Contig 000927:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF046C15+                                           ACCAAATGCTGATAGTCACTGGCATTTA
JMSF042N11+                                     TTAGGAACCAAATGCTGATAGTCACTGGCATTTA
                      ____________________________________________________________
consensus                                       TTAGGAACCAAATGCTGATAGTCACTGGCATTTA
 
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JMSF046C15+           ACAGAGCTCTGCAGTTTATTCCAGGGCAAATGACTTCAACCATGTTTGCTTCAACCCTTG
JMSF042N11+           ACAGAGCTNTGCAGTTTATTCCAGGGCAAATGACTTCAACCATGTTTGCTTCAACCCTTG
                      ____________________________________________________________
consensus             ACAGAGCTCTGCAGTTTATTCCAGGGCAAATGACTTCAACCATGTTTGCTTCAACCCTTG
 
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JMSF046C15+           CGATGATATGCTTGCTCATGCACTCAGAACAGAATGAGTGAGAACATTCGTCATGTTCTA
JMSF042N11+           CGATGATATGCTTGCTCATGCACTCAGAACAGAATGAGTGAGAACATTCGTCATGTTCTA
                      ____________________________________________________________
consensus             CGATGATATGCTTGCTCATGCACTCAGAACAGAATGAGTGAGAACATTCGTCATGTTCTA
 
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JMSF046C15+           TCATCTGCCATTTTCCTTTGTCCTCTAAACAAATCTCGCAGAAGCTTTTAGGAAAGGGTC
JMSF042N11+           TCATCTGCCATTTTCCTTTGTCCTCTAAACAAATCTCGCAGAAGCTTTTAGGAAAGGGTC
                      ____________________________________________________________
consensus             TCATCTGCCATTTTCCTTTGTCCTCTAAACAAATCTCGCAGAAGCTTTTAGGAAAGGGTC
 
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JMSF046C15+           CTCCCTGGACAGATGAAGATGCCTCATTAACAGTCGGAGCAGTAGAAAGCAAATCCAATA
JMSF042N11+           CTCCCTGGACAGATGAAGATGCCTCATTAACAGTCGGAGCAGTAGAAAGCAAATCCAATA
                      ____________________________________________________________
consensus             CTCCCTGGACAGATGAAGATGCCTCATTAACAGTCGGAGCAGTAGAAAGCAAATCCAATA
 
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JMSF046C15+           CAGATGAAGATGCATCATTAACAGTCGAAGCAGTAGAAAGCAAAGCCAATACAGATGAAG
JMSF042N11+           CAGATGAAGATGCATCATTAACAGTCGAAGCAGTAGAAAGCAAAGCCAATACAGATGAAG
                      ____________________________________________________________
consensus             CAGATGAAGATGCATCATTAACAGTCGAAGCAGTAGAAAGCAAAGCCAATACAGATGAAG
 
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JMSF046C15+           ATGCATCATTAATAGTTGGAGCAGTAAAAAGCGAAGCCAATAAAGTTTCTTCAAACTGCA
JMSF042N11+           ATGCATCATTAATAGTTGGAGCAGTAAAAAGCGAAGCCAATAAAGTTTCTTCAAACTGCA
                      ____________________________________________________________
consensus             ATGCATCATTAATAGTTGGAGCAGTAAAAAGCGAAGCCAATAAAGTTTCTTCAAACTGCA
 
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JMSF046C15+           GATCTTCAGCAAGTGCAGCATCTAGATCCGGAACATGAACCTTCCTGGTTTTTTCTACTT
JMSF042N11+           GATCTTCAGCAAGTGCAGCATCTAGATCCGGAACATGAACCTTCCTGGTTTTTTCTACTT
                      ____________________________________________________________
consensus             GATCTTCAGCAAGTGCAGCATCTAGATCCGGAACATGAACCTTCCTGGTTTTTTCTACTT
 
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JMSF046C15+           CAGTGGAGAAATCGCGGCGAACTCCAAGGCACTTGCTCTTCATCTTCTGCTTAGTCGTCT
JMSF042N11+           CAGTGGAGAAATCGCGGCGAACTCCAAGGCACTTGCTCTTCATCTTCTGCTTAGTCGTCT
                      ____________________________________________________________
consensus             CAGTGGAGAAATCGCGGCGAACTCCAAGGCACTTGCTCTTCATCTTCTGCTTAGTCGTCT
 
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JMSF046C15+           GCTTCAAGTCACGCACCATCTCGAGCAAGAGGTGAACGGAGATGATGACCGCTGATACAC
JMSF042N11+           GCTTCAAGTCACGCACCATCTCGAGCAAGAGGTGAACGGAGATGATGACCGCTGATACAC
                      ____________________________________________________________
consensus             GCTTCAAGTCACGCACCATCTCGAGCAAGAGGTGAACGGAGATGATGACCGCTGATACAC
 
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JMSF046C15+           CTACGAAGGAAATGATGAGGTCATGGAAATCCAGGGGGGCGATGTAGGCAGTCCACAATT
JMSF042N11+           CTACGAAGGAAATGATGAGGTCATGGAAATCCAGGGGGGCGATGTAGGCAGTCCACAATT
                      ____________________________________________________________
consensus             CTACGAAGGAAATGATGAGGTCATGGAAATCCAGGGGGGCGATGTAGGCAGTCCACAATT
 
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JMSF046C15+           CATTGAAGAGAGCTTGAGCAGTCGGCGAAATTGAATTGGAGATATTGGCTAAAAACGATC
JMSF042N11+           CATTGAAGAGAGCTTGAGCAGTCGGCGAAATTGAATTGGAGATATTGGCTAAAAACGATC
                      ____________________________________________________________
consensus             CATTGAAGAGAGCTTGAGCAGTCGGCGAAATTGAATTGGAGATATTGGCTAAAAACGATC
 
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JMSF046C15+           CCATGAACGTACGAATGTACGATCCGGAAGAAGAAACAAGGCGACCCGAAGAAAGGGGAA
JMSF042N11+           CCATGAACGTACGAATGTACGATCCGGAAGAAGAAACAAGGCGACCCGAAGAAAGGGGAA
                      ____________________________________________________________
consensus             CCATGAACGTACGAATGTACGATCCGGAAGAAGAAACAAGGCGACCCGAAGAAAGGGGAA
 
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JMSF046C15+           ATTGTTTT                                                    
JMSF042N11+           ATTGTTTTAACTGAATTTCATAGTATGATGAAGTTGGAAATTGGAATCCTCGGCACCGCC
                      ____________________________________________________________
consensus             ATTGTTTTAACTGAATTTCATAGTATGATGAAGTTGGAAATTGGAATCCTCGGCACCGCC