Contig 000931:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018H05Sequence575000931 (3)ref|XP_011072753.1|3e-27PREDICTED: kelch repeat-containing protein At3g27220 [Sesamum indicum] ref|XP_0748007714 (5)ref|XP_009592717.1|7e-112PREDICTED: kelch repeat-containing protein At3g27220-like isoform X2 [Nicotiana
JMSF002I02Sequence326000931 (3)ref|XP_010519268.1|9e-23PREDICTED: kelch repeat-containing protein At3g27220 [Tarenaya hassleriana]740014942ref|XP_009592717.1|4e-100PREDICTED: kelch repeat-containing protein At3g27220-like isoform X2 [Nicotiana
JMSF043E01Sequence714000931 (3)gb|KJB69017.1|2e-60hypothetical protein B456_011G003000 [Gossypium raimondii]762007714 (5)ref|XP_009592717.1|1e-100PREDICTED: kelch repeat-containing protein At3g27220-like isoform X2 [Nicotiana

Alignment

This contig is upended


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JMSF043E01+                 GGACCATATTGTCCAGTGACAACATAAATATATCTCCCATCTGTTACCATACCC
                      ____________________________________________________________
consensus                   GGACCATATTGTCCAGTGACAACATAAATATATCTCCCATCTGTTACCATACCC
 
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JMSF043E01+           AAATGTGAATGGGCCATTTCTTTGGGCATATCAAACCTCCCTCCCCACGTGTTATCTGTG
                      ____________________________________________________________
consensus             AAATGTGAATGGGCCATTTCTTTGGGCATATCAAACCTCCCTCCCCACGTGTTATCTGTG
 
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JMSF002I02+                                                  GTTCCATATCCAGCAAAGACA
JMFF018H05+                                  ATGAACAGAATCAATGGTTCCATATCCAGCAAAGACA
JMSF043E01+           AAGTTGTATATATCAACATGAGAATGAACAGAATCAATGGTTCCATATCCAGCAAAGACA
                      ____________________________________________________________
consensus             AAGTTGTATATATCAACATGAGAATGAACAGAATCAATGGTTCCATATCCAGCAAAGACA
 
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JMSF002I02+           TAAAGAAGGTTCTTGATTTGTATTGCAGCACCATCAAGACGAGGCACTGGGGCTGGGGGC
JMFF018H05+           AAAAGAAGGTTCTTGACTTGTATGGCTGCACCATCAAGACGAGGCACGGGTGCAAAAGCC
JMSF043E01+           AAAAGAAGGTTCTTGATTTGTATGGCTGCACCATCAAGACGAGGCACGGGTGCAAAAGCC
                      ____________________________________________________________
consensus             AAAAGAAGGTTCTTGATTTGTATGGCTGCACCATCAAGACGAGGCACGGGTGCAAAAGCC
 
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JMSF002I02+           ATCTTCTCCCATTTTAACTCCGGAGCAGGCAAATCAGCAAAGGTAGNTGATAATTTCCTC
JMFF018H05+           ATCTTCTCCCACTTTAACTCGGGAGCTGGCAAATCTGCAAAGGTAGCAGACAATTTCCTC
JMSF043E01+           ATCTTCTCCCACTTTAACTCGGGAGCTGGCAAATCTGCAAAGGTAGCAGACAATTTCCTC
                      ____________________________________________________________
consensus             ATCTTCTCCCACTTTAACTCGGGAGCTGGCAAATCTGCAAAGGTAGCAGACAATTTCCTC
 
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JMSF002I02+           TC                                                          
JMFF018H05+           TCTTTAGTGCCATC-TTTTTTACCCTCCTTGGCTGAATCCTTAGGGTTAGGGAGGTTGTT
JMSF043E01+           TCTTTAGTGCCATCTTTTTTTACCCTCCTTGGCTGAATCCTTAGGGTTAGGGAGGTTGTT
                      ____________________________________________________________
consensus             TCTTTAGTGCCATCTTTTTTTACCCTCCTTGGCTGAATCCTTAGGGTTAGGGAGGTTGTT
 
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JMFF018H05+           GGTCTGATTTGGGAAGATGACATTACTGGATTCCGGAACAGCCCAATCACGGAAGGCGGC
JMSF043E01+           GGTCTGATTTGGGAAGATGACATTACTGGATTCCGGAACAGCCCAATCACGGAAGGCGGC
                      ____________________________________________________________
consensus             GGTCTGATTTGGGAAGATGACATTACTGGATTCCGGAACAGCCCAATCACGGAAGGCGGC
 
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JMFF018H05+           GGAGGAAGGGGAAGAAGCAGAGGAAGCCCACAGCAGATCTACCACGAGAGCCGCCCCCAA
JMSF043E01+           GGAGGAAGGGGAAGAAGTAGAGGAAGCCCACAGCAGATCTACCACGAGAGCCGCCCCCAA
                      ____________________________________________________________
consensus             GGAGGAAGGGGAAGAAGTAGAGGAAGCCCACAGCAGATCTACCACGAGAGCCGCCCCCAA
 
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JMFF018H05+           CAGCCCTACGCACACAAACACCAACTTAGTTGTTCTGGGTTTTCCGGCAGCTGCTCCGCC
JMSF043E01+           CAGCCCTACGCACACAAACACCAACTTAGTTGTTCTGGGTTTTCCGGCAGCTGCTCCGCC
                      ____________________________________________________________
consensus             CAGCCCTACGCACACAAACACCAACTTAGTTGTTCTGGGTTTTCCGGCAGCTGCTCCGCC
 
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JMFF018H05+           TGCTCTGCCGCCCAATCTCATCTCATCAGCTGCTCGCCCTCGCCTCTACTGATTATTTAC
JMSF043E01+           TGCTCTGCCGCCCAATCTCATCTCATCAGCTGCTCGCCCTCGCCTCTACTGATTATTTAC
                      ____________________________________________________________
consensus             TGCTCTGCCGCCCAATCTCATCTCATCAGCTGCTCGCCCTCGCCTCTACTGATTATTTAC
 
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JMFF018H05+           CCAGCTACGATAATCTTAGATGTAAATGTGAGTATTGAACATAAATTCCTCCAAAAGTTT
JMSF043E01+           CCAGCTACGATAATCTTAGATGTAAATGTGAGTATTGAACATAAATTCCTCCAAAAGTTT
                      ____________________________________________________________
consensus             CCAGCTACGATAATCTTAGATGTAAATGTGAGTATTGAACATAAATTCCTCCAAAAGTTT
 
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JMFF018H05+           CTGCTTCTTGTCTTTCCTTCAAAATTCTTTGAGCGCGTATGAAATCACAACTGCATAAC 
JMSF043E01+           CTGCTTCTTGTCTTTCCTTCAAAATTCTTTGAGCGCGTATGAAATCACAACTGCATAACC
                      ____________________________________________________________
consensus             CTGCTTCTTGTCTTTCCTTCAAAATTCTTTGAGCGCGTATGAAATCACAACTGCATAACC