAGCCAGTATCACCTCTACTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF009A17+           GGGAGGAGAGTGGACTCAAAGTCTGTTGTTTGAGGAAAAAACATAGAAAAATGAATCAAT
JMSF043E23+           GGGAGGAGAGTGGACTCAAAGTCTGTTGTTTGAGGAAAAAACATAGAAAAATGAATCAAT
                      ____________________________________________________________
consensus             GGGAGGAGAGTGGACTCAAAGTCTGTTGTTTGAGGAAAAAACATAGAAAAATGAATCAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF009A17+           AGAGGATAGATGCCTCTAGTCTTGGATTGTTTCCCATAGTTTACAATGTAGATTTTGGGT
JMSF043E23+           AGAGGATAGATGCCTCTAGTCTTGGATTGTTTCCCATAGTTTACAATGTAGATTTTGGGT
                      ____________________________________________________________
consensus             AGAGGATAGATGCCTCTAGTCTTGGATTGTTTCCCATAGTTTACAATGTAGATTTTGGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF009A17+           TTTCCGCCGAGAAATCCTATCAAGATTGCGGGAATAAAGCTGTCTCCTCTTTCCCTTCC 
JMSF043E23+           TTTCCGCCGAGAAATCCTATCAAGATTGCGGGAATAAAGCTGTCTCCTCTTTCCCTTCCC
                      ____________________________________________________________
consensus             TTTCCGCCGAGAAATCCTATCAAGATTGCGGGAATAAAGCTGTCTCCTCTTTCCCTTCCC