Contig 000928:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035F16Sequence495000928 (3)ref|XP_009624799.1|2e-18PREDICTED: outer envelope protein 64, mitochondrial [Nicotiana tomentosiformis]229012730 (3)
JMSF042O10Sequence747000928 (3)ref|XP_009624799.1|6e-50PREDICTED: outer envelope protein 64, mitochondrial [Nicotiana tomentosiformis]561012730 (3)ref|XP_009624799.1|4e-07PREDICTED: outer envelope protein 64, mitochondrial [Nicotiana tomentosiformis]
JMSF049B23Sequence687000928 (3)ref|XP_009776046.1|5e-37PREDICTED: outer envelope protein 64, mitochondrial [Nicotiana sylvestris]701012730 (3)ref|XP_009624799.1|1e-80PREDICTED: outer envelope protein 64, mitochondrial [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF042O10+ TGGTATCAGTAGCAAGAGCAAAGTCAAC
                      ____________________________________________________________
consensus TGGTATCAGTAGCAAGAGCAAAGTCAAC
 
. : . : . : . : . : . :
JMSF049B23+ CTAGATGAGCCTCCAGGAACATGAAATGG
JMSF042O10+ AAGATTGGATGCAACAGCAACCGCTGAACCACTAGATGAGCCTCCAGGAACATGAAATGG
                      ____________________________________________________________
consensus AAGATTGGATGCAACAGCAACCGCTGAACCACTAGATGAGCCTCCAGGAACATGAAATGG
 
. : . : . : . : . : . :
JMSF049B23+ CAATTTGGGGTTAGTTGGTGTTCCATAGTGCACATTTCTTCCAGTGATCCCCAAACCAAG
JMSF042O10+ CAATTTGGGGTTAGTTGGTGTTCCATAGTGCACATTTCTTCCAGTGATCCCCAAACCAAG
                      ____________________________________________________________
consensus CAATTTGGGGTTAGTTGGTGTTCCATAGTGCACATTTCTTCCAGTGATCCCCAAACCAAG
 
. : . : . : . : . : . :
JMSF049B23+ TTCATCCATAATCGTCTTGCCAATGCAAGTAGCTCCACTCTTCAGTAGAGCGTAGACTAC
JMSF042O10+ TTCATCCATAATCGTCTTGCCAATGCAAGTAGCTCCACTCTTCAGTAGAGCGTAGACTAC
                      ____________________________________________________________
consensus TTCATCCATAATCGTCTTGCCAATGCAAGTAGCTCCACTCTTCAGTAGAGCGTAGACTAC
 
. : . : . : . : . : . :
JMSF049B23+ CGCCGCCGTCTCTGCAGCCGCTTCATGTGTCCGTTTCCACTCTGGGCTCCCAAGCCCCGT
JMFF035F16+ CTGGGCTCCCAAGCCCCGT
JMSF042O10+ CGCCGCCGTCTCTGCAGCCGCTTCATGTGTCCGTTTCCACTCTGGGCTCCCAAGCCCCGT
                      ____________________________________________________________
consensus CGCCGCCGTCTCTGCAGCCGCTTCATGTGTCCGTTTCCACTCTGGGCTCCCAAGCCCCGT
 
. : . : . : . : . : . :
JMSF049B23+ TACGTACCCCTTCACATCAATATTGTCTTTGATGGCAAACGTGAGGCCGGCGAGGAGGAG
JMFF035F16+ TACGTACCCCTTCACATCAATATTGTCTTTGATGGCAAACGTGAGGCCGGCGAGGAGGAG
JMSF042O10+ TACGTACCCCTTCACATCAATATTGTCTTTGATGGCAAACGTGAGGCCGGCGAGGAGGAG
                      ____________________________________________________________
consensus TACGTACCCCTTCACATCAATATTGTCTTTGATGGCAAACGTGAGGCCGGCGAGGAGGAG
 
. : . : . : . : . : . :
JMSF049B23+ CGGAGCAGCGGGAGGAGGGGGTTGAGGAAAAAGGAAGCAACTCGAAACGCTCGATGAAGG
JMFF035F16+ CGGAGCAGCGGGAGGAGGGGGTTGAGG-AAAAGGAAGCAACTCGAAACGCTCGATGAAGG
JMSF042O10+ CGGAGCAGCGGGAGGAGGGGGTTGAGG-AAAAGGAAGCAACTCGAAACGCTCGATGAAGG
                      ____________________________________________________________
consensus CGGAGCAGCGGGAGGAGGGGGTTGAGG-AAAAGGAAGCAACTCGAAACGCTCGATGAAGG
 
