Contig 000920:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS033A12Sequence643000920 (5)ref|XP_009592595.1|1e-80PREDICTED: DNA polymerase delta catalytic subunit [Nicotiana tomentosiformis]
JMFS111G08Sequence627000920 (5)ref|XP_009762577.1|5e-125PREDICTED: DNA polymerase delta catalytic subunit [Nicotiana sylvestris]
JMSF041O11Sequence748000920 (5)ref|XP_009592595.1|1e-99PREDICTED: DNA polymerase delta catalytic subunit [Nicotiana tomentosiformis]708002968 (3)ref|XP_007212871.1|1e-83hypothetical protein PRUPE_ppa021601mg, partial [Prunus persica] gb|EMJ14070.1|
JMSF042E14Sequence830000920 (5)ref|XP_009592595.1|6e-98PREDICTED: DNA polymerase delta catalytic subunit [Nicotiana tomentosiformis]800002968 (3)ref|XP_007212871.1|5e-115hypothetical protein PRUPE_ppa021601mg, partial [Prunus persica] gb|EMJ14070.1|
JMSF044A24Sequence690000920 (5)ref|XP_009592595.1|9e-87PREDICTED: DNA polymerase delta catalytic subunit [Nicotiana tomentosiformis]303002968 (3)

Alignment

This contig is upended


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JMFS111G08+                                   ATAGGAAACTCTACCATCCCTAAGGCCTCAGCTCTC
                      ____________________________________________________________
consensus                                     ATAGGAAACTCTACCATCCCTAAGGCCTCAGCTCTC
 
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JMFS111G08+           CGAATGAGATATGGCAAATCAAAGTTGCAGATGTTATACCCAATTAATATATCAGGGTCA
                      ____________________________________________________________
consensus             CGAATGAGATATGGCAAATCAAAGTTGCAGATGTTATACCCAATTAATATATCAGGGTCA
 
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JMFS111G08+           ACTTCCCGTACAAAGTCCCTCCAAGCTAGTAAAACCTCTCGTTCAGTTTCAAAGGACATG
                      ____________________________________________________________
consensus             ACTTCCCGTACAAAGTCCCTCCAAGCTAGTAAAACCTCTCGTTCAGTTTCAAAGGACATG
 
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JMFS111G08+           ACATCAACCCCAACTATTGGTGAGCAAGACTTAAGGGTCATAACATTACGCACAAACGGC
                      ____________________________________________________________
consensus             ACATCAACCCCAACTATTGGTGAGCAAGACTTAAGGGTCATAACATTACGCACAAACGGC
 
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JMFS111G08+           TGATCCTGTCCCTGCAAGGTAACTAGGTTCGCTACCTGGATAACAGGATCATGGGTAGGT
                      ____________________________________________________________
consensus             TGATCCTGTCCCTGCAAGGTAACTAGGTTCGCTACCTGGATAACAGGATCATGGGTAGGT
 
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JMFS111G08+           TCAGGAAAGTGGCCTTTACGCCCAGCACATTCAATGTCAAAACTTAATATACGAAAAGGA
                      ____________________________________________________________
consensus             TCAGGAAAGTGGCCTTTACGCCCAGCACATTCAATGTCAAAACTTAATATACGAAAAGGA
 
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JMFS111G08+           GCCATCTTTGAGAATTCTCCTTCAGGCTTATGGCTTATCAAGTCAGAATAGAGGCAATCA
                      ____________________________________________________________
consensus             GCCATCTTTGAGAATTCTCCTTCAGGCTTATGGCTTATCAAGTCAGAATAGAGGCAATCA
 
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JMFS111G08+           AACTCCAGTTGGGAATAAGAGATATTCTTTGATGATTTCTTGTATTTTCCAGCTGGAACT
                      ____________________________________________________________
consensus             AACTCCAGTTGGGAATAAGAGATATTCTTTGATGATTTCTTGTATTTTCCAGCTGGAACT
 
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JMFS111G08+           TCAATCCAATTTCCACCAACAACGCCGCAATCAATCATAAAGCGAAGAGCGAAGAGAACA
JMSF042E14+                     TTCCACCAACAACGCCGCAATCAATCATAAAGCGAAGAGCGAAGAGAACA
                      ____________________________________________________________
consensus             TCAATCCAATTTCCACCAACAACGCCGCAATCAATCATAAAGCGAAGAGCGAAGAGAACA
 
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JMFS111G08+           TTACTTTCATATGTCATGAAACTCTTCATACCAAGTCCATCAATTTGAATACCCCTATCA
JMSF041O11+                                          CAAGTCCATCAATTTGAATACCCCTATCA
JMSF042E14+           TTACTTTCATATGTCATGAAACTCTTCATACCAAGTCCATCAATTTGAATACCCCTATCA
                      ____________________________________________________________
consensus             TTACTTTCATATGTCATGAAACTCTTCATACCAAGTCCATCAATTTGAATACCCCTATCA
 
