Contig 000926:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF035B12-                                          TATAACATGGACAAGGTTAGTTGTAGAC
                      ____________________________________________________________
consensus                                             TATAACATGGACAAGGTTAGTTGTAGAC
 
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rJMSF035B12-          TGTGACTATTGGAATTATTACAATGAAAATTAAAGAGGCGTGTAGCTTCATCCTTGATGA
                      ____________________________________________________________
consensus             TGTGACTATTGGAATTATTACAATGAAAATTAAAGAGGCGTGTAGCTTCATCCTTGATGA
 
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rJMSF035B12-          TTGTTTGAATTTCAGGCCACATGTGATGTGGGAGTCATCTCTGTCGTTTGTGGGGTTTGG
                      ____________________________________________________________
consensus             TTGTTTGAATTTCAGGCCACATGTGATGTGGGAGTCATCTCTGTCGTTTGTGGGGTTTGG
 
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rJMSF035B12-          TTCTTCTCCTTCTCCTCCATGTCTTTATTGCGTTTCATCTCTCCGTAAAAATAAGAAACA
                      ____________________________________________________________
consensus             TTCTTCTCCTTCTCCTCCATGTCTTTATTGCGTTTCATCTCTCCGTAAAAATAAGAAACA
 
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rJMSF035B12-          AATCCCCAGAGGCACAGGAAAAGAGAGACGCCCTTCTCCGGCTGGAACTTCTCGTGGAAT
                      ____________________________________________________________
consensus             AATCCCCAGAGGCACAGGAAAAGAGAGACGCCCTTCTCCGGCTGGAACTTCTCGTGGAAT
 
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rJMSF035B12-          AAAATCACGGCGAGAAGCTCCGTCACTGGGAGGAGAACGGTGTTGATGACGACGGAGAGC
                      ____________________________________________________________
consensus             AAAATCACGGCGAGAAGCTCCGTCACTGGGAGGAGAACGGTGTTGATGACGACGGAGAGC
 
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rJMSF035B12-          AAAGATGAACCGTAGCAGATCACCCCAAGGGCTCCTATCAGGAAAAATTGGAATATAATC
                      ____________________________________________________________
consensus             AAAGATGAACCGTAGCAGATCACCCCAAGGGCTCCTATCAGGAAAAATTGGAATATAATC
 
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rJMSF035B12-          CCACTGCATATCACTAATATGTAATATTTTGCTGCACCCAATTCAAATTCTCTTGCTTCC
JMSF035B12+                                                             TCTTGCTTCC
JMSF042N02+                                                             TCTTGCTTCC
                      ____________________________________________________________
consensus             CCACTGCATATCACTAATATGTAATATTTTGCTGCACCCAATTCAAATTCTCTTGCTTCC
 
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rJMSF035B12-          CTTGGGATCACCTGGAAGTCATGGTTTATGAACATTCCAACCGAGCAGAAAAGAGTGGCA
JMSF035B12+           CTTGGGATCACCTGGAAGTCATGGTTTATGAACATTCCAACCGAGCAGAAAAGAGTGGCA
JMSF042N02+           CTTGGGATCACCTGGAAGTCATGGTTTATGAACATTCCAACCGAGCAGAAAAGAGTGGCA
                      ____________________________________________________________
consensus             CTTGGGATCACCTGGAAGTCATGGTTTATGAACATTCCAACCGAGCAGAAAAGAGTGGCA
 
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rJMSF035B12-          GCAAGAGACACAACCATCTGAAATTCCAACACCAAAATATAACCAATGGGTGTATTAGCC
JMSF035B12+           GCAAGAGACACAACCATCTGAAATTCCAACACCAAAATATAACCAATGGGTGTATTAGCC
JMSF042N02+           GCAAGAGACACAACCATCTGAAATTCCAACACCAAAATATAACCAATGGGTGTATTAGCC
                      ____________________________________________________________
consensus             GCAAGAGACACAACCATCTGAAATTCCAACACCAAAATATAACCAATGGGTGTATTAGCC
 
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rJMSF035B12-          TTGTTGTAAATCAACTCCACCAACGGCATAATCAACCCATACAAAGCCGCCGACCCAAGA
JMSF035B12+           TTGTTGTAAATCAACTCCACCAACGGCATAATCAACCCATACAAAGCCGCCGACCCAAGA
JMSF042N02+           TTGTTGTAAATCAACTCCACCAACGGCATAATCAACCCATACAAAGCCGCCGACCCAAGA
                      ____________________________________________________________
consensus             TTGTTGTAAATCAACTCCACCAACGGCATAATCAACCCATACAAAGCCGCCGACCCAAGA
 