. : . : . : . : . : . :
JMSF049B23+ CCCCAAAATCTTCCTTAATCGCGTCACTGGCACTCAGCCGGCGGCGGCGGTGGACCTCGG
JMFF035F16+ CCCCAAAATCTTCCTTAATCGCGTCACTGGCACTCAGCCGGCGGCGGCGGTGGACCTCGG
JMSF042O10+ CCCCAAAATCTTCCTTAATCGCGTCACTGGCACTCAGCCGGCGGCGGCGGTGGACCTCGG
                      ____________________________________________________________
consensus CCCCAAAATCTTCCTTAATCGCGTCACTGGCACTCAGCCGGCGGCGGCGGTGGACCTCGG
 
. : . : . : . : . : . :
JMSF049B23+ CTAGAATCACGATCCCGGCGACTCCAACGCCTATCACCACCCAAAGCTTGGGATTCGAGG
JMFF035F16+ CTAGAATCACGATCCCGGCGACTCCAACGCCTATCACCACCCAAAGCTTGGGATTCGAGG
JMSF042O10+ CTAGAATCACGATCCCGGCGACTCCAACGCCTATCACCACCCAAAGCTTGGGATTCGAGG
                      ____________________________________________________________
consensus CTAGAATCACGATCCCGGCGACTCCAACGCCTATCACCACCCAAAGCTTGGGATTCGAGG
 
. : . : . : . : . : . :
JMSF049B23+ CGCTGAGCTTCGACAGCTTTGTCATGGCCGGAAATGTCCGCCGGTTGGTGGGCTAAATTT
JMFF035F16+ CGCTGAGCTTCGACAGCTTTGTCATGGCCGGAAATGTCCGCCGGTTGGTGGGCTAAATTT
JMSF042O10+ CGCTGAGCTTCGACAGCTTTGTCATGGCCGGAAATGTCCGCCGGTTGGTGGGCTAAATTT
                      ____________________________________________________________
consensus CGCTGAGCTTCGACAGCTTTGTCATGGCCGGAAATGTCCGCCGGTTGGTGGGCTAAATTT
 
. : . : . : . : . : . :
JMSF049B23+ AGGGTTTTTGAAGGGTTTAAGAGAGTTTTCTAAAACTCAGAAAGGGGATTGCAATTTGCA
JMFF035F16+ AGGGTTTTTGAAGGGTTTAAGAGAGTTTTCTAAAACTCAGAAAGGGGATTGCAATTTGCA
JMSF042O10+ AGGGTTTTTGAAGGGTTTAAGAGAGTTTTCTAAAACTCAGAAAGGGGATTGCAATTTGCA
                      ____________________________________________________________
consensus AGGGTTTTTGAAGGGTTTAAGAGAGTTTTCTAAAACTCAGAAAGGGGATTGCAATTTGCA
 
. : . : . : . : . : . :
JMSF049B23+ ACCTCGCAACAGTGTAAACCATCAAAGGATGCGCGCGCGTTGTCTAGACTCGATAAACTT
JMFF035F16+ ACCTCGCAACAGTGTAAACCATCAAAGGATGCGCGCGCGTTGTCTAGACTCGATAAACTT
JMSF042O10+ ACCTCGCAACAGTGTAAACCATCAAAGGATGCGCGCGCGTTGTCTAGACTCGATAAACTT
                      ____________________________________________________________
consensus ACCTCGCAACAGTGTAAACCATCAAAGGATGCGCGCGCGTTGTCTAGACTCGATAAACTT
 
. : . : . : . : . : . :
JMSF049B23+ CCTCCTTTCTCCCCACACCGAATCACAATGAAAAGTTGGCAAAAACCAAAAGATCAT
JMFF035F16+ CCTCCTTTCTCCCCACACCGAATCACAATGAAAAGTTGGCAAAAACCAAAAGATCAT
JMSF042O10+ CCTCCTTTCTCCCCACACCGAATCACAATGAAAAGTTGGCAAAAACCAAAAGATCATACC
                      ____________________________________________________________
consensus CCTCCTTTCTCCCCACACCGAATCACAATGAAAAGTTGGCAAAAACCAAAAGATCATACC