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JMFS111G08+           AGTATACCACGGCATGTGGTAACCATTGTTGGCAATGCCACTACAATTTTA         
JMFS033A12+                                                                 AAAGGT
JMSF044A24+                                        TGGCAATGCCACTACAATTTTAAGAAAAGGT
JMSF041O11+           AGTATACCACGGCATGTGGTAACCATTGTTGGCAATGCCACTACAATTTTAAGAAAAGGT
JMSF042E14+           AGTATACCACGGCATGTGGTAACCATTGTTGGCAATGCCACTACAATTTTAAGAAAAGGT
                      ____________________________________________________________
consensus             AGTATACCACGGCATGTGGTAACCATTGTTGGCAATGCCACTACAATTTTAAGAAAAGGT
 
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JMFS033A12+           TGAGAACCCTGCTGCTGGTAATACATAATACTTCTCTTCTGGA-CCATTTCAATGCGACG
JMSF044A24+           TGAGAACCCTGCTGCTGGTAATACATAATACTTCTCTTCTGGA-CCATTTCAATGCGACG
JMSF041O11+           TGAGAACCCTGCTGCTGGTAATACATAATACTTCTCTTCTGGA-CCATTTCAATGCGACG
JMSF042E14+           TGAGAACCCTGCTGCTGGTAATACATAATACTTCTCTTCTGGACCCATTTCAATGCGACG
                      ____________________________________________________________
consensus             TGAGAACCCTGCTGCTGGTAATACATAATACTTCTCTTCTGGA-CCATTTCAATGCGACG
 
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JMFS033A12+           GACAAACTTAGGAACCCTATTGTTCCTATTTGCCTCTCTCATTCTATCCTCAAGAATTTG
JMSF044A24+           GACAAACTTAGGAACCCTATTGTTCCTATTTGCCTCTCTCATTCTATCCTCAAGAATTTG
JMSF041O11+           GACAAACTTAGGAACCCTATTGTTCCTATTTGCCTCTCTCATTCTATCCTCAAGAATTTG
JMSF042E14+           GACAAACTTAGGAACCCTATTGTTCCTATTTGCCTCTCTCATTCTATCCTCAAGAATTTG
                      ____________________________________________________________
consensus             GACAAACTTAGGAACCCTATTGTTCCTATTTGCCTCTCTCATTCTATCCTCAAGAATTTG
 
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JMFS033A12+           ATGAAAACGAGATATGTCATCAGGACCCATTCCTGCAGGGCAACTGATATAGAAATATGG
JMSF044A24+           ATGAAAACGAGATATGTCATCAGGACCCATTCCTGCAGGGCAACTGATATAGAAATATGG
JMSF041O11+           ATGAAAACGAGATATGTCATCAGGACCCATTCCTGCAGGGCAACTGATATAGAAATATGG
JMSF042E14+           ATGAAAACGAGATATGTCATCAGGACCCATTCCNGCAGGGCAACTGATATAGAAATATGG
                      ____________________________________________________________
consensus             ATGAAAACGAGATATGTCATCAGGACCCATTCCTGCAGGGCAACTGATATAGAAATATGG
 
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JMFS033A12+           TTCAAATCCATGTACATGACAACAAACACTGTGACCTTCCTTAGTAACTCCAAATATTCT
JMSF044A24+           TTCAAATCCATGTACATGACAACAAACACTGTGACCTTCCTTAGTAACTCCAAATATTCT
JMSF041O11+           TTCAAATCCATGTACATGACAACAAACACTGTGACCTTCCTTAGTAACTCCAAATATTCT
JMSF042E14+           TTCAAATCCATGTACATGACAACAAACACTGTGACCTTCCTTAGTAACTCCAAATATTCT
                      ____________________________________________________________
consensus             TTCAAATCCATGTACATGACAACAAACACTGTGACCTTCCTTAGTAACTCCAAATATTCT
 
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JMFS033A12+           TATAATGGCAGCAGGACCAGAAGAATTAGGCAGCAATTCTTTATGGCTCTCCCCAATCAC
JMSF044A24+           TATAATGGCAGCAGGACCAGAAGAATTAGGCAGCAATTCTTTATGGCTCTCCCCAATCAC
JMSF041O11+           TATAATGGCAGCAGGACCAGAAGAATTAGGCAGCAATTCTTTATGGCTCTCCCCAATCAC
JMSF042E14+           NATAATGGCAGCAGGACCAGAAGAATTAGGCAGCAATTCTTTATGGCTCTCCCCAATCAC
                      ____________________________________________________________
consensus             TATAATGGCAGCAGGACCAGAAGAATTAGGCAGCAATTCTTTATGGCTCTCCCCAATCAC
 