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rJMSF035B12-          GTCAACACAAACCCCAAACCGTACTCCTTGTTCGACTCCCCGGCAGGCCGGTCGTTTCCG
JMSF035B12+           GTCAACACAAACCCCAAACCGTACTCCTTGTTCGACTCCCCGGCAGGCCGGTCGTTTCCG
JMSF042N02+           GTCAACACAAACCCCAAACCGTACTCCTTGTTCGACTCCCCGGCAGGCCGGTCGTTTCCG
                      ____________________________________________________________
consensus             GTCAACACAAACCCCAAACCGTACTCCTTGTTCGACTCCCCGGCAGGCCGGTCGTTTCCG
 
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rJMSF035B12-          GCTCGGAGACCCAAAACCACCGCCCCGGCGGTCAGCAACACGATGGAG            
JMSF035B12+           GCTCGGAGACCCAAAACCACCGCCCCGGCGGTCAGCAACACGATGGAGTTCACCGAGAAG
JMSF042N02+           GCTCGGAGACCCAAAACCACCGCCCCGGCGGTCAGCAACACGATGGAGTTCACCGAGAAG
                      ____________________________________________________________
consensus             GCTCGGAGACCCAAAACCACCGCCCCGGCGGTCAGCAACACGATGGAGTTCACCGAGAAG
 
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JMSF035B12+           GCGGTGAAGTGTTGCTTCACGAGGAAGAAAGCGAACAACGCCGTGAATGCCAGCTGGGAG
JMSF042N02+           GCGGTGAAGTGTTGCTTCACGAGGAAGAAAGCGAACAACGCCGTGAATGCCAGCTGGGAG
                      ____________________________________________________________
consensus             GCGGTGAAGTGTTGCTTCACGAGGAAGAAAGCGAACAACGCCGTGAATGCCAGCTGGGAG
 
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JMSF035B12+           CTGACGATGAGGGACGACGTGGAAACGGGAAGCTTGGCGACGCCGTAGGTGTAGAGATAG
JMSF042N02+           CTGACGATGAGGGACGACGTGGAAACGGGAAGCTTGGCGACGCCGTAGGTGTAGAGATAG
                      ____________________________________________________________
consensus             CTGACGATGAGGGACGACGTGGAAACGGGAAGCTTGGCGACGCCGTAGGTGTAGAGATAG
 
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JMSF035B12+           TTCATGAGGCCCACGAGAAGGCCGATGAGTGCGCCGGAGATGAAAAGACACGGCGTCATA
JMSF042N02+           TTCATGAGGCCCACGAGAAGGCCGATGAGTGCGCCGGAGATGAAAAGACACGGCGTCATA
                      ____________________________________________________________
consensus             TTCATGAGGCCCACGAGAAGGCCGATGAGTGCGCCGGAGATGAAAAGACACGGCGTCATA
 
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JMSF035B12+           AGGAAGAACTTGGTGTTGGAGTCGACGTCACTCCTACGGCGGCGCCGGCGGAGGTAGGAG
JMSF042N02+           AGGAAGAACTTGGTGTTGGAGTCGACGTCACTCCTACGGCGGCGCCGGCGGAGGTAGGAG
                      ____________________________________________________________
consensus             AGGAAGAACTTGGTGTTGGAGTCGACGTCACTCCTACGGCGGCGCCGGCGGAGGTAGGAG
 
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JMSF035B12+           ATGAGGAGTGGGATGAAAACGACCGGCCAGGCGGCGGTTTGCAGCCACGTGGAAAACCAT
JMSF042N02+           ATGAGGAGTGGGATGAAAACGACCGGCCAGGCGGCGGTTTGCAGCCACGTGGAAAACCAT
                      ____________________________________________________________
consensus             ATGAGGAGTGGGATGAAAACGACCGGCCAGGCGGCGGTTTGCAGCCACGTGGAAAACCAT
 
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JMSF035B12+           AAACGGGCGCCGCCTCGGAGGAAGTAGAGGCGGAGGAGCAAAGGGCCACCGC        
JMSF042N02+           AAACGGGCGCCGCCTCGGAGGAAGTAGAGGCGGAGGAGCAAAGGGCCACCGCAGTTCCCG
                      ____________________________________________________________
consensus             AAACGGGCGCCGCCTCGGAGGAAGTAGAGGCGGAGGAGCAAAGGGCCACCGCAGTTCCCG
 
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JMSF042N02+           ATTGCCAATAATATAGTGTTGAATAAAAGGAAGATTGTCCTCATCTTGTTGCATCATGTC
                      ____________________________________________________________
consensus             ATTGCCAATAATATAGTGTTGAATAAAAGGAAGATTGTCCTCATCTTGTTGCATCATGTC