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JMFS033A12+           GTAGTCAATTTCCAATTGCTGAAATACTACGCTTTGCGACTGTGAGAGGTAAGCTTGCGA
JMSF044A24+           GTAGTCAATTTCCAATTGCTGAAATACTACGCTTTGCGACTGTGAGAGGTAAGCTTGCGA
JMSF041O11+           GTAGCCAATTTCCAATTGCTGAAATACTACGCTTTGCGACTGTGAGAGGTAAGCTTGCGA
JMSF042E14+           GTAGCCAATTTCCAATTGCTGAAATANTACGCTTTGCGACTGTGAGAGGTAAGCTTGCGA
                      ____________________________________________________________
consensus             GTAGTCAATTTCCAATTGCTGAAATACTACGCTTTGCGACTGTGAGAGGTAAGCTTGCGA
 
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JMFS033A12+           AAGCTGAGGCCGCTTCCATTTGCGGAGACGCTCGGCGAGGGCGGATTGCTCCTCGAGCTC
JMSF044A24+           AAGCTGAGGCCGCTTCCATTTGCGGAGACGCTCGGCGAGGGCGGATTGCTCCTCGAGCTC
JMSF041O11+           AAGCTGAGGCCGCTTCCATTTGCGGAGACGCTCGGCGAGGGCGGATTGCTCCTCGAGCTC
JMSF042E14+           AAGCTGAGGCCGCTTCCATTTGCGGAGACGCTCGGCGAGGGCGGATTGCTCCTCGAGCTC
                      ____________________________________________________________
consensus             AAGCTGAGGCCGCTTCCATTTGCGGAGACGCTCGGCGAGGGCGGATTGCTCCTCGAGCTC
 
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JMFS033A12+           GCGAAGGACCTGGGAGTCCTCATCGTACTGAAGCAATGTTTCTTCGAGGAAGATGTCTTC
JMSF044A24+           GCGAAGGACCTGGGAGTCCTCATCGTACTGAAGCAATGTTTCTTCGAGGAAGATGTCTTC
JMSF041O11+           GCGAAGGACCTGGGAGTCCTCATCGTACTGAAGCAATGTTTCTTCGAGGAAGATGTCTTC
JMSF042E14+           GCGAAGGNCCTGGGAGTCCTCATCGTACTGAAGCAATGTTTCTTCGAGGAAGATGTCTTC
                      ____________________________________________________________
consensus             GCGAAGGACCTGGGAGTCCTCATCGTACTGAAGCAATGTTTCTTCGAGGAAGATGTCTTC
 
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JMFS033A12+           ATCGACGTCCTCCTCTTCCACGGCAGCCTGTTGTTTCTTCTGCAGCTGCGGCGACGGTGC
JMSF044A24+           ATCGACGTCCTCCTCTTCCACGGCAGCCTGTTGTTTCTTCTGCAGCTGCGGCGACGGTGC
JMSF041O11+           ATCGACGTCCTCCTCTTCCACGGCAGCCTGTTGTTTCTTCTGCAGCTGCGGCGACGGTGC
JMSF042E14+           ATNGACGTCCTCCTCTTCCACGGCAGCCTGTTGTTTCTTCNGCAGCTGCGGCGACGGTGC
                      ____________________________________________________________
consensus             ATCGACGTCCTCCTCTTCCACGGCAGCCTGTTGTTTCTTCTGCAGCTGCGGCGACGGTGC
 
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JMFS033A12+           CGGCGCCGACTGTTGTCGCTTCCGAGGATTGCCGCTGCTCATAGTGGACCTGAGAATTCA
JMSF044A24+           CGGCGCCGACTGTTGTCGCTTCCGAGGATTGCCGCTGCTCATAGTGGACCTGAGAATTCA
JMSF041O11+           CGGCGCCGACTGTTGTCGCTTCCGAGGATTGCCGCTGCTCATAGTGGACCTGAGAATTCA
JMSF042E14+           CGGCGCCGACNGTTGTCGCTTCCGAGGATTGCCGCTGCTCATAGTGGACCTGAGAATTCA
                      ____________________________________________________________
consensus             CGGCGCCGACTGTTGTCGCTTCCGAGGATTGCCGCTGCTCATAGTGGACCTGAGAATTCA
 
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JMFS033A12+           AGAGGAGTGGGTTGGGGAGAAAGGAGGGAAAGGGT                         
JMSF044A24+           AGAGGAGTGGGTTGGGGAGAAAGGAGGGAAAGGGTTAACGAGTTTCCCGCCAGTTCTG  
JMSF041O11+           AGAGGAGTGGGTTGGGGAGAAAGGAGGGAAAGGGTTAACGAGTTTCCCGCCAGTTCTG  
JMSF042E14+           AGAGGAGTGGGTTGGGGAGAAAGGAGGGAAAGGGTNAACGAGTTTCCCGCCAGTTCTGCC
                      ____________________________________________________________
consensus             AGAGGAGTGGGTTGGGGAGAAAGGAGGGAAAGGGTTAACGAGTTTCCCGCCAGTTCTGCC